RNA–Protein interactions for RNA: ENST00000538253.5

PTPN22-211, Transcript of protein tyrosine phosphatase, non-receptor type 22, humanhuman

TSL 1 (best) BASIC

Gene PTPN22, Length 3,575 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN22-211ENST00000538253 SLC16A8O95907 504 aa3.4□□□□□ -1.86
PTPN22-211ENST00000538253 SERPIND1P05546 499 aa3.4□□□□□ -1.86
PTPN22-211ENST00000538253 ATP5A1P25705 553 aaKnown RBP3.4□□□□□ -1.86
PTPN22-211ENST00000538253 GRIA3P42263 894 aa3.4□□□□□ -1.86
PTPN22-211ENST00000538253 ERFP50548 548 aa3.4□□□□□ -1.86
PTPN22-211ENST00000538253 EMP2P54851 167 aa3.4□□□□□ -1.86
PTPN22-211ENST00000538253 RPP30P78346 268 aaKnown RBP3.4□□□□□ -1.86
PTPN22-211ENST00000538253 PTPRCAPQ14761 206 aa3.4□□□□□ -1.86
PTPN22-211ENST00000538253 CASP8Q14790 479 aa3.4□□□□□ -1.86
PTPN22-211ENST00000538253 PFKFB4Q16877 469 aa3.4□□□□□ -1.86
PTPN22-211ENST00000538253 ZNF800Q2TB10 664 aaPredicted RBP eCLIP3.4□□□□□ -1.86
PTPN22-211ENST00000538253 VPS26BQ4G0F5 336 aa3.4□□□□□ -1.86
PTPN22-211ENST00000538253 NKAIN1Q4KMZ8 207 aa3.4□□□□□ -1.86
PTPN22-211ENST00000538253 ZNF658BQ4V348 819 aaPredicted RBP3.4□□□□□ -1.86
PTPN22-211ENST00000538253 KRBOX4Q5JUW0 171 aa3.4□□□□□ -1.86
PTPN22-211ENST00000538253 MZT2AQ6P582 158 aa3.4□□□□□ -1.86
PTPN22-211ENST00000538253 ZNF549Q6P9A3 640 aa3.4□□□□□ -1.86
PTPN22-211ENST00000538253 FAM92BQ6ZTR7 304 aa3.4□□□□□ -1.86
PTPN22-211ENST00000538253 MSANTD1Q6ZTZ1 278 aa3.4□□□□□ -1.86
PTPN22-211ENST00000538253 USP51Q70EK9 711 aa3.4□□□□□ -1.86
PTPN22-211ENST00000538253 USP43Q70EL4 1123 aa3.4□□□□□ -1.86
PTPN22-211ENST00000538253 OVCH1Q7RTY7 1134 aa3.4□□□□□ -1.86
PTPN22-211ENST00000538253 GPR155Q7Z3F1 870 aa3.4□□□□□ -1.86
PTPN22-211ENST00000538253 DSELQ8IZU8 1212 aa3.4□□□□□ -1.86
PTPN22-211ENST00000538253 TAGAPQ8N103 731 aa3.4□□□□□ -1.86
PTPN22-211ENST00000538253 ZNF619Q8N2I2 560 aa3.4□□□□□ -1.86
PTPN22-211ENST00000538253 TMEM156Q8N614 296 aa3.4□□□□□ -1.86
PTPN22-211ENST00000538253 SLC5A8Q8N695 610 aa3.4□□□□□ -1.86
PTPN22-211ENST00000538253 OR4K1Q8NGD4 311 aa3.4□□□□□ -1.86
PTPN22-211ENST00000538253 LILRB4Q8NHJ6 448 aa3.4□□□□□ -1.86
PTPN22-211ENST00000538253 RFWD2Q8NHY2 731 aa3.4□□□□□ -1.86
PTPN22-211ENST00000538253 KCTD4Q8WVF5 259 aa3.4□□□□□ -1.86
PTPN22-211ENST00000538253 EXT2Q93063 718 aa3.4□□□□□ -1.86
PTPN22-211ENST00000538253 ATXN7L3BQ96GX2 97 aa3.4□□□□□ -1.86
PTPN22-211ENST00000538253 ZNF354BQ96LW1 612 aa3.4□□□□□ -1.86
PTPN22-211ENST00000538253 ZNF778Q96MU6 729 aa3.4□□□□□ -1.86
PTPN22-211ENST00000538253 OR2A14Q96R47 310 aa3.4□□□□□ -1.86
PTPN22-211ENST00000538253 LPAR4Q99677 370 aa3.4□□□□□ -1.86
PTPN22-211ENST00000538253 COQ7Q99807 217 aa3.4□□□□□ -1.86
PTPN22-211ENST00000538253 ACTL8Q9H568 366 aa3.4□□□□□ -1.86
PTPN22-211ENST00000538253 RMND5AQ9H871 391 aa3.4□□□□□ -1.86
PTPN22-211ENST00000538253 IPPKQ9H8X2 491 aa3.4□□□□□ -1.86
PTPN22-211ENST00000538253 ANKZF1Q9H8Y5 726 aa3.4□□□□□ -1.86
PTPN22-211ENST00000538253 INTS9Q9NV88 658 aaKnown RBP3.4□□□□□ -1.86
PTPN22-211ENST00000538253 NDE1Q9NXR1 346 aa3.4□□□□□ -1.86
PTPN22-211ENST00000538253 KLHL3Q9UH77 587 aa3.4□□□□□ -1.86
PTPN22-211ENST00000538253 CORO2BQ9UQ03 480 aa3.4□□□□□ -1.86
PTPN22-211ENST00000538253 BTBD3Q9Y2F9 522 aa3.4□□□□□ -1.86
PTPN22-211ENST00000538253 PLLPQ9Y342 182 aa3.4□□□□□ -1.86
PTPN22-211ENST00000538253 RAP2CQ9Y3L5 183 aa3.4□□□□□ -1.86
PTPN22-211ENST00000538253 ZNF780BQ9Y6R6 833 aa3.4□□□□□ -1.86
PTPN22-211ENST00000538253 CACNA1HO95180 2353 aa3.4□□□□□ -1.86
PTPN22-211ENST00000538253 C15orf38-AP3S2A0A0A6YYH1 394 aa3.4□□□□□ -1.87
PTPN22-211ENST00000538253 C1orf226A1L170 272 aa3.4□□□□□ -1.87
PTPN22-211ENST00000538253 KLF11O14901 512 aa3.4□□□□□ -1.87
PTPN22-211ENST00000538253 AZIN1O14977 448 aa3.4□□□□□ -1.87
PTPN22-211ENST00000538253 NDUFS4O43181 175 aa3.4□□□□□ -1.87
PTPN22-211ENST00000538253 ECDO95905 644 aaPredicted RBP3.4□□□□□ -1.87
PTPN22-211ENST00000538253 AK1P00568 194 aa3.4□□□□□ -1.87
PTPN22-211ENST00000538253 RPS17P08708 135 aaKnown RBP3.4□□□□□ -1.87
PTPN22-211ENST00000538253 SLC35E2BP0CK96 405 aa3.4□□□□□ -1.87
PTPN22-211ENST00000538253 HSMCR30P0CW71 290 aa3.4□□□□□ -1.87
PTPN22-211ENST00000538253 GIMD1P0DJR0 217 aa3.4□□□□□ -1.87
PTPN22-211ENST00000538253 CDH1P12830 882 aa3.4□□□□□ -1.87
PTPN22-211ENST00000538253 TCEA1P23193 301 aaKnown RBP3.4□□□□□ -1.87
PTPN22-211ENST00000538253 EEF1DP29692 281 aaKnown RBP3.4□□□□□ -1.87
PTPN22-211ENST00000538253 PDHA2P29803 388 aa3.4□□□□□ -1.87
PTPN22-211ENST00000538253 SLC5A2P31639 672 aa3.4□□□□□ -1.87
PTPN22-211ENST00000538253 RCVRNP35243 200 aa3.4□□□□□ -1.87
PTPN22-211ENST00000538253 NKX2-5P52952 324 aaPredicted RBP3.4□□□□□ -1.87
PTPN22-211ENST00000538253 ARFIP2P53365 341 aa3.4□□□□□ -1.87
PTPN22-211ENST00000538253 CDKN2DP55273 166 aa3.4□□□□□ -1.87
PTPN22-211ENST00000538253 EEF1A1P68104 462 aaKnown RBP3.4□□□□□ -1.87
PTPN22-211ENST00000538253 ELF3P78545 371 aaPredicted RBP3.4□□□□□ -1.87
PTPN22-211ENST00000538253 CLCQ05315 142 aa3.4□□□□□ -1.87
PTPN22-211ENST00000538253 EEF1A2Q05639 463 aaKnown RBP3.4□□□□□ -1.87
PTPN22-211ENST00000538253 STX4Q12846 297 aa3.4□□□□□ -1.87
PTPN22-211ENST00000538253 AIMP2Q13155 320 aaKnown RBP3.4□□□□□ -1.87
PTPN22-211ENST00000538253 IHHQ14623 411 aa3.4□□□□□ -1.87
PTPN22-211ENST00000538253 KHDC1Q4VXA5 237 aaKnown RBP3.4□□□□□ -1.87
PTPN22-211ENST00000538253 RFTN2Q52LD8 501 aaPredicted RBP3.4□□□□□ -1.87
PTPN22-211ENST00000538253 TBCELQ5QJ74 424 aa3.4□□□□□ -1.87
PTPN22-211ENST00000538253 WASHC2DQ5SRD0 308 aa3.4□□□□□ -1.87
PTPN22-211ENST00000538253 TPRG1LQ5T0D9 272 aa3.4□□□□□ -1.87
PTPN22-211ENST00000538253 ZNF648Q5T619 568 aaPredicted RBP3.4□□□□□ -1.87
PTPN22-211ENST00000538253 EEF1A1P5Q5VTE0 462 aa3.4□□□□□ -1.87
PTPN22-211ENST00000538253 SUSD1Q6UWL2 747 aa3.4□□□□□ -1.87
PTPN22-211ENST00000538253 LAYNQ6UX15 382 aa3.4□□□□□ -1.87
PTPN22-211ENST00000538253 LDB1Q86U70 411 aaPredicted RBP3.4□□□□□ -1.87
PTPN22-211ENST00000538253 ST13P4Q8IZP2 240 aaPredicted RBP3.4□□□□□ -1.87
PTPN22-211ENST00000538253 SLC15A4Q8N697 577 aa3.4□□□□□ -1.87
PTPN22-211ENST00000538253 POGLUT1Q8NBL1 392 aa3.4□□□□□ -1.87
PTPN22-211ENST00000538253 OR2A1Q8NGT9 310 aa3.4□□□□□ -1.87
PTPN22-211ENST00000538253 APOBEC4Q8WW27 367 aaKnown RBP3.4□□□□□ -1.87
PTPN22-211ENST00000538253 VOPP1Q96AW1 172 aa3.4□□□□□ -1.87
PTPN22-211ENST00000538253 NXNL1Q96CM4 212 aa3.4□□□□□ -1.87
PTPN22-211ENST00000538253 ATOH8Q96SQ7 321 aa3.4□□□□□ -1.87
PTPN22-211ENST00000538253 SCNM1Q9BWG6 230 aa3.4□□□□□ -1.87
PTPN22-211ENST00000538253 ARMC7Q9H6L4 198 aa3.4□□□□□ -1.87
PTPN22-211ENST00000538253 SIDT1Q9NXL6 827 aaKnown RBP3.4□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms