RNA–Protein interactions for RNA: ENST00000540537.5

CHFR-217, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 3

Gene CHFR, Length 913 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-217ENST00000540537 MTFR2Q6P444 385 aa19.54■□□□□ 0.72
CHFR-217ENST00000540537 SIAH3Q8IW03 269 aa19.54■□□□□ 0.72
CHFR-217ENST00000540537 DAZLQ92904 295 aaKnown RBP19.54■□□□□ 0.72
CHFR-217ENST00000540537 GPR78Q96P69 363 aa19.54■□□□□ 0.72
CHFR-217ENST00000540537 MAPKAP1Q9BPZ7 522 aa19.54■□□□□ 0.72
CHFR-217ENST00000540537 VTI1BQ9UEU0 232 aa19.54■□□□□ 0.72
CHFR-217ENST00000540537 DMGDHQ9UI17 866 aaKnown RBP19.54■□□□□ 0.72
CHFR-217ENST00000540537 TSC22D4Q9Y3Q8 395 aa19.54■□□□□ 0.72
CHFR-217ENST00000540537 PCNX1Q96RV3 2341 aa19.54■□□□□ 0.72
CHFR-217ENST00000540537 GTF3C1Q12789 2109 aa19.54■□□□□ 0.72
CHFR-217ENST00000540537 RTCAO00442 366 aaKnown RBP19.53■□□□□ 0.72
CHFR-217ENST00000540537 SLC19A2O60779 497 aa19.53■□□□□ 0.72
CHFR-217ENST00000540537 ITGA10O75578 1167 aa19.53■□□□□ 0.72
CHFR-217ENST00000540537 ZFAND5O76080 213 aa19.53■□□□□ 0.72
CHFR-217ENST00000540537 IFNA16P05015 189 aa19.53■□□□□ 0.72
CHFR-217ENST00000540537 PIK3CBP42338 1070 aa19.53■□□□□ 0.72
CHFR-217ENST00000540537 SSR2P43308 183 aa19.53■□□□□ 0.72
CHFR-217ENST00000540537 CASP6P55212 293 aa19.53■□□□□ 0.72
CHFR-217ENST00000540537 STX4Q12846 297 aa19.53■□□□□ 0.72
CHFR-217ENST00000540537 SERTAD2Q14140 314 aa19.53■□□□□ 0.72
CHFR-217ENST00000540537 PCBP2Q15366 365 aaKnown RBP eCLIP19.53■□□□□ 0.72
CHFR-217ENST00000540537 UBAP2Q5T6F2 1119 aaKnown RBP19.53■□□□□ 0.72
CHFR-217ENST00000540537 DEPDC1Q5TB30 811 aa19.53■□□□□ 0.72
CHFR-217ENST00000540537 LIPJQ5W064 366 aa19.53■□□□□ 0.72
CHFR-217ENST00000540537 METTL2BQ6P1Q9 378 aaKnown RBP19.53■□□□□ 0.72
CHFR-217ENST00000540537 C7orf57Q8NEG2 295 aa19.53■□□□□ 0.72
CHFR-217ENST00000540537 MNS1Q8NEH6 495 aa19.53■□□□□ 0.72
CHFR-217ENST00000540537 OR14A16Q8NHC5 309 aa19.53■□□□□ 0.72
CHFR-217ENST00000540537 SLC44A1Q8WWI5 657 aa19.53■□□□□ 0.72
CHFR-217ENST00000540537 ALOXE3Q9BYJ1 711 aa19.53■□□□□ 0.72
CHFR-217ENST00000540537 CDC42EP4Q9H3Q1 356 aaKnown RBP19.53■□□□□ 0.72
CHFR-217ENST00000540537 CLCA3PQ9Y6N3 262 aa19.53■□□□□ 0.72
CHFR-217ENST00000540537 NPIPA5E9PKD4 350 aa19.52■□□□□ 0.72
CHFR-217ENST00000540537 CCL21O00585 134 aa19.52■□□□□ 0.72
CHFR-217ENST00000540537 UGDHO60701 494 aa19.52■□□□□ 0.72
CHFR-217ENST00000540537 SH3BGRLO75368 114 aa19.52■□□□□ 0.72
CHFR-217ENST00000540537 ZNF24P17028 368 aa19.52■□□□□ 0.72
CHFR-217ENST00000540537 SSR4P51571 173 aa19.52■□□□□ 0.72
CHFR-217ENST00000540537 SLC34A3Q8N130 599 aa19.52■□□□□ 0.72
CHFR-217ENST00000540537 CYP4Z2PQ8N1L4 340 aa19.52■□□□□ 0.72
CHFR-217ENST00000540537 TMEM156Q8N614 296 aa19.52■□□□□ 0.72
CHFR-217ENST00000540537 POGLUT1Q8NBL1 392 aa19.52■□□□□ 0.72
CHFR-217ENST00000540537 NOA1Q8NC60 698 aaKnown RBP19.52■□□□□ 0.72
CHFR-217ENST00000540537 MORN4Q8NDC4 146 aa19.52■□□□□ 0.72
CHFR-217ENST00000540537 HUS1BQ8NHY5 278 aa19.52■□□□□ 0.72
CHFR-217ENST00000540537 ISL2Q96A47 359 aa19.52■□□□□ 0.72
CHFR-217ENST00000540537 CCDC120Q96HB5 630 aa19.52■□□□□ 0.72
CHFR-217ENST00000540537 MAGED4Q96JG8 741 aa19.52■□□□□ 0.72
CHFR-217ENST00000540537 FMO2Q99518 471 aa19.52■□□□□ 0.72
CHFR-217ENST00000540537 CENPKQ9BS16 269 aa19.52■□□□□ 0.72
CHFR-217ENST00000540537 TSPAN10Q9H1Z9 355 aaPredicted RBP19.52■□□□□ 0.72
CHFR-217ENST00000540537 VPS11Q9H270 941 aa19.52■□□□□ 0.72
CHFR-217ENST00000540537 OR51B5Q9H339 312 aa19.52■□□□□ 0.72
CHFR-217ENST00000540537 ACTR8Q9H981 624 aa19.52■□□□□ 0.72
CHFR-217ENST00000540537 DMRT3Q9NQL9 472 aa19.52■□□□□ 0.72
CHFR-217ENST00000540537 NPIPA1Q9UND3 350 aa19.52■□□□□ 0.72
CHFR-217ENST00000540537 ZNF835Q9Y2P0 537 aa19.52■□□□□ 0.72
CHFR-217ENST00000540537 KLF13Q9Y2Y9 288 aaPredicted RBP19.52■□□□□ 0.72
CHFR-217ENST00000540537 YARS2Q9Y2Z4 477 aaKnown RBP19.52■□□□□ 0.72
CHFR-217ENST00000540537 PCDHGA11Q9Y5H2 935 aa19.52■□□□□ 0.72
CHFR-217ENST00000540537 TNPO3Q9Y5L0 923 aaKnown RBP19.52■□□□□ 0.72
CHFR-217ENST00000540537 PRKNO60260 465 aaPredicted RBP19.51■□□□□ 0.71
CHFR-217ENST00000540537 ACSL3O95573 720 aa19.51■□□□□ 0.71
CHFR-217ENST00000540537 INHBAP08476 426 aa19.51■□□□□ 0.71
CHFR-217ENST00000540537 CPN2P22792 545 aa19.51■□□□□ 0.71
CHFR-217ENST00000540537 MAGEA12P43365 314 aa19.51■□□□□ 0.71
CHFR-217ENST00000540537 PIK3CGP48736 1102 aa19.51■□□□□ 0.71
CHFR-217ENST00000540537 RAP1GDS1P52306 607 aa19.51■□□□□ 0.71
CHFR-217ENST00000540537 ARFIP1P53367 373 aa19.51■□□□□ 0.71
CHFR-217ENST00000540537 DDX39BQ13838 428 aaKnown RBP19.51■□□□□ 0.71
CHFR-217ENST00000540537 GLE1Q53GS7 698 aaKnown RBP19.51■□□□□ 0.71
CHFR-217ENST00000540537 TECRLQ5HYJ1 363 aa19.51■□□□□ 0.71
CHFR-217ENST00000540537 OR4C11Q6IEV9 310 aa19.51■□□□□ 0.71
CHFR-217ENST00000540537 Q6ZPB1 254 aaPredicted RBP19.51■□□□□ 0.71
CHFR-217ENST00000540537 GOLGA7Q7Z5G4 137 aa19.51■□□□□ 0.71
CHFR-217ENST00000540537 MYLK4Q86YV6 388 aaPredicted RBP19.51■□□□□ 0.71
CHFR-217ENST00000540537 GPALPP1Q8IXQ4 340 aa19.51■□□□□ 0.71
CHFR-217ENST00000540537 CPSF7Q8N684 471 aaKnown RBP19.51■□□□□ 0.71
CHFR-217ENST00000540537 PTPMT1Q8WUK0 201 aaPredicted RBP19.51■□□□□ 0.71
CHFR-217ENST00000540537 ZNF592Q92610 1267 aa19.51■□□□□ 0.71
CHFR-217ENST00000540537 RGMAQ96B86 450 aa19.51■□□□□ 0.71
CHFR-217ENST00000540537 REPS1Q96D71 796 aa19.51■□□□□ 0.71
CHFR-217ENST00000540537 MS4A12Q9NXJ0 267 aa19.51■□□□□ 0.71
CHFR-217ENST00000540537 CPSF2Q9P2I0 782 aaKnown RBP19.51■□□□□ 0.71
CHFR-217ENST00000540537 LRRC14BA6NHZ5 514 aa19.5■□□□□ 0.71
CHFR-217ENST00000540537 TMEM200CA6NKL6 621 aa19.5■□□□□ 0.71
CHFR-217ENST00000540537 H0YIV9 168 aa19.5■□□□□ 0.71
CHFR-217ENST00000540537 KLRC4-KLRK1H3BQV0 150 aa19.5■□□□□ 0.71
CHFR-217ENST00000540537 SAP18O00422 153 aaKnown RBP19.5■□□□□ 0.71
CHFR-217ENST00000540537 ASNA1O43681 348 aa19.5■□□□□ 0.71
CHFR-217ENST00000540537 LDB3O75112 727 aa19.5■□□□□ 0.71
CHFR-217ENST00000540537 CTAGE8P0CG41 777 aa19.5■□□□□ 0.71
CHFR-217ENST00000540537 SERPINB9P50453 376 aa19.5■□□□□ 0.71
CHFR-217ENST00000540537 PHEXP78562 749 aa19.5■□□□□ 0.71
CHFR-217ENST00000540537 GTF2H2Q13888 395 aa19.5■□□□□ 0.71
CHFR-217ENST00000540537 C3AR1Q16581 482 aa19.5■□□□□ 0.71
CHFR-217ENST00000540537 RNFT1Q5M7Z0 435 aa19.5■□□□□ 0.71
CHFR-217ENST00000540537 GTF2H2CQ6P1K8 395 aa19.5■□□□□ 0.71
CHFR-217ENST00000540537 RPTNQ6XPR3 784 aa19.5■□□□□ 0.71
CHFR-217ENST00000540537 HSDL2Q6YN16 418 aa19.5■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms