RNA–Protein interactions for RNA: ENST00000539208.5

GNE-204, Transcript of glucosamine (UDP-N-acetyl)-2-epimerase/N-acetylmannosamine kinase, humanhuman

TSL 2 BASIC

Gene GNE, Length 2,190 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GNE-204ENST00000539208 YIPF6Q96EC8 236 aa17.05■□□□□ 0.32
GNE-204ENST00000539208 C12orf66Q96MD2 445 aa17.05■□□□□ 0.32
GNE-204ENST00000539208 KCNC2Q96PR1 638 aa17.05■□□□□ 0.32
GNE-204ENST00000539208 ACSS1Q9NUB1 689 aaPredicted RBP17.05■□□□□ 0.32
GNE-204ENST00000539208 ACER3Q9NUN7 267 aa17.05■□□□□ 0.32
GNE-204ENST00000539208 RAB23Q9ULC3 237 aa17.05■□□□□ 0.32
GNE-204ENST00000539208 RNF6Q9Y252 685 aa17.05■□□□□ 0.32
GNE-204ENST00000539208 A0A0J9YVX5 310 aa17.05■□□□□ 0.32
GNE-204ENST00000539208 TRBC2A0A5B9 178 aa17.05■□□□□ 0.32
GNE-204ENST00000539208 ARRDC5A6NEK1 342 aa17.05■□□□□ 0.32
GNE-204ENST00000539208 CLPXO76031 633 aa17.05■□□□□ 0.32
GNE-204ENST00000539208 ACP5P13686 325 aa17.05■□□□□ 0.32
GNE-204ENST00000539208 TNFRSF4P43489 277 aa17.05■□□□□ 0.32
GNE-204ENST00000539208 KCNC4Q03721 635 aa17.05■□□□□ 0.32
GNE-204ENST00000539208 AQP6Q13520 282 aa17.05■□□□□ 0.32
GNE-204ENST00000539208 C9orf50Q5SZB4 431 aa17.05■□□□□ 0.32
GNE-204ENST00000539208 GPR153Q6NV75 609 aa17.05■□□□□ 0.32
GNE-204ENST00000539208 KLHL35Q6PF15 583 aa17.05■□□□□ 0.32
GNE-204ENST00000539208 LGI4Q8N135 537 aa17.05■□□□□ 0.32
GNE-204ENST00000539208 OR2L8Q8NGY9 312 aa17.05■□□□□ 0.32
GNE-204ENST00000539208 CREB3L4Q8TEY5 395 aa17.05■□□□□ 0.32
GNE-204ENST00000539208 UBE2FQ969M7 185 aa17.05■□□□□ 0.32
GNE-204ENST00000539208 FAM131CQ96AQ9 280 aa17.05■□□□□ 0.32
GNE-204ENST00000539208 BTBD1Q9H0C5 482 aa17.05■□□□□ 0.32
GNE-204ENST00000539208 ACOT13Q9NPJ3 140 aa17.05■□□□□ 0.32
GNE-204ENST00000539208 RASSF1Q9NS23 344 aa17.05■□□□□ 0.32
GNE-204ENST00000539208 SLC17A4Q9Y2C5 497 aa17.05■□□□□ 0.32
GNE-204ENST00000539208 FAM32AQ9Y421 112 aaKnown RBP17.05■□□□□ 0.32
GNE-204ENST00000539208 PCDHGA2Q9Y5H1 932 aa17.05■□□□□ 0.32
GNE-204ENST00000539208 TMPRSS11DO60235 418 aa17.04■□□□□ 0.32
GNE-204ENST00000539208 LCMT2O60294 686 aaKnown RBP17.04■□□□□ 0.32
GNE-204ENST00000539208 FOXD2O60548 495 aaPredicted RBP17.04■□□□□ 0.32
GNE-204ENST00000539208 MAP2K4P45985 399 aa17.04■□□□□ 0.32
GNE-204ENST00000539208 MASP1P48740 699 aa17.04■□□□□ 0.32
GNE-204ENST00000539208 ALDH9A1P49189 494 aa17.04■□□□□ 0.32
GNE-204ENST00000539208 GALK1P51570 392 aa17.04■□□□□ 0.32
GNE-204ENST00000539208 SGCGQ13326 291 aa17.04■□□□□ 0.32
GNE-204ENST00000539208 SPCS2Q15005 226 aa17.04■□□□□ 0.32
GNE-204ENST00000539208 OR4C11Q6IEV9 310 aa17.04■□□□□ 0.32
GNE-204ENST00000539208 TMEM184AQ6ZMB5 413 aa17.04■□□□□ 0.32
GNE-204ENST00000539208 HORMAD2Q8N7B1 307 aa17.04■□□□□ 0.32
GNE-204ENST00000539208 OR2A1Q8NGT9 310 aa17.04■□□□□ 0.32
GNE-204ENST00000539208 RHOXF1Q8NHV9 184 aa17.04■□□□□ 0.32
GNE-204ENST00000539208 ZBED6CLQ96FA7 236 aaPredicted RBP17.04■□□□□ 0.32
GNE-204ENST00000539208 ABCG4Q9H172 646 aa17.04■□□□□ 0.32
GNE-204ENST00000539208 SIRT3Q9NTG7 399 aaPredicted RBP17.04■□□□□ 0.32
GNE-204ENST00000539208 IGKV1-8A0A0C4DH67 115 aa17.04■□□□□ 0.32
GNE-204ENST00000539208 RECKO95980 971 aa17.04■□□□□ 0.32
GNE-204ENST00000539208 CEACAM5P06731 702 aa17.04■□□□□ 0.32
GNE-204ENST00000539208 TFPTP0C1Z6 253 aa17.04■□□□□ 0.32
GNE-204ENST00000539208 DRD2P14416 443 aa17.04■□□□□ 0.32
GNE-204ENST00000539208 PKLRP30613 574 aa17.04■□□□□ 0.32
GNE-204ENST00000539208 GDI1P31150 447 aa17.04■□□□□ 0.32
GNE-204ENST00000539208 CLCA4Q14CN2 919 aa17.04■□□□□ 0.32
GNE-204ENST00000539208 TMEM35AQ53FP2 167 aa17.04■□□□□ 0.32
GNE-204ENST00000539208 C6orf120Q7Z4R8 191 aa17.04■□□□□ 0.32
GNE-204ENST00000539208 SMYD1Q8NB12 490 aa17.04■□□□□ 0.32
GNE-204ENST00000539208 OR52J3Q8NH60 311 aa17.04■□□□□ 0.32
GNE-204ENST00000539208 FNDC8Q8TC99 324 aa17.04■□□□□ 0.32
GNE-204ENST00000539208 SLC38A5Q8WUX1 472 aa17.04■□□□□ 0.32
GNE-204ENST00000539208 APOBEC4Q8WW27 367 aaKnown RBP17.04■□□□□ 0.32
GNE-204ENST00000539208 KXD1Q9BQD3 176 aa17.04■□□□□ 0.32
GNE-204ENST00000539208 IGFLR1Q9H665 355 aa17.04■□□□□ 0.32
GNE-204ENST00000539208 NECTIN3Q9NQS3 549 aa17.04■□□□□ 0.32
GNE-204ENST00000539208 RLIMQ9NVW2 624 aa17.04■□□□□ 0.32
GNE-204ENST00000539208 ENOPH1Q9UHY7 261 aa17.04■□□□□ 0.32
GNE-204ENST00000539208 KCND3Q9UK17 655 aa17.04■□□□□ 0.32
GNE-204ENST00000539208 SH3GLB1Q9Y371 365 aa17.04■□□□□ 0.32
GNE-204ENST00000539208 HCN4Q9Y3Q4 1203 aa17.04■□□□□ 0.32
GNE-204ENST00000539208 ZNF451Q9Y4E5 1061 aa17.04■□□□□ 0.32
GNE-204ENST00000539208 A0A0A6YYD5 115 aa17.03■□□□□ 0.32
GNE-204ENST00000539208 C5orf58C9J3I9 102 aa17.03■□□□□ 0.32
GNE-204ENST00000539208 SLC22A1O15245 554 aa17.03■□□□□ 0.32
GNE-204ENST00000539208 IFNW1P05000 195 aa17.03■□□□□ 0.32
GNE-204ENST00000539208 KIR2DL1P43626 348 aaPredicted RBP17.03■□□□□ 0.32
GNE-204ENST00000539208 ST13P50502 369 aaKnown RBP17.03■□□□□ 0.32
GNE-204ENST00000539208 LBX1P52954 281 aa17.03■□□□□ 0.32
GNE-204ENST00000539208 P3H2Q8IVL5 708 aa17.03■□□□□ 0.32
GNE-204ENST00000539208 PARP8Q8N3A8 854 aa17.03■□□□□ 0.32
GNE-204ENST00000539208 MYADMQ96S97 322 aa17.03■□□□□ 0.32
GNE-204ENST00000539208 OSGEPL1Q9H4B0 414 aa17.03■□□□□ 0.32
GNE-204ENST00000539208 MVB12BQ9H7P6 319 aa17.03■□□□□ 0.32
GNE-204ENST00000539208 ZNF556Q9HAH1 456 aa17.03■□□□□ 0.32
GNE-204ENST00000539208 EHD3Q9NZN3 535 aa17.03■□□□□ 0.32
GNE-204ENST00000539208 DGKBQ9Y6T7 804 aa17.03■□□□□ 0.32
GNE-204ENST00000539208 LRIT2A6NDA9 550 aa17.02■□□□□ 0.32
GNE-204ENST00000539208 CACNB4O00305 520 aaPredicted RBP17.02■□□□□ 0.32
GNE-204ENST00000539208 PLRG1O43660 514 aaKnown RBP17.02■□□□□ 0.32
GNE-204ENST00000539208 GADD45GO95257 159 aa17.02■□□□□ 0.32
GNE-204ENST00000539208 BMXP51813 675 aa17.02■□□□□ 0.32
GNE-204ENST00000539208 ZIC1Q15915 447 aa17.02■□□□□ 0.32
GNE-204ENST00000539208 DUSP7Q16829 419 aa17.02■□□□□ 0.32
GNE-204ENST00000539208 FAM180BQ6P0A1 224 aa17.02■□□□□ 0.32
GNE-204ENST00000539208 SYCE2Q6PIF2 218 aa17.02■□□□□ 0.32
GNE-204ENST00000539208 LINC00299Q6ZSB3 139 aa17.02■□□□□ 0.32
GNE-204ENST00000539208 DEPDC4Q8N2C3 294 aa17.02■□□□□ 0.32
GNE-204ENST00000539208 DENND6BQ8NEG7 585 aa17.02■□□□□ 0.32
GNE-204ENST00000539208 EZH1Q92800 747 aaPredicted RBP17.02■□□□□ 0.32
GNE-204ENST00000539208 DNASE1L2Q92874 299 aa17.02■□□□□ 0.32
GNE-204ENST00000539208 NIPSNAP1Q9BPW8 284 aa17.02■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms