RNA–Protein interactions for RNA: ENST00000540709.1

MDM2-227, Transcript of MDM2 proto-oncogene, humanhuman

TSL 3

Gene MDM2, Length 502 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDM2-227ENST00000540709 ZNF781Q8N8C0 355 aa2.62□□□□□ -1.99
MDM2-227ENST00000540709 OR6F1Q8NGZ6 308 aa2.62□□□□□ -1.99
MDM2-227ENST00000540709 CD99L2Q8TCZ2 262 aa2.62□□□□□ -1.99
MDM2-227ENST00000540709 GPR148Q8TDV2 347 aa2.62□□□□□ -1.99
MDM2-227ENST00000540709 BSCL2Q96G97 398 aaPredicted RBP2.62□□□□□ -1.99
MDM2-227ENST00000540709 MAPKAP1Q9BPZ7 522 aa2.62□□□□□ -1.99
MDM2-227ENST00000540709 INPP5KQ9BT40 448 aa2.62□□□□□ -1.99
MDM2-227ENST00000540709 TRIM7Q9C029 511 aa2.62□□□□□ -1.99
MDM2-227ENST00000540709 UBQLN3Q9H347 655 aa2.62□□□□□ -1.99
MDM2-227ENST00000540709 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP2.62□□□□□ -1.99
MDM2-227ENST00000540709 ZNF275Q9NSD4 429 aaPredicted RBP2.62□□□□□ -1.99
MDM2-227ENST00000540709 NOCTQ9UK39 431 aaKnown RBP2.62□□□□□ -1.99
MDM2-227ENST00000540709 CLEC4EQ9ULY5 219 aa2.62□□□□□ -1.99
MDM2-227ENST00000540709 CCDC162PA2VCL2 907 aa2.61□□□□□ -1.99
MDM2-227ENST00000540709 HTR3EA5X5Y0 456 aa2.61□□□□□ -1.99
MDM2-227ENST00000540709 ZNF487B1APH4 448 aa2.61□□□□□ -1.99
MDM2-227ENST00000540709 SCO2O43819 266 aa2.61□□□□□ -1.99
MDM2-227ENST00000540709 ACSL4O60488 711 aa2.61□□□□□ -1.99
MDM2-227ENST00000540709 PPP2R1AP30153 589 aa2.61□□□□□ -1.99
MDM2-227ENST00000540709 SRD5A2P31213 254 aa2.61□□□□□ -1.99
MDM2-227ENST00000540709 PRKCIP41743 596 aa2.61□□□□□ -1.99
MDM2-227ENST00000540709 PTENP60484 403 aa2.61□□□□□ -1.99
MDM2-227ENST00000540709 CEACAM7Q14002 265 aa2.61□□□□□ -1.99
MDM2-227ENST00000540709 PSMD6Q15008 389 aa2.61□□□□□ -1.99
MDM2-227ENST00000540709 CNPY1Q3B7I2 92 aa2.61□□□□□ -1.99
MDM2-227ENST00000540709 VWA2Q5GFL6 755 aa2.61□□□□□ -1.99
MDM2-227ENST00000540709 UTF1Q5T230 341 aa2.61□□□□□ -1.99
MDM2-227ENST00000540709 LIPJQ5W064 366 aa2.61□□□□□ -1.99
MDM2-227ENST00000540709 FAM91A1Q658Y4 838 aa2.61□□□□□ -1.99
MDM2-227ENST00000540709 TMEM182Q6ZP80 229 aaPredicted RBP2.61□□□□□ -1.99
MDM2-227ENST00000540709 SAMD12Q8N8I0 201 aa2.61□□□□□ -1.99
MDM2-227ENST00000540709 RBM18Q96H35 190 aaKnown RBP2.61□□□□□ -1.99
MDM2-227ENST00000540709 RANBP9Q96S59 729 aa2.61□□□□□ -1.99
MDM2-227ENST00000540709 TERF2IPQ9NYB0 399 aa2.61□□□□□ -1.99
MDM2-227ENST00000540709 Q9UF83 564 aa2.61□□□□□ -1.99
MDM2-227ENST00000540709 FER1L5A0AVI2 2057 aa2.61□□□□□ -1.99
MDM2-227ENST00000540709 RALGAPA1Q6GYQ0 2036 aa2.6□□□□□ -1.99
MDM2-227ENST00000540709 BCLAF3A2AJT9 711 aaKnown RBP2.6□□□□□ -1.99
MDM2-227ENST00000540709 OR5H15A6NDH6 313 aa2.6□□□□□ -1.99
MDM2-227ENST00000540709 ZSCAN5CA6NGD5 496 aaPredicted RBP2.6□□□□□ -1.99
MDM2-227ENST00000540709 H7C0S8 307 aa2.6□□□□□ -1.99
MDM2-227ENST00000540709 TBCAO75347 108 aaKnown RBP2.6□□□□□ -1.99
MDM2-227ENST00000540709 GRAP2O75791 330 aa2.6□□□□□ -1.99
MDM2-227ENST00000540709 FGF19O95750 216 aa2.6□□□□□ -1.99
MDM2-227ENST00000540709 GBAP04062 536 aa2.6□□□□□ -1.99
MDM2-227ENST00000540709 KRT3P12035 628 aa2.6□□□□□ -1.99
MDM2-227ENST00000540709 EZRP15311 586 aaKnown RBP2.6□□□□□ -1.99
MDM2-227ENST00000540709 SOAT1P35610 550 aa2.6□□□□□ -1.99
MDM2-227ENST00000540709 NPY4RP50391 375 aa2.6□□□□□ -1.99
MDM2-227ENST00000540709 RPP38P78345 283 aaKnown RBP2.6□□□□□ -1.99
MDM2-227ENST00000540709 EIF4EBP2Q13542 120 aaPredicted RBP2.6□□□□□ -1.99
MDM2-227ENST00000540709 PCK2Q16822 640 aa2.6□□□□□ -1.99
MDM2-227ENST00000540709 GSG1Q2KHT4 349 aa2.6□□□□□ -1.99
MDM2-227ENST00000540709 LYPLAL1Q5VWZ2 237 aa2.6□□□□□ -1.99
MDM2-227ENST00000540709 KLHL10Q6JEL2 608 aa2.6□□□□□ -1.99
MDM2-227ENST00000540709 PET117Q6UWS5 81 aa2.6□□□□□ -1.99
MDM2-227ENST00000540709 ZNF730Q6ZMV8 503 aa2.6□□□□□ -1.99
MDM2-227ENST00000540709 METTL23Q86XA0 190 aa2.6□□□□□ -1.99
MDM2-227ENST00000540709 MEX3DQ86XN8 651 aaKnown RBP2.6□□□□□ -1.99
MDM2-227ENST00000540709 CCDC71Q8IV32 467 aaPredicted RBP2.6□□□□□ -1.99
MDM2-227ENST00000540709 TDHQ8IZJ6 230 aa2.6□□□□□ -1.99
MDM2-227ENST00000540709 ZNRF1Q8ND25 227 aa2.6□□□□□ -1.99
MDM2-227ENST00000540709 SEPT8Q92599 483 aa2.6□□□□□ -1.99
MDM2-227ENST00000540709 RIT1Q92963 219 aa2.6□□□□□ -1.99
MDM2-227ENST00000540709 ESAMQ96AP7 390 aa2.6□□□□□ -1.99
MDM2-227ENST00000540709 ERP27Q96DN0 273 aa2.6□□□□□ -1.99
MDM2-227ENST00000540709 ZBED6CLQ96FA7 236 aaPredicted RBP2.6□□□□□ -1.99
MDM2-227ENST00000540709 ERO1AQ96HE7 468 aa2.6□□□□□ -1.99
MDM2-227ENST00000540709 S100A14Q9HCY8 104 aa2.6□□□□□ -1.99
MDM2-227ENST00000540709 MED17Q9NVC6 651 aa2.6□□□□□ -1.99
MDM2-227ENST00000540709 COL16A1Q07092 1604 aaPredicted RBP2.6□□□□□ -1.99
MDM2-227ENST00000540709 KLF18A0A0U1RQI7 1052 aa2.59□□□□□ -1.99
MDM2-227ENST00000540709 SRRM4A7MD48 611 aaKnown RBP2.59□□□□□ -1.99
MDM2-227ENST00000540709 FAM220BPB1ANY3 271 aa2.59□□□□□ -1.99
MDM2-227ENST00000540709 E7ENQ6 273 aa2.59□□□□□ -1.99
MDM2-227ENST00000540709 GIG44P09565 113 aaPredicted RBP2.59□□□□□ -1.99
MDM2-227ENST00000540709 CD1EP15812 388 aa2.59□□□□□ -1.99
MDM2-227ENST00000540709 ADRA2CP18825 462 aa2.59□□□□□ -1.99
MDM2-227ENST00000540709 TFCP2Q12800 502 aa2.59□□□□□ -1.99
MDM2-227ENST00000540709 CCL14Q16627 93 aa2.59□□□□□ -1.99
MDM2-227ENST00000540709 C2orf83Q53S99 150 aa2.59□□□□□ -1.99
MDM2-227ENST00000540709 TXNRD3NBQ6F5E7 133 aa2.59□□□□□ -1.99
MDM2-227ENST00000540709 ZNF600Q6ZNG1 722 aa2.59□□□□□ -1.99
MDM2-227ENST00000540709 VASH2Q86V25 355 aa2.59□□□□□ -1.99
MDM2-227ENST00000540709 HSCBQ8IWL3 235 aa2.59□□□□□ -1.99
MDM2-227ENST00000540709 THNSL1Q8IYQ7 743 aa2.59□□□□□ -1.99
MDM2-227ENST00000540709 SLC22A18ASQ8N1D0 253 aa2.59□□□□□ -1.99
MDM2-227ENST00000540709 NUS1Q96E22 293 aa2.59□□□□□ -1.99
MDM2-227ENST00000540709 SERINC2Q96SA4 455 aa2.59□□□□□ -1.99
MDM2-227ENST00000540709 DEFB126Q9BYW3 111 aa2.59□□□□□ -1.99
MDM2-227ENST00000540709 ASB8Q9H765 288 aa2.59□□□□□ -1.99
MDM2-227ENST00000540709 RCOR3Q9P2K3 495 aaPredicted RBP2.59□□□□□ -1.99
MDM2-227ENST00000540709 UBQLN2Q9UHD9 624 aa2.59□□□□□ -1.99
MDM2-227ENST00000540709 EXOC6BQ9Y2D4 811 aa2.59□□□□□ -1.99
MDM2-227ENST00000540709 TMED7Q9Y3B3 224 aa2.59□□□□□ -1.99
MDM2-227ENST00000540709 FOXI3A8MTJ6 420 aaPredicted RBP2.58□□□□□ -2
MDM2-227ENST00000540709 TNFSF11O14788 317 aa2.58□□□□□ -2
MDM2-227ENST00000540709 HDAC3O15379 428 aa2.58□□□□□ -2
MDM2-227ENST00000540709 P2RX6O15547 441 aa2.58□□□□□ -2
MDM2-227ENST00000540709 TIMM44O43615 452 aa2.58□□□□□ -2
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms