RNA–Protein interactions for RNA: ENST00000540805.5

PROM1-220, Transcript of prominin 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene PROM1, Length 3,908 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PROM1-220ENST00000540805 TSSK3Q96PN8 268 aa5.03□□□□□ -1.6
PROM1-220ENST00000540805 TRNT1Q96Q11 434 aaKnown RBP5.03□□□□□ -1.6
PROM1-220ENST00000540805 KCNS3Q9BQ31 491 aa5.03□□□□□ -1.6
PROM1-220ENST00000540805 USB1Q9BQ65 265 aaKnown RBP5.03□□□□□ -1.6
PROM1-220ENST00000540805 REEP1Q9H902 201 aa5.03□□□□□ -1.6
PROM1-220ENST00000540805 SMURF1Q9HCE7 757 aa5.03□□□□□ -1.6
PROM1-220ENST00000540805 FNIP2Q9P278 1114 aa5.03□□□□□ -1.6
PROM1-220ENST00000540805 PSORS1C1Q9UIG5 152 aa5.03□□□□□ -1.6
PROM1-220ENST00000540805 SNX7Q9UNH6 387 aa5.03□□□□□ -1.6
PROM1-220ENST00000540805 KLHL20Q9Y2M5 609 aa5.03□□□□□ -1.6
PROM1-220ENST00000540805 MRPS7Q9Y2R9 242 aaKnown RBP5.03□□□□□ -1.6
PROM1-220ENST00000540805 CFAP20Q9Y6A4 193 aaKnown RBP5.03□□□□□ -1.6
PROM1-220ENST00000540805 A0A0B4J293 547 aa5.02□□□□□ -1.61
PROM1-220ENST00000540805 LOC285095A0A1B0GVY8 99 aa5.02□□□□□ -1.61
PROM1-220ENST00000540805 WWP2O00308 870 aa5.02□□□□□ -1.61
PROM1-220ENST00000540805 RGS5O15539 181 aa5.02□□□□□ -1.61
PROM1-220ENST00000540805 ARHGEF9O43307 516 aa5.02□□□□□ -1.61
PROM1-220ENST00000540805 PEX14O75381 377 aa5.02□□□□□ -1.61
PROM1-220ENST00000540805 ERN1O75460 977 aaKnown RBP5.02□□□□□ -1.61
PROM1-220ENST00000540805 OR6A2O95222 327 aa5.02□□□□□ -1.61
PROM1-220ENST00000540805 COX7A2P14406 83 aa5.02□□□□□ -1.61
PROM1-220ENST00000540805 KELP23276 732 aa5.02□□□□□ -1.61
PROM1-220ENST00000540805 RAB25P57735 213 aa5.02□□□□□ -1.61
PROM1-220ENST00000540805 OLR1P78380 273 aa5.02□□□□□ -1.61
PROM1-220ENST00000540805 BNC1Q01954 994 aa5.02□□□□□ -1.61
PROM1-220ENST00000540805 POU4F3Q15319 338 aa5.02□□□□□ -1.61
PROM1-220ENST00000540805 TIMM50Q3ZCQ8 353 aa5.02□□□□□ -1.61
PROM1-220ENST00000540805 AFTPHQ6ULP2 937 aa5.02□□□□□ -1.61
PROM1-220ENST00000540805 SIDT2Q8NBJ9 832 aaKnown RBP5.02□□□□□ -1.61
PROM1-220ENST00000540805 TTLQ8NG68 377 aa5.02□□□□□ -1.61
PROM1-220ENST00000540805 SLC7A6Q92536 515 aa5.02□□□□□ -1.61
PROM1-220ENST00000540805 MYO19Q96H55 970 aa5.02□□□□□ -1.61
PROM1-220ENST00000540805 IL1RAPQ9NPH3 570 aa5.02□□□□□ -1.61
PROM1-220ENST00000540805 MED16Q9Y2X0 877 aa5.02□□□□□ -1.61
PROM1-220ENST00000540805 HS3ST4Q9Y661 456 aa5.02□□□□□ -1.61
PROM1-220ENST00000540805 TRBV5-3A0A0A0MS03 114 aa5.02□□□□□ -1.61
PROM1-220ENST00000540805 A0A1B0GVM2 712 aa5.02□□□□□ -1.61
PROM1-220ENST00000540805 ABHD14A-ACY1A0A1B0GW23 586 aa5.02□□□□□ -1.61
PROM1-220ENST00000540805 LRRC72A6NJI9 287 aa5.02□□□□□ -1.61
PROM1-220ENST00000540805 WASH4PA8MWX3 477 aa5.02□□□□□ -1.61
PROM1-220ENST00000540805 WNT9AO14904 365 aa5.02□□□□□ -1.61
PROM1-220ENST00000540805 KIAA0513O60268 411 aa5.02□□□□□ -1.61
PROM1-220ENST00000540805 ZNF780AO75290 641 aaPredicted RBP5.02□□□□□ -1.61
PROM1-220ENST00000540805 OTCP00480 354 aa5.02□□□□□ -1.61
PROM1-220ENST00000540805 STATHP02808 62 aa5.02□□□□□ -1.61
PROM1-220ENST00000540805 CA3P07451 260 aa5.02□□□□□ -1.61
PROM1-220ENST00000540805 ADORA3P0DMS8 318 aa5.02□□□□□ -1.61
PROM1-220ENST00000540805 IDSP22304 550 aa5.02□□□□□ -1.61
PROM1-220ENST00000540805 AQP1P29972 269 aa5.02□□□□□ -1.61
PROM1-220ENST00000540805 PKLRP30613 574 aa5.02□□□□□ -1.61
PROM1-220ENST00000540805 TLX1P31314 330 aaPredicted RBP5.02□□□□□ -1.61
PROM1-220ENST00000540805 SLC19A1P41440 591 aa5.02□□□□□ -1.61
PROM1-220ENST00000540805 CRATP43155 626 aa5.02□□□□□ -1.61
PROM1-220ENST00000540805 CTSOP43234 321 aaPredicted RBP5.02□□□□□ -1.61
PROM1-220ENST00000540805 SSR2P43308 183 aa5.02□□□□□ -1.61
PROM1-220ENST00000540805 MAPK8P45983 427 aa5.02□□□□□ -1.61
PROM1-220ENST00000540805 TTPAP49638 278 aa5.02□□□□□ -1.61
PROM1-220ENST00000540805 MNX1P50219 401 aaPredicted RBP5.02□□□□□ -1.61
PROM1-220ENST00000540805 ANXA11P50995 505 aaKnown RBP5.02□□□□□ -1.61
PROM1-220ENST00000540805 B2MP61769 119 aa5.02□□□□□ -1.61
PROM1-220ENST00000540805 SKP1P63208 163 aa5.02□□□□□ -1.61
PROM1-220ENST00000540805 KHDRBS1Q07666 443 aaKnown RBP eCLIP5.02□□□□□ -1.61
PROM1-220ENST00000540805 HYAL2Q12891 473 aa5.02□□□□□ -1.61
PROM1-220ENST00000540805 GTF2H2Q13888 395 aa5.02□□□□□ -1.61
PROM1-220ENST00000540805 IHHQ14623 411 aa5.02□□□□□ -1.61
PROM1-220ENST00000540805 FLYWCH1Q4VC44 716 aa5.02□□□□□ -1.61
PROM1-220ENST00000540805 LY6G5CQ5SRR4 150 aa5.02□□□□□ -1.61
PROM1-220ENST00000540805 ZNF648Q5T619 568 aaPredicted RBP5.02□□□□□ -1.61
PROM1-220ENST00000540805 SHEQ5VZ18 495 aa5.02□□□□□ -1.61
PROM1-220ENST00000540805 GPR153Q6NV75 609 aa5.02□□□□□ -1.61
PROM1-220ENST00000540805 GTF2H2CQ6P1K8 395 aa5.02□□□□□ -1.61
PROM1-220ENST00000540805 MSANTD2Q6P1R3 559 aa5.02□□□□□ -1.61
PROM1-220ENST00000540805 TMEM65Q6PI78 240 aa5.02□□□□□ -1.61
PROM1-220ENST00000540805 CFAP77Q6ZQR2 320 aa5.02□□□□□ -1.61
PROM1-220ENST00000540805 IDO2Q6ZQW0 420 aa5.02□□□□□ -1.61
PROM1-220ENST00000540805 Q6ZVU0 165 aa5.02□□□□□ -1.61
PROM1-220ENST00000540805 TRIM69Q86WT6 500 aa5.02□□□□□ -1.61
PROM1-220ENST00000540805 LSRQ86X29 649 aaPredicted RBP5.02□□□□□ -1.61
PROM1-220ENST00000540805 TIGD4Q8IY51 512 aa5.02□□□□□ -1.61
PROM1-220ENST00000540805 ZNF683Q8IZ20 524 aa5.02□□□□□ -1.61
PROM1-220ENST00000540805 KRTCAP2Q8N6L1 136 aa5.02□□□□□ -1.61
PROM1-220ENST00000540805 GALNT11Q8NCW6 608 aa5.02□□□□□ -1.61
PROM1-220ENST00000540805 ARRDC2Q8TBH0 407 aa5.02□□□□□ -1.61
PROM1-220ENST00000540805 ZCCHC10Q8TBK6 192 aa5.02□□□□□ -1.61
PROM1-220ENST00000540805 TTC9Q92623 222 aa5.02□□□□□ -1.61
PROM1-220ENST00000540805 GGHQ92820 318 aa5.02□□□□□ -1.61
PROM1-220ENST00000540805 CDKN2AIPNLQ96HQ2 116 aa5.02□□□□□ -1.61
PROM1-220ENST00000540805 SLC38A3Q99624 504 aa5.02□□□□□ -1.61
PROM1-220ENST00000540805 GON7Q9BXV9 100 aa5.02□□□□□ -1.61
PROM1-220ENST00000540805 CLMPQ9H6B4 373 aa5.02□□□□□ -1.61
PROM1-220ENST00000540805 ERVMER34-1Q9H9K5 563 aa5.02□□□□□ -1.61
PROM1-220ENST00000540805 DIABLOQ9NR28 239 aa5.02□□□□□ -1.61
PROM1-220ENST00000540805 PLCXD1Q9NUJ7 323 aa5.02□□□□□ -1.61
PROM1-220ENST00000540805 ACOXLQ9NUZ1 547 aa5.02□□□□□ -1.61
PROM1-220ENST00000540805 THUMPD1Q9NXG2 353 aaKnown RBP5.02□□□□□ -1.61
PROM1-220ENST00000540805 RPS6KA6Q9UK32 745 aa5.02□□□□□ -1.61
PROM1-220ENST00000540805 OGDHLQ9ULD0 1010 aa5.02□□□□□ -1.61
PROM1-220ENST00000540805 RIMKLBQ9ULI2 386 aa5.02□□□□□ -1.61
PROM1-220ENST00000540805 VPS4AQ9UN37 437 aa5.02□□□□□ -1.61
PROM1-220ENST00000540805 PCDHGA6Q9Y5G7 932 aa5.02□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms