RNA–Protein interactions for RNA: ENST00000540904.1

SNHG1-215, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 5

Gene SNHG1, Length 594 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-215ENST00000540904 KRT6BP04259 564 aa8.65□□□□□ -1.02
SNHG1-215ENST00000540904 IFNA16P05015 189 aa8.65□□□□□ -1.02
SNHG1-215ENST00000540904 CPN2P22792 545 aa8.65□□□□□ -1.02
SNHG1-215ENST00000540904 PPP2R1BP30154 601 aa8.65□□□□□ -1.02
SNHG1-215ENST00000540904 HMOX2P30519 316 aa8.65□□□□□ -1.02
SNHG1-215ENST00000540904 BSGP35613 385 aa8.65□□□□□ -1.02
SNHG1-215ENST00000540904 TSFMP43897 325 aaKnown RBP8.65□□□□□ -1.02
SNHG1-215ENST00000540904 KRT6CP48668 564 aa8.65□□□□□ -1.02
SNHG1-215ENST00000540904 PKNOX1P55347 436 aa8.65□□□□□ -1.02
SNHG1-215ENST00000540904 SLC26A5P58743 744 aa8.65□□□□□ -1.02
SNHG1-215ENST00000540904 DNAJB13P59910 316 aa8.65□□□□□ -1.02
SNHG1-215ENST00000540904 TLE1Q04724 770 aa8.65□□□□□ -1.02
SNHG1-215ENST00000540904 MFAP5Q13361 173 aa8.65□□□□□ -1.02
SNHG1-215ENST00000540904 CRB2Q5IJ48 1285 aa8.65□□□□□ -1.02
SNHG1-215ENST00000540904 TCHHL1Q5QJ38 904 aaPredicted RBP8.65□□□□□ -1.02
SNHG1-215ENST00000540904 B3GNTL1Q67FW5 361 aaPredicted RBP8.65□□□□□ -1.02
SNHG1-215ENST00000540904 SLC6A19Q695T7 634 aa8.65□□□□□ -1.02
SNHG1-215ENST00000540904 JMJD6Q6NYC1 403 aaPredicted RBP8.65□□□□□ -1.02
SNHG1-215ENST00000540904 CYP20A1Q6UW02 462 aa8.65□□□□□ -1.02
SNHG1-215ENST00000540904 IGFL3Q6UXB1 125 aa8.65□□□□□ -1.02
SNHG1-215ENST00000540904 GPR180Q86V85 440 aa8.65□□□□□ -1.02
SNHG1-215ENST00000540904 SCUBE1Q8IWY4 988 aa8.65□□□□□ -1.02
SNHG1-215ENST00000540904 MYRIPQ8NFW9 859 aa8.65□□□□□ -1.02
SNHG1-215ENST00000540904 METTL6Q8TCB7 284 aa8.65□□□□□ -1.02
SNHG1-215ENST00000540904 PSMF1Q92530 271 aa8.65□□□□□ -1.02
SNHG1-215ENST00000540904 SMC6Q96SB8 1091 aa8.65□□□□□ -1.02
SNHG1-215ENST00000540904 ZNF717Q9BY31 904 aaPredicted RBP8.65□□□□□ -1.02
SNHG1-215ENST00000540904 MRPL1Q9BYD6 325 aaKnown RBP8.65□□□□□ -1.02
SNHG1-215ENST00000540904 CENPHQ9H3R5 247 aa8.65□□□□□ -1.02
SNHG1-215ENST00000540904 GSTO2Q9H4Y5 243 aa8.65□□□□□ -1.02
SNHG1-215ENST00000540904 DDX31Q9H8H2 851 aaKnown RBP8.65□□□□□ -1.02
SNHG1-215ENST00000540904 KCNK13Q9HB14 408 aa8.65□□□□□ -1.02
SNHG1-215ENST00000540904 MID1IP1Q9NPA3 183 aa8.65□□□□□ -1.02
SNHG1-215ENST00000540904 SLAMF7Q9NQ25 335 aa8.65□□□□□ -1.02
SNHG1-215ENST00000540904 OXSMQ9NWU1 459 aa8.65□□□□□ -1.02
SNHG1-215ENST00000540904 MKS1Q9NXB0 559 aa8.65□□□□□ -1.02
SNHG1-215ENST00000540904 SLC17A7Q9P2U7 560 aa8.65□□□□□ -1.02
SNHG1-215ENST00000540904 MID2Q9UJV3 735 aa8.65□□□□□ -1.02
SNHG1-215ENST00000540904 PPT2Q9UMR5 302 aa8.65□□□□□ -1.02
SNHG1-215ENST00000540904 B3GNT3Q9Y2A9 372 aa8.65□□□□□ -1.02
SNHG1-215ENST00000540904 STK38LQ9Y2H1 464 aa8.65□□□□□ -1.02
SNHG1-215ENST00000540904 ATG4BQ9Y4P1 393 aa8.65□□□□□ -1.02
SNHG1-215ENST00000540904 CSAG2Q9Y5P2 127 aa8.65□□□□□ -1.02
SNHG1-215ENST00000540904 SMG1Q96Q15 3661 aaKnown RBP8.65□□□□□ -1.02
SNHG1-215ENST00000540904 MED13Q9UHV7 2174 aa8.65□□□□□ -1.03
SNHG1-215ENST00000540904 A0A0A6YYD5 115 aa8.64□□□□□ -1.03
SNHG1-215ENST00000540904 ARHGAP10A1A4S6 786 aa8.64□□□□□ -1.03
SNHG1-215ENST00000540904 SAGE2PA6NJ88 616 aa8.64□□□□□ -1.03
SNHG1-215ENST00000540904 TTLL8A6PVC2 850 aa8.64□□□□□ -1.03
SNHG1-215ENST00000540904 MANBAO00462 879 aa8.64□□□□□ -1.03
SNHG1-215ENST00000540904 UBFD1O14562 309 aaKnown RBP8.64□□□□□ -1.03
SNHG1-215ENST00000540904 TMPRSS11DO60235 418 aa8.64□□□□□ -1.03
SNHG1-215ENST00000540904 CTNSO60931 367 aa8.64□□□□□ -1.03
SNHG1-215ENST00000540904 LDB3O75112 727 aa8.64□□□□□ -1.03
SNHG1-215ENST00000540904 ULK1O75385 1050 aa8.64□□□□□ -1.03
SNHG1-215ENST00000540904 PRKRAO75569 313 aaKnown RBP8.64□□□□□ -1.03
SNHG1-215ENST00000540904 CRCPO75575 148 aa8.64□□□□□ -1.03
SNHG1-215ENST00000540904 SEMA3DO95025 777 aa8.64□□□□□ -1.03
SNHG1-215ENST00000540904 ESRRBO95718 433 aa8.64□□□□□ -1.03
SNHG1-215ENST00000540904 F10P00742 488 aa8.64□□□□□ -1.03
SNHG1-215ENST00000540904 KLK1P06870 262 aa8.64□□□□□ -1.03
SNHG1-215ENST00000540904 FAM58BPP0C7Q3 252 aa8.64□□□□□ -1.03
SNHG1-215ENST00000540904 CREB1P16220 341 aa8.64□□□□□ -1.03
SNHG1-215ENST00000540904 TLX1P31314 330 aaPredicted RBP8.64□□□□□ -1.03
SNHG1-215ENST00000540904 SOX11P35716 441 aa8.64□□□□□ -1.03
SNHG1-215ENST00000540904 BUD31P41223 144 aaPredicted RBP8.64□□□□□ -1.03
SNHG1-215ENST00000540904 ARFIP1P53367 373 aa8.64□□□□□ -1.03
SNHG1-215ENST00000540904 MLLT10P55197 1068 aa8.64□□□□□ -1.03
SNHG1-215ENST00000540904 HNRNPH2P55795 449 aaKnown RBP8.64□□□□□ -1.03
SNHG1-215ENST00000540904 TNFRSF17Q02223 184 aa8.64□□□□□ -1.03
SNHG1-215ENST00000540904 ID2Q02363 134 aa8.64□□□□□ -1.03
SNHG1-215ENST00000540904 ZNF33BQ06732 778 aa8.64□□□□□ -1.03
SNHG1-215ENST00000540904 STX4Q12846 297 aa8.64□□□□□ -1.03
SNHG1-215ENST00000540904 PLEKHN1Q494U1 663 aaPredicted RBP8.64□□□□□ -1.03
SNHG1-215ENST00000540904 CEP85LQ5SZL2 805 aa8.64□□□□□ -1.03
SNHG1-215ENST00000540904 ABHD17BQ5VST6 288 aa8.64□□□□□ -1.03
SNHG1-215ENST00000540904 LIPMQ5VYY2 423 aa8.64□□□□□ -1.03
SNHG1-215ENST00000540904 C18orf63Q68DL7 685 aa8.64□□□□□ -1.03
SNHG1-215ENST00000540904 FCRLBQ6BAA4 426 aa8.64□□□□□ -1.03
SNHG1-215ENST00000540904 IGFL2Q6UWQ7 119 aa8.64□□□□□ -1.03
SNHG1-215ENST00000540904 FRMD7Q6ZUT3 714 aa8.64□□□□□ -1.03
SNHG1-215ENST00000540904 NUDT13Q86X67 352 aa8.64□□□□□ -1.03
SNHG1-215ENST00000540904 C10orf107Q8IVU9 208 aa8.64□□□□□ -1.03
SNHG1-215ENST00000540904 IQCKQ8N0W5 287 aa8.64□□□□□ -1.03
SNHG1-215ENST00000540904 ZCCHC7Q8N3Z6 543 aaKnown RBP8.64□□□□□ -1.03
SNHG1-215ENST00000540904 KIF2BQ8N4N8 673 aa8.64□□□□□ -1.03
SNHG1-215ENST00000540904 DNAJB14Q8TBM8 379 aa8.64□□□□□ -1.03
SNHG1-215ENST00000540904 M1APQ8TC57 530 aa8.64□□□□□ -1.03
SNHG1-215ENST00000540904 AGAP11Q8TF27 550 aa8.64□□□□□ -1.03
SNHG1-215ENST00000540904 PNPLA2Q96AD5 504 aa8.64□□□□□ -1.03
SNHG1-215ENST00000540904 CNDP1Q96KN2 507 aa8.64□□□□□ -1.03
SNHG1-215ENST00000540904 FAM111AQ96PZ2 611 aa8.64□□□□□ -1.03
SNHG1-215ENST00000540904 KCNA7Q96RP8 456 aa8.64□□□□□ -1.03
SNHG1-215ENST00000540904 LMF1Q96S06 567 aa8.64□□□□□ -1.03
SNHG1-215ENST00000540904 MECRQ9BV79 373 aa8.64□□□□□ -1.03
SNHG1-215ENST00000540904 ALOXE3Q9BYJ1 711 aa8.64□□□□□ -1.03
SNHG1-215ENST00000540904 SLC29A3Q9BZD2 475 aa8.64□□□□□ -1.03
SNHG1-215ENST00000540904 SHCBP1LQ9BZQ2 653 aa8.64□□□□□ -1.03
SNHG1-215ENST00000540904 ILKAPQ9H0C8 392 aaPredicted RBP8.64□□□□□ -1.03
SNHG1-215ENST00000540904 RPF2Q9H7B2 306 aaKnown RBP8.64□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms