RNA–Protein interactions for RNA: ENST00000540783.5

RAPGEF4-215, Transcript of Rap guanine nucleotide exchange factor 4, human

TSL 2 BASIC

Gene RAPGEF4, Length 3,974 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RAPGEF4-215	ENST00000540783	NPRL3	Q12980	569 aa		5.43	□□□□□ -1.54
RAPGEF4-215	ENST00000540783	IL18R1	Q13478	541 aa		5.43	□□□□□ -1.54
RAPGEF4-215	ENST00000540783	PTCHD3	Q3KNS1	767 aa		5.43	□□□□□ -1.54
RAPGEF4-215	ENST00000540783	CEP78	Q5JTW2	689 aa		5.43	□□□□□ -1.54
RAPGEF4-215	ENST00000540783	CTSL3P	Q5NE16	218 aa		5.43	□□□□□ -1.54
RAPGEF4-215	ENST00000540783	AFMID	Q63HM1	303 aa		5.43	□□□□□ -1.54
RAPGEF4-215	ENST00000540783	LINC00299	Q6ZSB3	139 aa		5.43	□□□□□ -1.54
RAPGEF4-215	ENST00000540783	SNX20	Q7Z614	316 aa		5.43	□□□□□ -1.54
RAPGEF4-215	ENST00000540783	LRRTM4	Q86VH4	590 aa		5.43	□□□□□ -1.54
RAPGEF4-215	ENST00000540783	CACTIN-AS1	Q8N1I8	211 aa		5.43	□□□□□ -1.54
RAPGEF4-215	ENST00000540783	SDR16C5	Q8N3Y7	309 aa		5.43	□□□□□ -1.54
RAPGEF4-215	ENST00000540783	NKAP	Q8N5F7	415 aa	Known RBP	5.43	□□□□□ -1.54
RAPGEF4-215	ENST00000540783	TRAM1L1	Q8N609	369 aa		5.43	□□□□□ -1.54
RAPGEF4-215	ENST00000540783	MDGA1	Q8NFP4	955 aa		5.43	□□□□□ -1.54
RAPGEF4-215	ENST00000540783	OR2A12	Q8NGT7	310 aa		5.43	□□□□□ -1.54
RAPGEF4-215	ENST00000540783	CD200R1	Q8TD46	325 aa		5.43	□□□□□ -1.54
RAPGEF4-215	ENST00000540783	UTP15	Q8TED0	518 aa	Known RBP	5.43	□□□□□ -1.54
RAPGEF4-215	ENST00000540783	PDLIM5	Q96HC4	596 aa	Known RBP	5.43	□□□□□ -1.54
RAPGEF4-215	ENST00000540783	ST6GAL2	Q96JF0	529 aa		5.43	□□□□□ -1.54
RAPGEF4-215	ENST00000540783	BCL7B	Q9BQE9	202 aa		5.43	□□□□□ -1.54
RAPGEF4-215	ENST00000540783	RAB11FIP5	Q9BXF6	653 aa		5.43	□□□□□ -1.54
RAPGEF4-215	ENST00000540783	NLN	Q9BYT8	704 aa		5.43	□□□□□ -1.54
RAPGEF4-215	ENST00000540783	RANGRF	Q9HD47	186 aa	Predicted RBP	5.43	□□□□□ -1.54
RAPGEF4-215	ENST00000540783	TAS2R9	Q9NYW1	312 aa		5.43	□□□□□ -1.54
RAPGEF4-215	ENST00000540783	NUFIP1	Q9UHK0	495 aa	Known RBP	5.43	□□□□□ -1.54
RAPGEF4-215	ENST00000540783	ZNF490	Q9ULM2	529 aa	Predicted RBP	5.43	□□□□□ -1.54
RAPGEF4-215	ENST00000540783	NDRG4	Q9ULP0	352 aa	Known RBP	5.43	□□□□□ -1.54
RAPGEF4-215	ENST00000540783	DLGAP4	Q9Y2H0	992 aa		5.43	□□□□□ -1.54
RAPGEF4-215	ENST00000540783	MIA3	Q5JRA6	1907 aa		5.43	□□□□□ -1.54
RAPGEF4-215	ENST00000540783	SMIM30	A4D0T7	59 aa		5.43	□□□□□ -1.54
RAPGEF4-215	ENST00000540783	ZSCAN5B	A6NJL1	495 aa		5.43	□□□□□ -1.54
RAPGEF4-215	ENST00000540783	GPR37L1	O60883	481 aa		5.43	□□□□□ -1.54
RAPGEF4-215	ENST00000540783	SH3BGRL	O75368	114 aa		5.43	□□□□□ -1.54
RAPGEF4-215	ENST00000540783	CCNDBP1	O95273	360 aa		5.43	□□□□□ -1.54
RAPGEF4-215	ENST00000540783	CHRM5	P08912	532 aa	Predicted RBP	5.43	□□□□□ -1.54
RAPGEF4-215	ENST00000540783	IFI30	P13284	250 aa		5.43	□□□□□ -1.54
RAPGEF4-215	ENST00000540783	NDUFV2	P19404	249 aa		5.43	□□□□□ -1.54
RAPGEF4-215	ENST00000540783	OGN	P20774	298 aa	Known RBP	5.43	□□□□□ -1.54
RAPGEF4-215	ENST00000540783	NSG1	P42857	185 aa		5.43	□□□□□ -1.54
RAPGEF4-215	ENST00000540783	TPMT	P51580	245 aa		5.43	□□□□□ -1.54
RAPGEF4-215	ENST00000540783	ARF5	P84085	180 aa		5.43	□□□□□ -1.54
RAPGEF4-215	ENST00000540783	FADD	Q13158	208 aa		5.43	□□□□□ -1.54
RAPGEF4-215	ENST00000540783	MED22	Q15528	200 aa		5.43	□□□□□ -1.54
RAPGEF4-215	ENST00000540783	CYP27C1	Q4G0S4	372 aa		5.43	□□□□□ -1.54
RAPGEF4-215	ENST00000540783	TMEM52B	Q4KMG9	183 aa		5.43	□□□□□ -1.54
RAPGEF4-215	ENST00000540783	ZNF544	Q6NX49	715 aa		5.43	□□□□□ -1.54
RAPGEF4-215	ENST00000540783	GALNT7	Q86SF2	657 aa		5.43	□□□□□ -1.54
RAPGEF4-215	ENST00000540783	UBQLNL	Q8IYU4	475 aa		5.43	□□□□□ -1.54
RAPGEF4-215	ENST00000540783	ZNF675	Q8TD23	568 aa		5.43	□□□□□ -1.54
RAPGEF4-215	ENST00000540783	UBASH3B	Q8TF42	649 aa		5.43	□□□□□ -1.54
RAPGEF4-215	ENST00000540783	ASZ1	Q8WWH4	475 aa		5.43	□□□□□ -1.54
RAPGEF4-215	ENST00000540783	GGH	Q92820	318 aa		5.43	□□□□□ -1.54
RAPGEF4-215	ENST00000540783	MRGPRX1	Q96LB2	322 aa		5.43	□□□□□ -1.54
RAPGEF4-215	ENST00000540783	OR2M4	Q96R27	311 aa		5.43	□□□□□ -1.54
RAPGEF4-215	ENST00000540783	PHOX2B	Q99453	314 aa		5.43	□□□□□ -1.54
RAPGEF4-215	ENST00000540783	STRADB	Q9C0K7	418 aa		5.43	□□□□□ -1.54
RAPGEF4-215	ENST00000540783	RPRD1B	Q9NQG5	326 aa	Known RBP	5.43	□□□□□ -1.54
RAPGEF4-215	ENST00000540783	TMEM184C	Q9NVA4	438 aa		5.43	□□□□□ -1.54
RAPGEF4-215	ENST00000540783	THUMPD1	Q9NXG2	353 aa	Known RBP	5.43	□□□□□ -1.54
RAPGEF4-215	ENST00000540783	RIMKLB	Q9ULI2	386 aa		5.43	□□□□□ -1.54
RAPGEF4-215	ENST00000540783	TBC1D24	Q9ULP9	559 aa		5.43	□□□□□ -1.54
RAPGEF4-215	ENST00000540783	ERVH48-1	M5A8F1	160 aa		5.42	□□□□□ -1.54
RAPGEF4-215	ENST00000540783	KIAA0513	O60268	411 aa		5.42	□□□□□ -1.54
RAPGEF4-215	ENST00000540783	PRAMEF1	O95521	474 aa		5.42	□□□□□ -1.54
RAPGEF4-215	ENST00000540783	CPSF4	O95639	269 aa	Known RBP	5.42	□□□□□ -1.54
RAPGEF4-215	ENST00000540783	PAK4	O96013	591 aa	Predicted RBP	5.42	□□□□□ -1.54
RAPGEF4-215	ENST00000540783	RPLP0	P05388	317 aa	Known RBP	5.42	□□□□□ -1.54
RAPGEF4-215	ENST00000540783	RET	P07949	1114 aa		5.42	□□□□□ -1.54
RAPGEF4-215	ENST00000540783	BCKDHA	P12694	445 aa		5.42	□□□□□ -1.54
RAPGEF4-215	ENST00000540783	C6	P13671	934 aa		5.42	□□□□□ -1.54
RAPGEF4-215	ENST00000540783	S100A3	P33764	101 aa		5.42	□□□□□ -1.54
RAPGEF4-215	ENST00000540783	CTSO	P43234	321 aa	Predicted RBP	5.42	□□□□□ -1.54
RAPGEF4-215	ENST00000540783	PXN	P49023	591 aa	Predicted RBP	5.42	□□□□□ -1.54
RAPGEF4-215	ENST00000540783	TUBA1B	P68363	451 aa		5.42	□□□□□ -1.54
RAPGEF4-215	ENST00000540783	ZNF45	Q02386	682 aa		5.42	□□□□□ -1.54
RAPGEF4-215	ENST00000540783	CDK10	Q15131	360 aa		5.42	□□□□□ -1.54
RAPGEF4-215	ENST00000540783	TRIM61	Q5EBN2	209 aa		5.42	□□□□□ -1.54
RAPGEF4-215	ENST00000540783	ZC3H12B	Q5HYM0	836 aa	Known RBP	5.42	□□□□□ -1.54
RAPGEF4-215	ENST00000540783	ARMC4	Q5T2S8	1044 aa		5.42	□□□□□ -1.54
RAPGEF4-215	ENST00000540783	CACHD1	Q5VU97	1274 aa		5.42	□□□□□ -1.54
RAPGEF4-215	ENST00000540783	FAM151B	Q6UXP7	276 aa		5.42	□□□□□ -1.54
RAPGEF4-215	ENST00000540783	TUBA1A	Q71U36	451 aa		5.42	□□□□□ -1.54
RAPGEF4-215	ENST00000540783	ZNF438	Q7Z4V0	828 aa		5.42	□□□□□ -1.54
RAPGEF4-215	ENST00000540783	TSPYL5	Q86VY4	417 aa	Predicted RBP	5.42	□□□□□ -1.54
RAPGEF4-215	ENST00000540783	AMZ2	Q86W34	360 aa		5.42	□□□□□ -1.54
RAPGEF4-215	ENST00000540783	STX19	Q8N4C7	294 aa		5.42	□□□□□ -1.54
RAPGEF4-215	ENST00000540783	RNF175	Q8N4F7	328 aa		5.42	□□□□□ -1.54
RAPGEF4-215	ENST00000540783	SREK1IP1	Q8N9Q2	155 aa	Predicted RBP	5.42	□□□□□ -1.54
RAPGEF4-215	ENST00000540783	CHST14	Q8NCH0	376 aa		5.42	□□□□□ -1.54
RAPGEF4-215	ENST00000540783	GPR150	Q8NGU9	434 aa		5.42	□□□□□ -1.54
RAPGEF4-215	ENST00000540783	VANGL1	Q8TAA9	524 aa	Predicted RBP	5.42	□□□□□ -1.54
RAPGEF4-215	ENST00000540783	KLK6	Q92876	244 aa		5.42	□□□□□ -1.54
RAPGEF4-215	ENST00000540783	OR5M11	Q96RB7	305 aa		5.42	□□□□□ -1.54
RAPGEF4-215	ENST00000540783	CNPPD1	Q9BV87	410 aa		5.42	□□□□□ -1.54
RAPGEF4-215	ENST00000540783	DPEP2	Q9H4A9	486 aa		5.42	□□□□□ -1.54
RAPGEF4-215	ENST00000540783	LRTM1	Q9HBL6	345 aa		5.42	□□□□□ -1.54
RAPGEF4-215	ENST00000540783	CCDC177	Q9NQR7	707 aa	Predicted RBP	5.42	□□□□□ -1.54
RAPGEF4-215	ENST00000540783	ZDHHC3	Q9NYG2	299 aa		5.42	□□□□□ -1.54
RAPGEF4-215	ENST00000540783	PCDHGA6	Q9Y5G7	932 aa		5.42	□□□□□ -1.54
RAPGEF4-215	ENST00000540783	MSANTD3-TMEFF1	A0A0A6YYJ0	341 aa		5.42	□□□□□ -1.54

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