RNA–Protein interactions for RNA: ENST00000538545.6

ACTN1-205, Transcript of actinin alpha 1, humanhuman

TSL 1 (best) BASIC

Gene ACTN1, Length 2,813 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-205ENST00000538545 HORMAD2Q8N7B1 307 aa13.4□□□□□ -0.26
ACTN1-205ENST00000538545 RNF31Q96EP0 1072 aa13.4□□□□□ -0.26
ACTN1-205ENST00000538545 RSPO3Q9BXY4 272 aaPredicted RBP13.4□□□□□ -0.26
ACTN1-205ENST00000538545 Q9H521 79 aa13.4□□□□□ -0.26
ACTN1-205ENST00000538545 DDX31Q9H8H2 851 aaKnown RBP13.4□□□□□ -0.26
ACTN1-205ENST00000538545 BATF3Q9NR55 127 aa13.4□□□□□ -0.26
ACTN1-205ENST00000538545 TRNAU1APQ9NX07 287 aaKnown RBP13.4□□□□□ -0.26
ACTN1-205ENST00000538545 PADI4Q9UM07 663 aa13.4□□□□□ -0.26
ACTN1-205ENST00000538545 TSC22D4Q9Y3Q8 395 aa13.4□□□□□ -0.26
ACTN1-205ENST00000538545 PDPK1O15530 556 aa13.4□□□□□ -0.26
ACTN1-205ENST00000538545 SEMA3DO95025 777 aa13.4□□□□□ -0.26
ACTN1-205ENST00000538545 ZNF888P0CJ79 500 aaPredicted RBP13.4□□□□□ -0.26
ACTN1-205ENST00000538545 JUNDP17535 347 aa13.4□□□□□ -0.26
ACTN1-205ENST00000538545 HIST1H1TP22492 207 aaPredicted RBP13.4□□□□□ -0.26
ACTN1-205ENST00000538545 PRIM2P49643 509 aa13.4□□□□□ -0.26
ACTN1-205ENST00000538545 YPEL5P62699 121 aa13.4□□□□□ -0.26
ACTN1-205ENST00000538545 HEPACAMQ14CZ8 416 aa13.4□□□□□ -0.26
ACTN1-205ENST00000538545 ZIC1Q15915 447 aa13.4□□□□□ -0.26
ACTN1-205ENST00000538545 C10orf62Q5T681 223 aaPredicted RBP13.4□□□□□ -0.26
ACTN1-205ENST00000538545 IRAK1BP1Q5VVH5 260 aa13.4□□□□□ -0.26
ACTN1-205ENST00000538545 FCRL6Q6DN72 434 aa13.4□□□□□ -0.26
ACTN1-205ENST00000538545 PAGE2Q7Z2X7 111 aa13.4□□□□□ -0.26
ACTN1-205ENST00000538545 SATL1Q86VE3 508 aa13.4□□□□□ -0.26
ACTN1-205ENST00000538545 CCDC116Q8IYX3 515 aa13.4□□□□□ -0.26
ACTN1-205ENST00000538545 SIMC1Q8NDZ2 872 aa13.4□□□□□ -0.26
ACTN1-205ENST00000538545 KLHDC7BQ96G42 594 aa13.4□□□□□ -0.26
ACTN1-205ENST00000538545 MAPKAP1Q9BPZ7 522 aa13.4□□□□□ -0.26
ACTN1-205ENST00000538545 C1GALT1Q9NS00 363 aa13.4□□□□□ -0.26
ACTN1-205ENST00000538545 SIRT3Q9NTG7 399 aaPredicted RBP13.4□□□□□ -0.26
ACTN1-205ENST00000538545 OLAHQ9NV23 265 aa13.4□□□□□ -0.26
ACTN1-205ENST00000538545 ACTR10Q9NZ32 417 aa13.4□□□□□ -0.26
ACTN1-205ENST00000538545 AASSQ9UDR5 926 aa13.4□□□□□ -0.26
ACTN1-205ENST00000538545 PCOLCE2Q9UKZ9 415 aa13.4□□□□□ -0.26
ACTN1-205ENST00000538545 HEBP2Q9Y5Z4 205 aa13.4□□□□□ -0.26
ACTN1-205ENST00000538545 HS3ST3A1Q9Y663 406 aa13.4□□□□□ -0.26
ACTN1-205ENST00000538545 ARID1BQ8NFD5 2236 aaPredicted RBP13.4□□□□□ -0.26
ACTN1-205ENST00000538545 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa13.4□□□□□ -0.27
ACTN1-205ENST00000538545 M0QX08 132 aa13.4□□□□□ -0.27
ACTN1-205ENST00000538545 TNFRSF10CO14798 259 aa13.4□□□□□ -0.27
ACTN1-205ENST00000538545 B4GAT1O43505 415 aa13.4□□□□□ -0.27
ACTN1-205ENST00000538545 KCNJ13O60928 360 aa13.4□□□□□ -0.27
ACTN1-205ENST00000538545 TNFRSF21O75509 655 aa13.4□□□□□ -0.27
ACTN1-205ENST00000538545 PIGAP37287 484 aa13.4□□□□□ -0.27
ACTN1-205ENST00000538545 GPR19Q15760 415 aa13.4□□□□□ -0.27
ACTN1-205ENST00000538545 DEFB134Q4QY38 66 aa13.4□□□□□ -0.27
ACTN1-205ENST00000538545 PAQR7Q86WK9 346 aa13.4□□□□□ -0.27
ACTN1-205ENST00000538545 GPBAR1Q8TDU6 330 aa13.4□□□□□ -0.27
ACTN1-205ENST00000538545 LRRC61Q9BV99 259 aa13.4□□□□□ -0.27
ACTN1-205ENST00000538545 GLIPR2Q9H4G4 154 aa13.4□□□□□ -0.27
ACTN1-205ENST00000538545 HRASLS2Q9NWW9 162 aa13.4□□□□□ -0.27
ACTN1-205ENST00000538545 SMPD3Q9NY59 655 aaPredicted RBP13.4□□□□□ -0.27
ACTN1-205ENST00000538545 RP1P56715 2156 aa13.4□□□□□ -0.27
ACTN1-205ENST00000538545 PRAMEF25A6NGN4 478 aa13.39□□□□□ -0.27
ACTN1-205ENST00000538545 ATP5A1P25705 553 aaKnown RBP13.39□□□□□ -0.27
ACTN1-205ENST00000538545 DCTP40126 519 aa13.39□□□□□ -0.27
ACTN1-205ENST00000538545 ID2Q02363 134 aa13.39□□□□□ -0.27
ACTN1-205ENST00000538545 SFSWAPQ12872 951 aaKnown RBP13.39□□□□□ -0.27
ACTN1-205ENST00000538545 SCARB2Q14108 478 aa13.39□□□□□ -0.27
ACTN1-205ENST00000538545 CEACAM20Q6UY09 585 aa13.39□□□□□ -0.27
ACTN1-205ENST00000538545 ZDHHC13Q8IUH4 622 aa13.39□□□□□ -0.27
ACTN1-205ENST00000538545 GOT1L1Q8NHS2 421 aaPredicted RBP13.39□□□□□ -0.27
ACTN1-205ENST00000538545 CNRIP1Q96F85 164 aaPredicted RBP13.39□□□□□ -0.27
ACTN1-205ENST00000538545 GUCD1Q96NT3 240 aa13.39□□□□□ -0.27
ACTN1-205ENST00000538545 GRIP2Q9C0E4 1043 aa13.39□□□□□ -0.27
ACTN1-205ENST00000538545 SERHL2Q9H4I8 314 aa13.39□□□□□ -0.27
ACTN1-205ENST00000538545 DNAJB9Q9UBS3 223 aa13.39□□□□□ -0.27
ACTN1-205ENST00000538545 AP1M2Q9Y6Q5 423 aa13.39□□□□□ -0.27
ACTN1-205ENST00000538545 J3KTA2 159 aa13.39□□□□□ -0.27
ACTN1-205ENST00000538545 MAN2B1O00754 1011 aa13.39□□□□□ -0.27
ACTN1-205ENST00000538545 HS6ST1O60243 411 aa13.39□□□□□ -0.27
ACTN1-205ENST00000538545 AIFM1O95831 613 aa13.39□□□□□ -0.27
ACTN1-205ENST00000538545 ALPLP05186 524 aa13.39□□□□□ -0.27
ACTN1-205ENST00000538545 PPM1FP49593 454 aaPredicted RBP13.39□□□□□ -0.27
ACTN1-205ENST00000538545 DMWDQ09019 674 aa13.39□□□□□ -0.27
ACTN1-205ENST00000538545 TSSK4Q6SA08 328 aa13.39□□□□□ -0.27
ACTN1-205ENST00000538545 TSEN54Q7Z6J9 526 aaKnown RBP13.39□□□□□ -0.27
ACTN1-205ENST00000538545 OR52N2Q8NGI0 321 aa13.39□□□□□ -0.27
ACTN1-205ENST00000538545 OR52J3Q8NH60 311 aa13.39□□□□□ -0.27
ACTN1-205ENST00000538545 SPPL2AQ8TCT8 520 aa13.39□□□□□ -0.27
ACTN1-205ENST00000538545 TAMM41Q96BW9 452 aa13.39□□□□□ -0.27
ACTN1-205ENST00000538545 PI4KAP42356 2102 aa13.38□□□□□ -0.27
ACTN1-205ENST00000538545 THADAQ6YHU6 1953 aa13.38□□□□□ -0.27
ACTN1-205ENST00000538545 C10orf142B7Z368 130 aa13.38□□□□□ -0.27
ACTN1-205ENST00000538545 AGRPO00253 132 aa13.38□□□□□ -0.27
ACTN1-205ENST00000538545 KIF1CO43896 1103 aaKnown RBP13.38□□□□□ -0.27
ACTN1-205ENST00000538545 BCHEP06276 602 aa13.38□□□□□ -0.27
ACTN1-205ENST00000538545 CYP4B1P13584 511 aa13.38□□□□□ -0.27
ACTN1-205ENST00000538545 BCKDHBP21953 392 aa13.38□□□□□ -0.27
ACTN1-205ENST00000538545 PCBP4P57723 403 aaKnown RBP13.38□□□□□ -0.27
ACTN1-205ENST00000538545 TXNL4AP83876 142 aaKnown RBP13.38□□□□□ -0.27
ACTN1-205ENST00000538545 SLC9A5Q14940 896 aa13.38□□□□□ -0.27
ACTN1-205ENST00000538545 LTB4RQ15722 352 aa13.38□□□□□ -0.27
ACTN1-205ENST00000538545 SLC36A3Q495N2 470 aa13.38□□□□□ -0.27
ACTN1-205ENST00000538545 SPDYE7PQ495Y7 208 aa13.38□□□□□ -0.27
ACTN1-205ENST00000538545 CBLL1Q75N03 491 aa13.38□□□□□ -0.27
ACTN1-205ENST00000538545 ZNF786Q8N393 782 aa13.38□□□□□ -0.27
ACTN1-205ENST00000538545 METTL25Q8N6Q8 603 aa13.38□□□□□ -0.27
ACTN1-205ENST00000538545 MFSD2AQ8NA29 543 aa13.38□□□□□ -0.27
ACTN1-205ENST00000538545 C11orf65Q8NCR3 313 aa13.38□□□□□ -0.27
ACTN1-205ENST00000538545 OR2L5Q8NG80 312 aa13.38□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 49.4 ms