RNA–Protein interactions for RNA: ENST00000539413.1

CIT-210, Transcript of citron rho-interacting serine/threonine kinase, humanhuman

TSL 4

Gene CIT, Length 554 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIT-210ENST00000539413 ABI3Q9P2A4 366 aa14.64□□□□□ -0.07
CIT-210ENST00000539413 SPACA6W5XKT8 324 aa14.64□□□□□ -0.07
CIT-210ENST00000539413 SCN2AQ99250 2005 aa14.63□□□□□ -0.07
CIT-210ENST00000539413 SHANK1Q9Y566 2161 aa14.63□□□□□ -0.07
CIT-210ENST00000539413 A0A1W2PPM1 405 aa14.63□□□□□ -0.07
CIT-210ENST00000539413 GABRR3A8MPY1 467 aa14.63□□□□□ -0.07
CIT-210ENST00000539413 FOXE1O00358 373 aaPredicted RBP14.63□□□□□ -0.07
CIT-210ENST00000539413 PRAMEF2O60811 474 aa14.63□□□□□ -0.07
CIT-210ENST00000539413 LDB3O75112 727 aa14.63□□□□□ -0.07
CIT-210ENST00000539413 EEDO75530 441 aaKnown RBP14.63□□□□□ -0.07
CIT-210ENST00000539413 CD96P40200 585 aa14.63□□□□□ -0.07
CIT-210ENST00000539413 SLCO1A2P46721 670 aa14.63□□□□□ -0.07
CIT-210ENST00000539413 ID2Q02363 134 aa14.63□□□□□ -0.07
CIT-210ENST00000539413 CUL3Q13618 768 aa14.63□□□□□ -0.07
CIT-210ENST00000539413 TERF2Q15554 542 aa14.63□□□□□ -0.07
CIT-210ENST00000539413 FAM219BQ5XKK7 198 aa14.63□□□□□ -0.07
CIT-210ENST00000539413 MILR1Q7Z6M3 343 aa14.63□□□□□ -0.07
CIT-210ENST00000539413 LCA5Q86VQ0 697 aa14.63□□□□□ -0.07
CIT-210ENST00000539413 LGI4Q8N135 537 aa14.63□□□□□ -0.07
CIT-210ENST00000539413 ZCCHC7Q8N3Z6 543 aaKnown RBP14.63□□□□□ -0.07
CIT-210ENST00000539413 SUN3Q8TAQ9 357 aa14.63□□□□□ -0.07
CIT-210ENST00000539413 PRR7Q8TB68 274 aa14.63□□□□□ -0.07
CIT-210ENST00000539413 ACMSDQ8TDX5 336 aa14.63□□□□□ -0.07
CIT-210ENST00000539413 FAR1Q8WVX9 515 aa14.63□□□□□ -0.07
CIT-210ENST00000539413 CENPKQ9BS16 269 aa14.63□□□□□ -0.07
CIT-210ENST00000539413 ALOXE3Q9BYJ1 711 aa14.63□□□□□ -0.07
CIT-210ENST00000539413 ADAP2Q9NPF8 381 aa14.63□□□□□ -0.07
CIT-210ENST00000539413 PSD3Q9NYI0 1048 aa14.63□□□□□ -0.07
CIT-210ENST00000539413 ZNF223Q9UK11 482 aaPredicted RBP14.63□□□□□ -0.07
CIT-210ENST00000539413 TRBV11-1A0A0K0K1C0 115 aa14.62□□□□□ -0.07
CIT-210ENST00000539413 ANKUB1A6NFN9 424 aa14.62□□□□□ -0.07
CIT-210ENST00000539413 DLX3O60479 287 aa14.62□□□□□ -0.07
CIT-210ENST00000539413 PRKRAO75569 313 aaKnown RBP14.62□□□□□ -0.07
CIT-210ENST00000539413 IFNA16P05015 189 aa14.62□□□□□ -0.07
CIT-210ENST00000539413 TAC1P20366 129 aa14.62□□□□□ -0.07
CIT-210ENST00000539413 TPP2P29144 1249 aaPredicted RBP14.62□□□□□ -0.07
CIT-210ENST00000539413 BSGP35613 385 aa14.62□□□□□ -0.07
CIT-210ENST00000539413 GPR143P51810 404 aa14.62□□□□□ -0.07
CIT-210ENST00000539413 ARFIP1P53367 373 aa14.62□□□□□ -0.07
CIT-210ENST00000539413 HNRNPH2P55795 449 aaKnown RBP14.62□□□□□ -0.07
CIT-210ENST00000539413 HERVK_113P63132 956 aa14.62□□□□□ -0.07
CIT-210ENST00000539413 SRSF11Q05519 484 aaKnown RBP14.62□□□□□ -0.07
CIT-210ENST00000539413 STX4Q12846 297 aa14.62□□□□□ -0.07
CIT-210ENST00000539413 ELAVL1Q15717 326 aaKnown RBP14.62□□□□□ -0.07
CIT-210ENST00000539413 GGTA1PQ4G0N0 100 aa14.62□□□□□ -0.07
CIT-210ENST00000539413 FHL5Q5TD97 284 aa14.62□□□□□ -0.07
CIT-210ENST00000539413 ZNF468Q5VIY5 522 aaPredicted RBP14.62□□□□□ -0.07
CIT-210ENST00000539413 FRG2Q64ET8 278 aa14.62□□□□□ -0.07
CIT-210ENST00000539413 C18orf63Q68DL7 685 aa14.62□□□□□ -0.07
CIT-210ENST00000539413 TTC19Q6DKK2 380 aaPredicted RBP14.62□□□□□ -0.07
CIT-210ENST00000539413 LETMD1Q6P1Q0 360 aa14.62□□□□□ -0.07
CIT-210ENST00000539413 GPR180Q86V85 440 aa14.62□□□□□ -0.07
CIT-210ENST00000539413 MDS2Q8NDY4 140 aa14.62□□□□□ -0.07
CIT-210ENST00000539413 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP14.62□□□□□ -0.07
CIT-210ENST00000539413 NCLNQ969V3 563 aa14.62□□□□□ -0.07
CIT-210ENST00000539413 ANKRD9Q96BM1 317 aaPredicted RBP14.62□□□□□ -0.07
CIT-210ENST00000539413 VMP1Q96GC9 406 aa14.62□□□□□ -0.07
CIT-210ENST00000539413 FRG2BQ96QU4 278 aa14.62□□□□□ -0.07
CIT-210ENST00000539413 UTP23Q9BRU9 249 aaKnown RBP14.62□□□□□ -0.07
CIT-210ENST00000539413 ERVK-6Q9BXR3 956 aa14.62□□□□□ -0.07
CIT-210ENST00000539413 DEFB126Q9BYW3 111 aa14.62□□□□□ -0.07
CIT-210ENST00000539413 PPIEQ9UNP9 301 aaKnown RBP14.62□□□□□ -0.07
CIT-210ENST00000539413 ATG4BQ9Y4P1 393 aa14.62□□□□□ -0.07
CIT-210ENST00000539413 A0A0A6YYD5 115 aa14.61□□□□□ -0.07
CIT-210ENST00000539413 BLACEA4D250 179 aa14.61□□□□□ -0.07
CIT-210ENST00000539413 SMIM23A6NLE4 172 aa14.61□□□□□ -0.07
CIT-210ENST00000539413 TMPRSS11DO60235 418 aa14.61□□□□□ -0.07
CIT-210ENST00000539413 FGF17O60258 216 aa14.61□□□□□ -0.07
CIT-210ENST00000539413 SEMA7AO75326 666 aa14.61□□□□□ -0.07
CIT-210ENST00000539413 SUPT7LO94864 414 aa14.61□□□□□ -0.07
CIT-210ENST00000539413 OTCP00480 354 aa14.61□□□□□ -0.07
CIT-210ENST00000539413 GSTA1P08263 222 aa14.61□□□□□ -0.07
CIT-210ENST00000539413 HSD17B3P37058 310 aa14.61□□□□□ -0.07
CIT-210ENST00000539413 CLCN2P51788 898 aa14.61□□□□□ -0.07
CIT-210ENST00000539413 MLF1P58340 268 aa14.61□□□□□ -0.07
CIT-210ENST00000539413 VSNL1P62760 191 aa14.61□□□□□ -0.07
CIT-210ENST00000539413 TNFRSF17Q02223 184 aa14.61□□□□□ -0.07
CIT-210ENST00000539413 OC90Q02509 493 aaPredicted RBP14.61□□□□□ -0.07
CIT-210ENST00000539413 CLCQ05315 142 aa14.61□□□□□ -0.07
CIT-210ENST00000539413 OR1C1Q15619 314 aa14.61□□□□□ -0.07
CIT-210ENST00000539413 INAQ16352 499 aa14.61□□□□□ -0.07
CIT-210ENST00000539413 UNC50Q53HI1 259 aa14.61□□□□□ -0.07
CIT-210ENST00000539413 SGO1Q5FBB7 561 aa14.61□□□□□ -0.07
CIT-210ENST00000539413 ZNF766Q5HY98 468 aa14.61□□□□□ -0.07
CIT-210ENST00000539413 ZNF678Q5SXM1 525 aa14.61□□□□□ -0.07
CIT-210ENST00000539413 SPINK14Q6IE38 97 aa14.61□□□□□ -0.07
CIT-210ENST00000539413 MRM1Q6IN84 353 aaKnown RBP14.61□□□□□ -0.07
CIT-210ENST00000539413 OR4N5Q8IXE1 308 aa14.61□□□□□ -0.07
CIT-210ENST00000539413 TMEM132CQ8N3T6 1108 aa14.61□□□□□ -0.07
CIT-210ENST00000539413 BCORP1Q8N888 145 aa14.61□□□□□ -0.07
CIT-210ENST00000539413 ST6GALNAC3Q8NDV1 305 aa14.61□□□□□ -0.07
CIT-210ENST00000539413 EPS8L3Q8TE67 593 aaKnown RBP14.61□□□□□ -0.07
CIT-210ENST00000539413 TRPC4APQ8TEL6 797 aa14.61□□□□□ -0.07
CIT-210ENST00000539413 THAP3Q8WTV1 239 aaPredicted RBP14.61□□□□□ -0.07
CIT-210ENST00000539413 PTPMT1Q8WUK0 201 aaPredicted RBP14.61□□□□□ -0.07
CIT-210ENST00000539413 TMEM237Q96Q45 408 aa14.61□□□□□ -0.07
CIT-210ENST00000539413 SERPINI1Q99574 410 aa14.61□□□□□ -0.07
CIT-210ENST00000539413 HES7Q9BYE0 225 aa14.61□□□□□ -0.07
CIT-210ENST00000539413 DDX31Q9H8H2 851 aaKnown RBP14.61□□□□□ -0.07
CIT-210ENST00000539413 KLHL1Q9NR64 748 aa14.61□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms