RNA–Protein interactions for RNA: ENST00000537194.6

SMAD3-203, Transcript of SMAD family member 3, humanhuman

TSL 1 (best) BASIC

Gene SMAD3, Length 1,147 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-203ENST00000537194 SDAD1Q9NVU7 687 aaKnown RBP eCLIP8.3□□□□□ -1.08
SMAD3-203ENST00000537194 WWOXQ9NZC7 414 aa8.3□□□□□ -1.08
SMAD3-203ENST00000537194 GPRC5BQ9NZH0 403 aa8.3□□□□□ -1.08
SMAD3-203ENST00000537194 TXNDC16Q9P2K2 825 aa8.3□□□□□ -1.08
SMAD3-203ENST00000537194 BOKQ9UMX3 212 aaPredicted RBP8.3□□□□□ -1.08
SMAD3-203ENST00000537194 OARD1Q9Y530 152 aa8.3□□□□□ -1.08
SMAD3-203ENST00000537194 TRGV5A0A0B4J1U4 118 aa8.29□□□□□ -1.08
SMAD3-203ENST00000537194 ATP6AP2A0A1C7CYW4 349 aa8.29□□□□□ -1.08
SMAD3-203ENST00000537194 FAM221AA4D161 298 aa8.29□□□□□ -1.08
SMAD3-203ENST00000537194 LRIT2A6NDA9 550 aa8.29□□□□□ -1.08
SMAD3-203ENST00000537194 NPEPPSL1A6NEC2 478 aa8.29□□□□□ -1.08
SMAD3-203ENST00000537194 HSPB2A8KAH6 182 aa8.29□□□□□ -1.08
SMAD3-203ENST00000537194 ESPNB1AK53 854 aa8.29□□□□□ -1.08
SMAD3-203ENST00000537194 C17orf105B2RV13 164 aa8.29□□□□□ -1.08
SMAD3-203ENST00000537194 AQP7O14520 342 aa8.29□□□□□ -1.08
SMAD3-203ENST00000537194 HCN1O60741 890 aa8.29□□□□□ -1.08
SMAD3-203ENST00000537194 ATP6AP2O75787 350 aa8.29□□□□□ -1.08
SMAD3-203ENST00000537194 OR6B1O95007 311 aa8.29□□□□□ -1.08
SMAD3-203ENST00000537194 IGHG3P01860 377 aa8.29□□□□□ -1.08
SMAD3-203ENST00000537194 ZNF37AP17032 561 aaPredicted RBP8.29□□□□□ -1.08
SMAD3-203ENST00000537194 GABRB3P28472 473 aa8.29□□□□□ -1.08
SMAD3-203ENST00000537194 TLX1P31314 330 aaPredicted RBP8.29□□□□□ -1.08
SMAD3-203ENST00000537194 DNAJA1P31689 397 aaKnown RBP8.29□□□□□ -1.08
SMAD3-203ENST00000537194 KIR2DL3P43628 341 aa8.29□□□□□ -1.08
SMAD3-203ENST00000537194 RPL21P46778 160 aaKnown RBP8.29□□□□□ -1.08
SMAD3-203ENST00000537194 KCNC1P48547 511 aa8.29□□□□□ -1.08
SMAD3-203ENST00000537194 HK2P52789 917 aa8.29□□□□□ -1.08
SMAD3-203ENST00000537194 DGKQP52824 942 aa8.29□□□□□ -1.08
SMAD3-203ENST00000537194 ARL4CP56559 192 aa8.29□□□□□ -1.08
SMAD3-203ENST00000537194 KCNJ2P63252 427 aa8.29□□□□□ -1.08
SMAD3-203ENST00000537194 TFF3Q07654 80 aa8.29□□□□□ -1.08
SMAD3-203ENST00000537194 RUNX2Q13950 521 aa8.29□□□□□ -1.08
SMAD3-203ENST00000537194 MORF4L2Q15014 288 aa8.29□□□□□ -1.08
SMAD3-203ENST00000537194 HSPB2Q16082 182 aa8.29□□□□□ -1.08
SMAD3-203ENST00000537194 KCTD19Q17RG1 926 aaPredicted RBP8.29□□□□□ -1.08
SMAD3-203ENST00000537194 ZNF750Q32MQ0 723 aa8.29□□□□□ -1.08
SMAD3-203ENST00000537194 C1orf185Q5T7R7 199 aa8.29□□□□□ -1.08
SMAD3-203ENST00000537194 SLC22A10Q63ZE4 541 aa8.29□□□□□ -1.08
SMAD3-203ENST00000537194 SYDE1Q6ZW31 735 aaPredicted RBP8.29□□□□□ -1.08
SMAD3-203ENST00000537194 TRILQ7L0X0 811 aa8.29□□□□□ -1.08
SMAD3-203ENST00000537194 SPNS2Q8IVW8 549 aa8.29□□□□□ -1.08
SMAD3-203ENST00000537194 DND1Q8IYX4 353 aaKnown RBP8.29□□□□□ -1.08
SMAD3-203ENST00000537194 SNX31Q8N9S9 440 aa8.29□□□□□ -1.08
SMAD3-203ENST00000537194 ACTRT1Q8TDG2 376 aa8.29□□□□□ -1.08
SMAD3-203ENST00000537194 UBE2E3Q969T4 207 aa8.29□□□□□ -1.08
SMAD3-203ENST00000537194 TSPAN17Q96FV3 270 aa8.29□□□□□ -1.08
SMAD3-203ENST00000537194 KCNC2Q96PR1 638 aa8.29□□□□□ -1.08
SMAD3-203ENST00000537194 RASL10BQ96S79 203 aa8.29□□□□□ -1.08
SMAD3-203ENST00000537194 FOXC2Q99958 501 aa8.29□□□□□ -1.08
SMAD3-203ENST00000537194 TTYH2Q9BSA4 534 aa8.29□□□□□ -1.08
SMAD3-203ENST00000537194 SPNS1Q9H2V7 528 aa8.29□□□□□ -1.08
SMAD3-203ENST00000537194 EHD1Q9H4M9 534 aa8.29□□□□□ -1.08
SMAD3-203ENST00000537194 LIN28AQ9H9Z2 209 aaKnown RBP8.29□□□□□ -1.08
SMAD3-203ENST00000537194 LYRM4Q9HD34 91 aa8.29□□□□□ -1.08
SMAD3-203ENST00000537194 PNPLA3Q9NST1 481 aa8.29□□□□□ -1.08
SMAD3-203ENST00000537194 DNAJC11Q9NVH1 559 aa8.29□□□□□ -1.08
SMAD3-203ENST00000537194 VTI1BQ9UEU0 232 aa8.29□□□□□ -1.08
SMAD3-203ENST00000537194 DAPP1Q9UN19 280 aa8.29□□□□□ -1.08
SMAD3-203ENST00000537194 CHMP2BQ9UQN3 213 aa8.29□□□□□ -1.08
SMAD3-203ENST00000537194 PPP2R2CQ9Y2T4 447 aa8.29□□□□□ -1.08
SMAD3-203ENST00000537194 SEC23IPQ9Y6Y8 1000 aaKnown RBP8.29□□□□□ -1.08
SMAD3-203ENST00000537194 CSMD2Q7Z408 3487 aa8.28□□□□□ -1.08
SMAD3-203ENST00000537194 ZFHX3Q15911 3703 aa8.28□□□□□ -1.08
SMAD3-203ENST00000537194 FAM95CA0A1B0GW59 222 aa8.28□□□□□ -1.08
SMAD3-203ENST00000537194 NCF1BA6NI72 391 aaPredicted RBP8.28□□□□□ -1.08
SMAD3-203ENST00000537194 NCF1CA8MVU1 366 aaPredicted RBP8.28□□□□□ -1.08
SMAD3-203ENST00000537194 CAPN14A8MX76 684 aa8.28□□□□□ -1.08
SMAD3-203ENST00000537194 G3V3Y1 287 aa8.28□□□□□ -1.08
SMAD3-203ENST00000537194 CDC7O00311 574 aa8.28□□□□□ -1.08
SMAD3-203ENST00000537194 DVL2O14641 736 aa8.28□□□□□ -1.08
SMAD3-203ENST00000537194 ZNF500O60304 480 aaPredicted RBP8.28□□□□□ -1.08
SMAD3-203ENST00000537194 NCF1P14598 390 aaPredicted RBP8.28□□□□□ -1.08
SMAD3-203ENST00000537194 PPP2R1BP30154 601 aa8.28□□□□□ -1.08
SMAD3-203ENST00000537194 UQCRC1P31930 480 aa8.28□□□□□ -1.08
SMAD3-203ENST00000537194 HNRNPH1P31943 449 aaKnown RBP8.28□□□□□ -1.08
SMAD3-203ENST00000537194 ELK3P41970 407 aa8.28□□□□□ -1.08
SMAD3-203ENST00000537194 MAGEA5P43359 124 aa8.28□□□□□ -1.08
SMAD3-203ENST00000537194 LIM2P55344 173 aa8.28□□□□□ -1.08
SMAD3-203ENST00000537194 RNF4P78317 190 aa8.28□□□□□ -1.08
SMAD3-203ENST00000537194 MGAT5Q09328 741 aa8.28□□□□□ -1.08
SMAD3-203ENST00000537194 TSNQ15631 228 aaKnown RBP8.28□□□□□ -1.08
SMAD3-203ENST00000537194 AP5B1Q2VPB7 878 aa8.28□□□□□ -1.08
SMAD3-203ENST00000537194 XKR6Q5GH73 641 aa8.28□□□□□ -1.08
SMAD3-203ENST00000537194 SULT1C3Q6IMI6 304 aa8.28□□□□□ -1.08
SMAD3-203ENST00000537194 SLCO4C1Q6ZQN7 724 aa8.28□□□□□ -1.08
SMAD3-203ENST00000537194 CHSY3Q70JA7 882 aa8.28□□□□□ -1.08
SMAD3-203ENST00000537194 GPSM1Q86YR5 675 aa8.28□□□□□ -1.08
SMAD3-203ENST00000537194 ZZZ3Q8IYH5 903 aa8.28□□□□□ -1.08
SMAD3-203ENST00000537194 AGGF1Q8N302 714 aaeCLIP8.28□□□□□ -1.08
SMAD3-203ENST00000537194 FBXW8Q8N3Y1 598 aa8.28□□□□□ -1.08
SMAD3-203ENST00000537194 TMEM251Q8N6I4 163 aa8.28□□□□□ -1.08
SMAD3-203ENST00000537194 SREK1Q8WXA9 508 aaKnown RBP8.28□□□□□ -1.08
SMAD3-203ENST00000537194 CDKL2Q92772 493 aa8.28□□□□□ -1.08
SMAD3-203ENST00000537194 PTCD3Q96EY7 689 aaKnown RBP8.28□□□□□ -1.08
SMAD3-203ENST00000537194 RBM18Q96H35 190 aaKnown RBP8.28□□□□□ -1.08
SMAD3-203ENST00000537194 DGAT2Q96PD7 388 aa8.28□□□□□ -1.08
SMAD3-203ENST00000537194 TBCDQ9BTW9 1192 aa8.28□□□□□ -1.08
SMAD3-203ENST00000537194 EFCAB11Q9BUY7 163 aa8.28□□□□□ -1.08
SMAD3-203ENST00000537194 PHACTR1Q9C0D0 580 aa8.28□□□□□ -1.08
SMAD3-203ENST00000537194 DEPPQ9NTK1 212 aa8.28□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms