RNA–Protein interactions for RNA: ENST00000540960.1

CHD4-208, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

TSL 5

Gene CHD4, Length 892 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-208ENST00000540960 ANP32DO95626 131 aa7.96□□□□□ -1.14
CHD4-208ENST00000540960 TNFP01375 233 aa7.96□□□□□ -1.14
CHD4-208ENST00000540960 PGRP06401 933 aa7.96□□□□□ -1.14
CHD4-208ENST00000540960 BCKDHAP12694 445 aa7.96□□□□□ -1.14
CHD4-208ENST00000540960 ANPEPP15144 967 aa7.96□□□□□ -1.14
CHD4-208ENST00000540960 ACADSP16219 412 aa7.96□□□□□ -1.14
CHD4-208ENST00000540960 NPPBP16860 134 aa7.96□□□□□ -1.14
CHD4-208ENST00000540960 EPORP19235 508 aa7.96□□□□□ -1.14
CHD4-208ENST00000540960 PDHA2P29803 388 aa7.96□□□□□ -1.14
CHD4-208ENST00000540960 KIR3DL1P43629 444 aa7.96□□□□□ -1.14
CHD4-208ENST00000540960 BDKRB1P46663 353 aa7.96□□□□□ -1.14
CHD4-208ENST00000540960 CLCN2P51788 898 aa7.96□□□□□ -1.14
CHD4-208ENST00000540960 UFM1P61960 85 aa7.96□□□□□ -1.14
CHD4-208ENST00000540960 TBPL1P62380 186 aa7.96□□□□□ -1.14
CHD4-208ENST00000540960 ILF3Q12906 894 aaKnown RBP eCLIP7.96□□□□□ -1.143e-6■■□□□ 11.7
CHD4-208ENST00000540960 NFE2L1Q14494 772 aa7.96□□□□□ -1.14
CHD4-208ENST00000540960 C18orf21Q32NC0 220 aaPredicted RBP7.96□□□□□ -1.14
CHD4-208ENST00000540960 RFTN2Q52LD8 501 aaPredicted RBP7.96□□□□□ -1.14
CHD4-208ENST00000540960 PYCR3Q53H96 274 aa7.96□□□□□ -1.14
CHD4-208ENST00000540960 PRRT3Q5FWE3 981 aa7.96□□□□□ -1.14
CHD4-208ENST00000540960 NOXRED1Q6NXP6 359 aa7.96□□□□□ -1.14
CHD4-208ENST00000540960 C8orf82Q6P1X6 216 aaPredicted RBP7.96□□□□□ -1.14
CHD4-208ENST00000540960 ABRAXAS1Q6UWZ7 409 aa7.96□□□□□ -1.14
CHD4-208ENST00000540960 TMIGD1Q6UXZ0 262 aa7.96□□□□□ -1.14
CHD4-208ENST00000540960 MBOAT1Q6ZNC8 495 aa7.96□□□□□ -1.14
CHD4-208ENST00000540960 DHDDSQ86SQ9 333 aa7.96□□□□□ -1.14
CHD4-208ENST00000540960 TRIM74Q86UV6 250 aa7.96□□□□□ -1.14
CHD4-208ENST00000540960 GPR180Q86V85 440 aa7.96□□□□□ -1.14
CHD4-208ENST00000540960 HPS6Q86YV9 775 aa7.96□□□□□ -1.14
CHD4-208ENST00000540960 SFTPA2Q8IWL1 248 aa7.96□□□□□ -1.14
CHD4-208ENST00000540960 LIX1Q8N485 282 aa7.96□□□□□ -1.14
CHD4-208ENST00000540960 PLA2G15Q8NCC3 412 aa7.96□□□□□ -1.14
CHD4-208ENST00000540960 ABHD11Q8NFV4 315 aa7.96□□□□□ -1.14
CHD4-208ENST00000540960 OR7G3Q8NG95 312 aa7.96□□□□□ -1.14
CHD4-208ENST00000540960 OR2L8Q8NGY9 312 aa7.96□□□□□ -1.14
CHD4-208ENST00000540960 OR2T11Q8NH01 316 aa7.96□□□□□ -1.14
CHD4-208ENST00000540960 WDR20Q8TBZ3 569 aa7.96□□□□□ -1.14
CHD4-208ENST00000540960 PROKR1Q8TCW9 393 aa7.96□□□□□ -1.14
CHD4-208ENST00000540960 WDR60Q8WVS4 1066 aa7.96□□□□□ -1.14
CHD4-208ENST00000540960 CCDC124Q96CT7 223 aaKnown RBP7.96□□□□□ -1.14
CHD4-208ENST00000540960 GBP5Q96PP8 586 aa7.96□□□□□ -1.14
CHD4-208ENST00000540960 OR52E6Q96RD3 313 aa7.96□□□□□ -1.14
CHD4-208ENST00000540960 FERD3LQ96RJ6 166 aa7.96□□□□□ -1.14
CHD4-208ENST00000540960 KCTD14Q9BQ13 255 aaPredicted RBP7.96□□□□□ -1.14
CHD4-208ENST00000540960 GSDMCQ9BYG8 508 aa7.96□□□□□ -1.14
CHD4-208ENST00000540960 ACPTQ9BZG2 426 aa7.96□□□□□ -1.14
CHD4-208ENST00000540960 SPRY4Q9C004 299 aa7.96□□□□□ -1.14
CHD4-208ENST00000540960 RHBGQ9H310 441 aa7.96□□□□□ -1.14
CHD4-208ENST00000540960 OSGEPL1Q9H4B0 414 aa7.96□□□□□ -1.14
CHD4-208ENST00000540960 RAD21L1Q9H4I0 556 aa7.96□□□□□ -1.14
CHD4-208ENST00000540960 KIR3DX1Q9H7L2 352 aa7.96□□□□□ -1.14
CHD4-208ENST00000540960 INTS7Q9NVH2 962 aaKnown RBP7.96□□□□□ -1.14
CHD4-208ENST00000540960 OR6C2Q9NZP2 312 aa7.96□□□□□ -1.14
CHD4-208ENST00000540960 ACTR3BQ9P1U1 418 aa7.96□□□□□ -1.14
CHD4-208ENST00000540960 ADAM29Q9UKF5 820 aa7.96□□□□□ -1.14
CHD4-208ENST00000540960 PCDHGB4Q9UN71 923 aa7.96□□□□□ -1.14
CHD4-208ENST00000540960 SNX7Q9UNH6 387 aa7.96□□□□□ -1.14
CHD4-208ENST00000540960 PSMD13Q9UNM6 376 aa7.96□□□□□ -1.14
CHD4-208ENST00000540960 ZFR2Q9UPR6 939 aaKnown RBP7.96□□□□□ -1.14
CHD4-208ENST00000540960 POLR3HQ9Y535 204 aaPredicted RBP7.96□□□□□ -1.14
CHD4-208ENST00000540960 ASB1Q9Y576 335 aa7.96□□□□□ -1.14
CHD4-208ENST00000540960 PCDHGA3Q9Y5H0 932 aa7.96□□□□□ -1.14
CHD4-208ENST00000540960 FLNAP21333 2647 aaKnown RBP7.96□□□□□ -1.14
CHD4-208ENST00000540960 A0A096LPI6 279 aa7.95□□□□□ -1.14
CHD4-208ENST00000540960 PRSS38A1L453 326 aa7.95□□□□□ -1.14
CHD4-208ENST00000540960 PIPSLA2A3N6 862 aa7.95□□□□□ -1.14
CHD4-208ENST00000540960 PDZK1P1A8MUH7 402 aa7.95□□□□□ -1.14
CHD4-208ENST00000540960 LMO7DNF2Z398 122 aa7.95□□□□□ -1.14
CHD4-208ENST00000540960 H0YJX3 145 aa7.95□□□□□ -1.14
CHD4-208ENST00000540960 ANKRD28O15084 1053 aa7.95□□□□□ -1.14
CHD4-208ENST00000540960 PDE5AO76074 875 aa7.95□□□□□ -1.14
CHD4-208ENST00000540960 RASGRP1O95267 797 aa7.95□□□□□ -1.14
CHD4-208ENST00000540960 BAG2O95816 211 aa7.95□□□□□ -1.14
CHD4-208ENST00000540960 CEACAM5P06731 702 aa7.95□□□□□ -1.14
CHD4-208ENST00000540960 MTHFD1P11586 935 aaKnown RBP7.95□□□□□ -1.14
CHD4-208ENST00000540960 PCNAP12004 261 aa7.95□□□□□ -1.14
CHD4-208ENST00000540960 ACP5P13686 325 aa7.95□□□□□ -1.14
CHD4-208ENST00000540960 AMD1P17707 334 aa7.95□□□□□ -1.14
CHD4-208ENST00000540960 CAPN3P20807 821 aa7.95□□□□□ -1.14
CHD4-208ENST00000540960 PSMA4P25789 261 aaKnown RBP7.95□□□□□ -1.14
CHD4-208ENST00000540960 HTR1EP28566 365 aa7.95□□□□□ -1.14
CHD4-208ENST00000540960 CMPK1P30085 196 aa7.95□□□□□ -1.14
CHD4-208ENST00000540960 SLC7A1P30825 629 aa7.95□□□□□ -1.14
CHD4-208ENST00000540960 IGFALSP35858 605 aa7.95□□□□□ -1.14
CHD4-208ENST00000540960 MAGEA8P43361 318 aa7.95□□□□□ -1.14
CHD4-208ENST00000540960 TSFMP43897 325 aaKnown RBP7.95□□□□□ -1.14
CHD4-208ENST00000540960 PTDSS1P48651 473 aaKnown RBP7.95□□□□□ -1.14
CHD4-208ENST00000540960 HTR6P50406 440 aa7.95□□□□□ -1.14
CHD4-208ENST00000540960 SLC7A2P52569 658 aa7.95□□□□□ -1.14
CHD4-208ENST00000540960 TRA2BP62995 288 aaKnown RBP7.95□□□□□ -1.14
CHD4-208ENST00000540960 RELAQ04206 551 aa7.95□□□□□ -1.14
CHD4-208ENST00000540960 ERV3-1Q14264 604 aa7.95□□□□□ -1.14
CHD4-208ENST00000540960 SLBPQ14493 270 aaKnown RBP eCLIP7.95□□□□□ -1.14
CHD4-208ENST00000540960 KIAA0040Q15053 153 aa7.95□□□□□ -1.14
CHD4-208ENST00000540960 TLR1Q15399 786 aa7.95□□□□□ -1.14
CHD4-208ENST00000540960 TIGD2Q4W5G0 525 aa7.95□□□□□ -1.14
CHD4-208ENST00000540960 FBXO48Q5FWF7 155 aa7.95□□□□□ -1.14
CHD4-208ENST00000540960 SWT1Q5T5J6 900 aaKnown RBP7.95□□□□□ -1.14
CHD4-208ENST00000540960 WLSQ5T9L3 541 aa7.95□□□□□ -1.14
CHD4-208ENST00000540960 ERICH5Q6P6B1 374 aa7.95□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms