RNA–Protein interactions for RNA: ENST00000539712.5

DDB1-215, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 2

Gene DDB1, Length 1,020 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-215ENST00000539712 DCTP40126 519 aa15.62■□□□□ 0.09
DDB1-215ENST00000539712 PIK3CBP42338 1070 aa15.62■□□□□ 0.09
DDB1-215ENST00000539712 CYB561P49447 251 aa15.62■□□□□ 0.09
DDB1-215ENST00000539712 CLCN2P51788 898 aa15.62■□□□□ 0.09
DDB1-215ENST00000539712 ELAVL1Q15717 326 aaKnown RBP15.62■□□□□ 0.09
DDB1-215ENST00000539712 ZNF787Q6DD87 383 aa15.62■□□□□ 0.09
DDB1-215ENST00000539712 CHSY3Q70JA7 882 aa15.62■□□□□ 0.09
DDB1-215ENST00000539712 CHERPQ8IWX8 916 aaKnown RBP15.62■□□□□ 0.09
DDB1-215ENST00000539712 HORMAD2Q8N7B1 307 aa15.62■□□□□ 0.09
DDB1-215ENST00000539712 ZNF321PQ8N8H1 164 aa15.62■□□□□ 0.09
DDB1-215ENST00000539712 TMEM178AQ8NBL3 297 aa15.62■□□□□ 0.09
DDB1-215ENST00000539712 SRFBP1Q8NEF9 429 aaKnown RBP15.62■□□□□ 0.09
DDB1-215ENST00000539712 DCAKDQ8WVC6 231 aa15.62■□□□□ 0.09
DDB1-215ENST00000539712 CMTM7Q96FZ5 175 aa15.62■□□□□ 0.09
DDB1-215ENST00000539712 VMP1Q96GC9 406 aa15.62■□□□□ 0.09
DDB1-215ENST00000539712 FMO2Q99518 471 aa15.62■□□□□ 0.09
DDB1-215ENST00000539712 ALOXE3Q9BYJ1 711 aa15.62■□□□□ 0.09
DDB1-215ENST00000539712 ROGDIQ9GZN7 287 aa15.62■□□□□ 0.09
DDB1-215ENST00000539712 TSPAN10Q9H1Z9 355 aaPredicted RBP15.62■□□□□ 0.09
DDB1-215ENST00000539712 COPS7BQ9H9Q2 264 aaPredicted RBP15.62■□□□□ 0.09
DDB1-215ENST00000539712 DMRT3Q9NQL9 472 aa15.62■□□□□ 0.09
DDB1-215ENST00000539712 MRPS33Q9Y291 106 aaKnown RBP15.62■□□□□ 0.09
DDB1-215ENST00000539712 CACNA1DQ01668 2161 aa15.62■□□□□ 0.09
DDB1-215ENST00000539712 APCP25054 2843 aa15.62■□□□□ 0.09
DDB1-215ENST00000539712 H0YIV9 168 aa15.61■□□□□ 0.09
DDB1-215ENST00000539712 LDB3O75112 727 aa15.61■□□□□ 0.09
DDB1-215ENST00000539712 GFAPP14136 432 aa15.61■□□□□ 0.09
DDB1-215ENST00000539712 SERPINB1P30740 379 aa15.61■□□□□ 0.09
DDB1-215ENST00000539712 MAPKAPK3Q16644 382 aa15.61■□□□□ 0.09
DDB1-215ENST00000539712 GLE1Q53GS7 698 aaKnown RBP15.61■□□□□ 0.09
DDB1-215ENST00000539712 LIPJQ5W064 366 aa15.61■□□□□ 0.09
DDB1-215ENST00000539712 OR4C11Q6IEV9 310 aa15.61■□□□□ 0.09
DDB1-215ENST00000539712 GOLGA7Q7Z5G4 137 aa15.61■□□□□ 0.09
DDB1-215ENST00000539712 TMEM151AQ8N4L1 468 aa15.61■□□□□ 0.09
DDB1-215ENST00000539712 L3MBTL4Q8NA19 623 aa15.61■□□□□ 0.09
DDB1-215ENST00000539712 MNS1Q8NEH6 495 aa15.61■□□□□ 0.09
DDB1-215ENST00000539712 GPR137Q96N19 417 aa15.61■□□□□ 0.09
DDB1-215ENST00000539712 PAFAH2Q99487 392 aa15.61■□□□□ 0.09
DDB1-215ENST00000539712 MTERF1Q99551 399 aaKnown RBP15.61■□□□□ 0.09
DDB1-215ENST00000539712 TSPYL1Q9H0U9 437 aa15.61■□□□□ 0.09
DDB1-215ENST00000539712 VPS11Q9H270 941 aa15.61■□□□□ 0.09
DDB1-215ENST00000539712 LIN28AQ9H9Z2 209 aaKnown RBP15.61■□□□□ 0.09
DDB1-215ENST00000539712 ADGRE2Q9UHX3 823 aa15.61■□□□□ 0.09
DDB1-215ENST00000539712 ZNF835Q9Y2P0 537 aa15.61■□□□□ 0.09
DDB1-215ENST00000539712 RNF11Q9Y3C5 154 aa15.61■□□□□ 0.09
DDB1-215ENST00000539712 FBN2P35556 2912 aa15.61■□□□□ 0.09
DDB1-215ENST00000539712 TACC2O95359 2948 aa15.6■□□□□ 0.09
DDB1-215ENST00000539712 NPIPA5E9PKD4 350 aa15.6■□□□□ 0.09
DDB1-215ENST00000539712 PLPP1O14494 284 aa15.6■□□□□ 0.09
DDB1-215ENST00000539712 OR7A17O14581 309 aa15.6■□□□□ 0.09
DDB1-215ENST00000539712 UGDHO60701 494 aa15.6■□□□□ 0.09
DDB1-215ENST00000539712 ITGA10O75578 1167 aa15.6■□□□□ 0.09
DDB1-215ENST00000539712 ETHE1O95571 254 aa15.6■□□□□ 0.09
DDB1-215ENST00000539712 SBK3P0C264 359 aa15.6■□□□□ 0.09
DDB1-215ENST00000539712 CTAGE8P0CG41 777 aa15.6■□□□□ 0.09
DDB1-215ENST00000539712 CA7P43166 264 aa15.6■□□□□ 0.09
DDB1-215ENST00000539712 PER3P56645 1201 aa15.6■□□□□ 0.09
DDB1-215ENST00000539712 RPS13P62277 151 aaKnown RBP15.6■□□□□ 0.09
DDB1-215ENST00000539712 IGLV3-21P80748 117 aaPredicted RBP15.6■□□□□ 0.09
DDB1-215ENST00000539712 ID2Q02363 134 aa15.6■□□□□ 0.09
DDB1-215ENST00000539712 SLAMF1Q13291 335 aa15.6■□□□□ 0.09
DDB1-215ENST00000539712 DDX39BQ13838 428 aaKnown RBP15.6■□□□□ 0.09
DDB1-215ENST00000539712 GTF2H2Q13888 395 aa15.6■□□□□ 0.09
DDB1-215ENST00000539712 RCN2Q14257 317 aa15.6■□□□□ 0.09
DDB1-215ENST00000539712 AP5B1Q2VPB7 878 aa15.6■□□□□ 0.09
DDB1-215ENST00000539712 KRTCAP3Q53RY4 240 aa15.6■□□□□ 0.09
DDB1-215ENST00000539712 GTF2H2CQ6P1K8 395 aa15.6■□□□□ 0.09
DDB1-215ENST00000539712 METTL2BQ6P1Q9 378 aaKnown RBP15.6■□□□□ 0.09
DDB1-215ENST00000539712 CEP128Q6ZU80 1094 aa15.6■□□□□ 0.09
DDB1-215ENST00000539712 MDGA2Q7Z553 956 aa15.6■□□□□ 0.09
DDB1-215ENST00000539712 CTAGE4Q8IX94 777 aa15.6■□□□□ 0.09
DDB1-215ENST00000539712 TMEM132CQ8N3T6 1108 aa15.6■□□□□ 0.09
DDB1-215ENST00000539712 CPSF7Q8N684 471 aaKnown RBP15.6■□□□□ 0.09
DDB1-215ENST00000539712 WDR20Q8TBZ3 569 aa15.6■□□□□ 0.09
DDB1-215ENST00000539712 IPPKQ9H8X2 491 aa15.6■□□□□ 0.09
DDB1-215ENST00000539712 ACTR8Q9H981 624 aa15.6■□□□□ 0.09
DDB1-215ENST00000539712 CPSF2Q9P2I0 782 aaKnown RBP15.6■□□□□ 0.09
DDB1-215ENST00000539712 FBXW2Q9UKT8 454 aa15.6■□□□□ 0.09
DDB1-215ENST00000539712 NPIPA1Q9UND3 350 aa15.6■□□□□ 0.09
DDB1-215ENST00000539712 ATG4BQ9Y4P1 393 aa15.6■□□□□ 0.09
DDB1-215ENST00000539712 TRGV8A0A0C4DH27 118 aa15.59■□□□□ 0.09
DDB1-215ENST00000539712 WASHC1A8K0Z3 465 aa15.59■□□□□ 0.09
DDB1-215ENST00000539712 FCHO1O14526 889 aa15.59■□□□□ 0.09
DDB1-215ENST00000539712 ZNHIT1O43257 154 aa15.59■□□□□ 0.09
DDB1-215ENST00000539712 FGF17O60258 216 aa15.59■□□□□ 0.09
DDB1-215ENST00000539712 ZNF354AO60765 605 aaPredicted RBP15.59■□□□□ 0.09
DDB1-215ENST00000539712 SLC19A2O60779 497 aa15.59■□□□□ 0.09
DDB1-215ENST00000539712 EEDO75530 441 aaKnown RBP15.59■□□□□ 0.09
DDB1-215ENST00000539712 ZFAND5O76080 213 aa15.59■□□□□ 0.09
DDB1-215ENST00000539712 INHBAP08476 426 aa15.59■□□□□ 0.09
DDB1-215ENST00000539712 GCAP28676 217 aa15.59■□□□□ 0.09
DDB1-215ENST00000539712 BSGP35613 385 aa15.59■□□□□ 0.09
DDB1-215ENST00000539712 SSR2P43308 183 aa15.59■□□□□ 0.09
DDB1-215ENST00000539712 NEK2P51955 445 aa15.59■□□□□ 0.09
DDB1-215ENST00000539712 ALDH6A1Q02252 535 aaKnown RBP15.59■□□□□ 0.09
DDB1-215ENST00000539712 CPSF6Q16630 551 aaKnown RBP eCLIP15.59■□□□□ 0.09
DDB1-215ENST00000539712 ZNF800Q2TB10 664 aaPredicted RBP eCLIP15.59■□□□□ 0.091e-6■■■□□ 16.3
DDB1-215ENST00000539712 MRM1Q6IN84 353 aaKnown RBP15.59■□□□□ 0.09
DDB1-215ENST00000539712 KLC3Q6P597 504 aa15.59■□□□□ 0.09
DDB1-215ENST00000539712 Q6ZPB1 254 aaPredicted RBP15.59■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms