RNA–Protein interactions for RNA: ENST00000537824.2

CSMD1-215, Transcript of CUB and Sushi multiple domains 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CSMD1, Length 13,512 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1-215ENST00000537824 RASGEF1BQ0VAM2 473 aa5.47□□□□□ -1.53
CSMD1-215ENST00000537824 SLC36A3Q495N2 470 aa5.47□□□□□ -1.53
CSMD1-215ENST00000537824 FOXR2Q6PJQ5 311 aa5.47□□□□□ -1.53
CSMD1-215ENST00000537824 PUM2Q8TB72 1066 aaKnown RBP eCLIP5.47□□□□□ -1.53
CSMD1-215ENST00000537824 FANK1Q8TC84 345 aa5.47□□□□□ -1.53
CSMD1-215ENST00000537824 GRHL3Q8TE85 626 aa5.47□□□□□ -1.53
CSMD1-215ENST00000537824 ZDHHC1Q8WTX9 485 aa5.47□□□□□ -1.53
CSMD1-215ENST00000537824 NSMAFQ92636 917 aa5.47□□□□□ -1.53
CSMD1-215ENST00000537824 OR2M2Q96R28 347 aa5.47□□□□□ -1.53
CSMD1-215ENST00000537824 HRH4Q9H3N8 390 aa5.47□□□□□ -1.53
CSMD1-215ENST00000537824 PTGDR2Q9Y5Y4 395 aa5.47□□□□□ -1.53
CSMD1-215ENST00000537824 AP1M2Q9Y6Q5 423 aa5.47□□□□□ -1.53
CSMD1-215ENST00000537824 UBR1Q8IWV7 1749 aa5.47□□□□□ -1.53
CSMD1-215ENST00000537824 TGFB1I1O43294 461 aa5.46□□□□□ -1.53
CSMD1-215ENST00000537824 SIX3O95343 332 aaPredicted RBP5.46□□□□□ -1.53
CSMD1-215ENST00000537824 ZNF823P16415 610 aa5.46□□□□□ -1.53
CSMD1-215ENST00000537824 CACNG1Q06432 222 aa5.46□□□□□ -1.53
CSMD1-215ENST00000537824 CHIT1Q13231 466 aa5.46□□□□□ -1.53
CSMD1-215ENST00000537824 DALRD3Q5D0E6 543 aaKnown RBP5.46□□□□□ -1.53
CSMD1-215ENST00000537824 SLC29A4Q7RTT9 530 aa5.46□□□□□ -1.53
CSMD1-215ENST00000537824 PIGZQ86VD9 579 aa5.46□□□□□ -1.53
CSMD1-215ENST00000537824 XYLT1Q86Y38 959 aa5.46□□□□□ -1.53
CSMD1-215ENST00000537824 CMIPQ8IY22 773 aa5.46□□□□□ -1.53
CSMD1-215ENST00000537824 ADAD1Q96M93 576 aaKnown RBP5.46□□□□□ -1.53
CSMD1-215ENST00000537824 KIAA1522Q9P206 1035 aaPredicted RBP5.46□□□□□ -1.53
CSMD1-215ENST00000537824 MED6O75586 246 aa5.46□□□□□ -1.53
CSMD1-215ENST00000537824 NAT2P11245 290 aa5.46□□□□□ -1.53
CSMD1-215ENST00000537824 EDNRBP24530 442 aa5.46□□□□□ -1.53
CSMD1-215ENST00000537824 SOX2P48431 317 aa5.46□□□□□ -1.53
CSMD1-215ENST00000537824 POU6F2P78424 691 aaPredicted RBP5.46□□□□□ -1.53
CSMD1-215ENST00000537824 COTL1Q14019 142 aa5.46□□□□□ -1.53
CSMD1-215ENST00000537824 GNMTQ14749 295 aa5.46□□□□□ -1.53
CSMD1-215ENST00000537824 HMGN3Q15651 99 aa5.46□□□□□ -1.53
CSMD1-215ENST00000537824 REEP3Q6NUK4 255 aa5.46□□□□□ -1.53
CSMD1-215ENST00000537824 ASB4Q9Y574 426 aa5.46□□□□□ -1.53
CSMD1-215ENST00000537824 A0A0U1RQK1 487 aa5.46□□□□□ -1.53
CSMD1-215ENST00000537824 hCG_1807616A0A1W2PRN6 198 aa5.46□□□□□ -1.53
CSMD1-215ENST00000537824 SHOXO15266 292 aa5.46□□□□□ -1.53
CSMD1-215ENST00000537824 SCO1O75880 301 aa5.46□□□□□ -1.53
CSMD1-215ENST00000537824 FABP1P07148 127 aa5.46□□□□□ -1.53
CSMD1-215ENST00000537824 ZNF16P17020 682 aaPredicted RBP5.46□□□□□ -1.53
CSMD1-215ENST00000537824 PRPS1L1P21108 318 aa5.46□□□□□ -1.53
CSMD1-215ENST00000537824 UBE2KP61086 200 aa5.46□□□□□ -1.53
CSMD1-215ENST00000537824 ZNF169Q14929 603 aaPredicted RBP5.46□□□□□ -1.53
CSMD1-215ENST00000537824 DUSP6Q16828 381 aa5.46□□□□□ -1.53
CSMD1-215ENST00000537824 SFRP4Q6FHJ7 346 aaPredicted RBP5.46□□□□□ -1.53
CSMD1-215ENST00000537824 NIPA1Q7RTP0 329 aa5.46□□□□□ -1.53
CSMD1-215ENST00000537824 CFAP52Q8N1V2 620 aa5.46□□□□□ -1.53
CSMD1-215ENST00000537824 KCT2Q8NC54 265 aa5.46□□□□□ -1.53
CSMD1-215ENST00000537824 PXT1Q8NFP0 134 aa5.46□□□□□ -1.53
CSMD1-215ENST00000537824 OR7G3Q8NG95 312 aa5.46□□□□□ -1.53
CSMD1-215ENST00000537824 FRZBQ92765 325 aa5.46□□□□□ -1.53
CSMD1-215ENST00000537824 AJAP1Q9UKB5 411 aaPredicted RBP5.46□□□□□ -1.53
CSMD1-215ENST00000537824 FZD4Q9ULV1 537 aa5.46□□□□□ -1.53
CSMD1-215ENST00000537824 B3GALT1Q9Y5Z6 326 aa5.46□□□□□ -1.53
CSMD1-215ENST00000537824 ABCA2Q9BZC7 2435 aa5.46□□□□□ -1.54
CSMD1-215ENST00000537824 OR6C6A6NF89 314 aa5.46□□□□□ -1.54
CSMD1-215ENST00000537824 EIF1AYO14602 144 aaKnown RBP5.46□□□□□ -1.54
CSMD1-215ENST00000537824 TLL1O43897 1013 aa5.46□□□□□ -1.54
CSMD1-215ENST00000537824 PCDH7O60245 1069 aa5.46□□□□□ -1.54
CSMD1-215ENST00000537824 RBBP9O75884 186 aa5.46□□□□□ -1.54
CSMD1-215ENST00000537824 UGT2B7P16662 529 aa5.46□□□□□ -1.54
CSMD1-215ENST00000537824 EIF1AXP47813 144 aaKnown RBP5.46□□□□□ -1.54
CSMD1-215ENST00000537824 LSSP48449 732 aa5.46□□□□□ -1.54
CSMD1-215ENST00000537824 CHRFAM7AQ494W8 412 aa5.46□□□□□ -1.54
CSMD1-215ENST00000537824 GSG1LQ6UXU4 331 aa5.46□□□□□ -1.54
CSMD1-215ENST00000537824 ZBED3Q96IU2 234 aaPredicted RBP5.46□□□□□ -1.54
CSMD1-215ENST00000537824 KCNA7Q96RP8 456 aa5.46□□□□□ -1.54
CSMD1-215ENST00000537824 SLC28A3Q9HAS3 691 aa5.46□□□□□ -1.54
CSMD1-215ENST00000537824 FAM170BA6NMN3 283 aa5.46□□□□□ -1.54
CSMD1-215ENST00000537824 MANBAO00462 879 aa5.46□□□□□ -1.54
CSMD1-215ENST00000537824 DUSP4Q13115 394 aa5.46□□□□□ -1.54
CSMD1-215ENST00000537824 GPR157Q5UAW9 335 aa5.46□□□□□ -1.54
CSMD1-215ENST00000537824 CEACAM20Q6UY09 585 aa5.46□□□□□ -1.54
CSMD1-215ENST00000537824 ZBED6CLQ96FA7 236 aaPredicted RBP5.46□□□□□ -1.54
CSMD1-215ENST00000537824 ANKRD60Q9BZ19 345 aa5.46□□□□□ -1.54
CSMD1-215ENST00000537824 MYNNQ9NPC7 610 aa5.46□□□□□ -1.54
CSMD1-215ENST00000537824 GNG13Q9P2W3 67 aa5.46□□□□□ -1.54
CSMD1-215ENST00000537824 PCDHGB5Q9Y5G0 923 aa5.46□□□□□ -1.54
CSMD1-215ENST00000537824 MAGEB4O15481 346 aaPredicted RBP5.46□□□□□ -1.54
CSMD1-215ENST00000537824 HSPA12AO43301 675 aa5.46□□□□□ -1.54
CSMD1-215ENST00000537824 PQBP1O60828 265 aaKnown RBP5.46□□□□□ -1.54
CSMD1-215ENST00000537824 EEDO75530 441 aaKnown RBP5.46□□□□□ -1.54
CSMD1-215ENST00000537824 SC5DO75845 299 aa5.46□□□□□ -1.54
CSMD1-215ENST00000537824 PIGRP01833 764 aa5.46□□□□□ -1.54
CSMD1-215ENST00000537824 MT-ND4P03905 459 aa5.46□□□□□ -1.54
CSMD1-215ENST00000537824 AKR1C4P17516 323 aa5.46□□□□□ -1.54
CSMD1-215ENST00000537824 SYN1P17600 705 aa5.46□□□□□ -1.54
CSMD1-215ENST00000537824 ITPKBP27987 946 aa5.46□□□□□ -1.54
CSMD1-215ENST00000537824 SELPLGQ14242 412 aa5.46□□□□□ -1.54
CSMD1-215ENST00000537824 TSTD2Q5T7W7 516 aa5.46□□□□□ -1.54
CSMD1-215ENST00000537824 CELF2-AS1Q8N7Q2 184 aa5.46□□□□□ -1.54
CSMD1-215ENST00000537824 OR5AK3PQ8NH89 298 aa5.46□□□□□ -1.54
CSMD1-215ENST00000537824 FRS2Q8WU20 508 aa5.46□□□□□ -1.54
CSMD1-215ENST00000537824 SLAMF9Q96A28 289 aa5.46□□□□□ -1.54
CSMD1-215ENST00000537824 FCRL2Q96LA5 508 aaPredicted RBP5.46□□□□□ -1.54
CSMD1-215ENST00000537824 PIP5K1AQ99755 562 aa5.46□□□□□ -1.54
CSMD1-215ENST00000537824 SLC29A3Q9BZD2 475 aa5.46□□□□□ -1.54
CSMD1-215ENST00000537824 PCTPQ9UKL6 214 aa5.46□□□□□ -1.54
CSMD1-215ENST00000537824 RUVBL1Q9Y265 456 aaKnown RBP5.46□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms