RNA–Protein interactions for RNA: ENST00000540166.5

DDB1-217, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 2

Gene DDB1, Length 3,906 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-217ENST00000540166 SERHL2Q9H4I8 314 aa8.34□□□□□ -1.08
DDB1-217ENST00000540166 MAGIXQ9H6Y5 334 aa8.34□□□□□ -1.08
DDB1-217ENST00000540166 IFT22Q9H7X7 185 aa8.34□□□□□ -1.08
DDB1-217ENST00000540166 MRM3Q9HC36 420 aaKnown RBP8.34□□□□□ -1.08
DDB1-217ENST00000540166 MCCC2Q9HCC0 563 aa8.34□□□□□ -1.08
DDB1-217ENST00000540166 BRD7Q9NPI1 651 aa8.34□□□□□ -1.08
DDB1-217ENST00000540166 IFT46Q9NQC8 304 aa8.34□□□□□ -1.08
DDB1-217ENST00000540166 SERHLQ9NQF3 203 aa8.34□□□□□ -1.08
DDB1-217ENST00000540166 SLC23A1Q9UHI7 598 aa8.34□□□□□ -1.08
DDB1-217ENST00000540166 SLC25A13Q9UJS0 675 aa8.34□□□□□ -1.08
DDB1-217ENST00000540166 A0A1W2PQL4 384 aaPredicted RBP8.33□□□□□ -1.08
DDB1-217ENST00000540166 M0R233 179 aa8.33□□□□□ -1.08
DDB1-217ENST00000540166 TNFRSF11BO00300 401 aa8.33□□□□□ -1.08
DDB1-217ENST00000540166 SLC7A4O43246 635 aa8.33□□□□□ -1.08
DDB1-217ENST00000540166 PAPSS2O95340 614 aaPredicted RBP8.33□□□□□ -1.08
DDB1-217ENST00000540166 GUCA1CO95843 209 aa8.33□□□□□ -1.08
DDB1-217ENST00000540166 ANXA3P12429 323 aa8.33□□□□□ -1.08
DDB1-217ENST00000540166 ZNF250P15622 560 aa8.33□□□□□ -1.08
DDB1-217ENST00000540166 CORO1AP31146 461 aaKnown RBP8.33□□□□□ -1.08
DDB1-217ENST00000540166 MRPL58Q14197 206 aaKnown RBP8.33□□□□□ -1.08
DDB1-217ENST00000540166 GPR68Q15743 365 aa8.33□□□□□ -1.08
DDB1-217ENST00000540166 MPPE1Q53F39 396 aa8.33□□□□□ -1.08
DDB1-217ENST00000540166 ZBTB37Q5TC79 503 aa8.33□□□□□ -1.08
DDB1-217ENST00000540166 LAIR1Q6GTX8 287 aa8.33□□□□□ -1.08
DDB1-217ENST00000540166 MZT2AQ6P582 158 aa8.33□□□□□ -1.08
DDB1-217ENST00000540166 RABEPKQ7Z6M1 372 aa8.33□□□□□ -1.08
DDB1-217ENST00000540166 CILP2Q8IUL8 1156 aa8.33□□□□□ -1.08
DDB1-217ENST00000540166 OR4L1Q8NH43 312 aa8.33□□□□□ -1.08
DDB1-217ENST00000540166 ST8SIA2Q92186 375 aa8.33□□□□□ -1.08
DDB1-217ENST00000540166 TMEM203Q969S6 136 aa8.33□□□□□ -1.08
DDB1-217ENST00000540166 CDK15Q96Q40 435 aa8.33□□□□□ -1.08
DDB1-217ENST00000540166 VAPAQ9P0L0 249 aa8.33□□□□□ -1.08
DDB1-217ENST00000540166 TECTAO75443 2155 aa8.33□□□□□ -1.08
DDB1-217ENST00000540166 TOR1AO14656 332 aa8.33□□□□□ -1.08
DDB1-217ENST00000540166 RAMP2O60895 175 aa8.33□□□□□ -1.08
DDB1-217ENST00000540166 KDM4BO94953 1096 aa8.33□□□□□ -1.08
DDB1-217ENST00000540166 CDK1P06493 297 aa8.33□□□□□ -1.08
DDB1-217ENST00000540166 HLA-DMAP28067 261 aa8.33□□□□□ -1.08
DDB1-217ENST00000540166 CBX5P45973 191 aa8.33□□□□□ -1.08
DDB1-217ENST00000540166 CDKN2DP55273 166 aa8.33□□□□□ -1.08
DDB1-217ENST00000540166 RRAS2P62070 204 aaPredicted RBP8.33□□□□□ -1.08
DDB1-217ENST00000540166 SLC10A7Q0GE19 358 aa8.33□□□□□ -1.08
DDB1-217ENST00000540166 GRK1Q15835 563 aa8.33□□□□□ -1.08
DDB1-217ENST00000540166 BAK1Q16611 211 aa8.33□□□□□ -1.08
DDB1-217ENST00000540166 IGSF11Q5DX21 431 aa8.33□□□□□ -1.08
DDB1-217ENST00000540166 TIGD3Q6B0B8 471 aa8.33□□□□□ -1.08
DDB1-217ENST00000540166 CASP12Q6UXS9 341 aa8.33□□□□□ -1.08
DDB1-217ENST00000540166 PRSS42Q7Z5A4 293 aa8.33□□□□□ -1.08
DDB1-217ENST00000540166 CCDC190Q86UF4 302 aa8.33□□□□□ -1.08
DDB1-217ENST00000540166 ZNF680Q8NEM1 530 aa8.33□□□□□ -1.08
DDB1-217ENST00000540166 ST8SIA4Q92187 359 aa8.33□□□□□ -1.08
DDB1-217ENST00000540166 MRGPRX2Q96LB1 330 aa8.33□□□□□ -1.08
DDB1-217ENST00000540166 ZNF583Q96ND8 569 aa8.33□□□□□ -1.08
DDB1-217ENST00000540166 QRFPRQ96P65 431 aa8.33□□□□□ -1.08
DDB1-217ENST00000540166 PLA2G2FQ9BZM2 168 aa8.33□□□□□ -1.08
DDB1-217ENST00000540166 B3GNT4Q9C0J1 378 aa8.33□□□□□ -1.08
DDB1-217ENST00000540166 CHRDQ9H2X0 955 aa8.33□□□□□ -1.08
DDB1-217ENST00000540166 FOLH1BQ9HBA9 442 aa8.33□□□□□ -1.08
DDB1-217ENST00000540166 MS4A12Q9NXJ0 267 aa8.33□□□□□ -1.08
DDB1-217ENST00000540166 SEC14L4Q9UDX3 406 aa8.33□□□□□ -1.08
DDB1-217ENST00000540166 EIF2B4Q9UI10 523 aaKnown RBP8.33□□□□□ -1.08
DDB1-217ENST00000540166 TMCC3Q9ULS5 477 aa8.33□□□□□ -1.08
DDB1-217ENST00000540166 PLCL2Q9UPR0 1127 aa8.33□□□□□ -1.08
DDB1-217ENST00000540166 A0A0X1KG70 313 aa8.33□□□□□ -1.08
DDB1-217ENST00000540166 ZNF840PA6NDX5 716 aa8.33□□□□□ -1.08
DDB1-217ENST00000540166 H3BM21 787 aa8.33□□□□□ -1.08
DDB1-217ENST00000540166 H3BN98 237 aa8.33□□□□□ -1.08
DDB1-217ENST00000540166 WWP2O00308 870 aa8.33□□□□□ -1.08
DDB1-217ENST00000540166 UPK1AO00322 258 aa8.33□□□□□ -1.08
DDB1-217ENST00000540166 CCNDBP1O95273 360 aa8.33□□□□□ -1.08
DDB1-217ENST00000540166 IGFBP6P24592 240 aaPredicted RBP8.33□□□□□ -1.08
DDB1-217ENST00000540166 AQP1P29972 269 aa8.33□□□□□ -1.08
DDB1-217ENST00000540166 OR1E1P30953 314 aa8.33□□□□□ -1.08
DDB1-217ENST00000540166 ATP6V1E1P36543 226 aa8.33□□□□□ -1.08
DDB1-217ENST00000540166 CCR2P41597 374 aa8.33□□□□□ -1.08
DDB1-217ENST00000540166 STARD6P59095 220 aa8.33□□□□□ -1.08
DDB1-217ENST00000540166 DEFA5Q01523 94 aa8.33□□□□□ -1.08
DDB1-217ENST00000540166 SPIBQ01892 262 aa8.33□□□□□ -1.08
DDB1-217ENST00000540166 CPZQ66K79 652 aa8.33□□□□□ -1.08
DDB1-217ENST00000540166 PAQR3Q6TCH7 311 aa8.33□□□□□ -1.08
DDB1-217ENST00000540166 SLC36A4Q6YBV0 504 aa8.33□□□□□ -1.08
DDB1-217ENST00000540166 GLRX5Q86SX6 157 aa8.33□□□□□ -1.08
DDB1-217ENST00000540166 OR13C4Q8NGS5 318 aa8.33□□□□□ -1.08
DDB1-217ENST00000540166 KLHL6Q8WZ60 621 aa8.33□□□□□ -1.08
DDB1-217ENST00000540166 RNFT2Q96EX2 444 aa8.33□□□□□ -1.08
DDB1-217ENST00000540166 TMEM80Q96HE8 168 aa8.33□□□□□ -1.08
DDB1-217ENST00000540166 SERPINB11Q96P15 392 aa8.33□□□□□ -1.08
DDB1-217ENST00000540166 ZNF416Q9BWM5 594 aa8.33□□□□□ -1.08
DDB1-217ENST00000540166 TFB2MQ9H5Q4 396 aaKnown RBP8.33□□□□□ -1.08
DDB1-217ENST00000540166 WASH6PQ9NQA3 447 aa8.33□□□□□ -1.08
DDB1-217ENST00000540166 DCAF13Q9NV06 445 aaKnown RBP8.33□□□□□ -1.08
DDB1-217ENST00000540166 HCN3Q9P1Z3 774 aa8.33□□□□□ -1.08
DDB1-217ENST00000540166 MARCH4Q9P2E8 410 aaPredicted RBP8.33□□□□□ -1.08
DDB1-217ENST00000540166 FAM8A1Q9UBU6 413 aa8.33□□□□□ -1.08
DDB1-217ENST00000540166 TBC1D24Q9ULP9 559 aa8.33□□□□□ -1.08
DDB1-217ENST00000540166 NAALAD2Q9Y3Q0 740 aa8.33□□□□□ -1.08
DDB1-217ENST00000540166 KLK4Q9Y5K2 254 aa8.33□□□□□ -1.08
DDB1-217ENST00000540166 GOLGA4Q13439 2230 aaKnown RBP8.32□□□□□ -1.08
DDB1-217ENST00000540166 A0A075B6Q4 140 aa8.32□□□□□ -1.08
DDB1-217ENST00000540166 A0A0G2JPF8 293 aa8.32□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms