RNA–Protein interactions for RNA: ENST00000536782.2

TNFRSF1B-204, Transcript of TNF receptor superfamily member 1B, humanhuman

TSL 1 (best) BASIC

Gene TNFRSF1B, Length 557 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1B-204ENST00000536782 MEX3BQ6ZN04 569 aaKnown RBP18.28■□□□□ 0.52
TNFRSF1B-204ENST00000536782 CEP128Q6ZU80 1094 aa18.28■□□□□ 0.52
TNFRSF1B-204ENST00000536782 ACBD4Q8NC06 268 aa18.28■□□□□ 0.52
TNFRSF1B-204ENST00000536782 MORN4Q8NDC4 146 aa18.28■□□□□ 0.52
TNFRSF1B-204ENST00000536782 OR14A16Q8NHC5 309 aa18.28■□□□□ 0.52
TNFRSF1B-204ENST00000536782 KIAA1191Q96A73 305 aa18.28■□□□□ 0.52
TNFRSF1B-204ENST00000536782 KCNC2Q96PR1 638 aa18.28■□□□□ 0.52
TNFRSF1B-204ENST00000536782 F2RL3Q96RI0 385 aa18.28■□□□□ 0.52
TNFRSF1B-204ENST00000536782 KRT12Q99456 494 aa18.28■□□□□ 0.52
TNFRSF1B-204ENST00000536782 NAPGQ99747 312 aaPredicted RBP18.28■□□□□ 0.52
TNFRSF1B-204ENST00000536782 CPNE1Q99829 537 aa18.28■□□□□ 0.52
TNFRSF1B-204ENST00000536782 ALOXE3Q9BYJ1 711 aa18.28■□□□□ 0.52
TNFRSF1B-204ENST00000536782 ROGDIQ9GZN7 287 aa18.28■□□□□ 0.52
TNFRSF1B-204ENST00000536782 DEFB127Q9H1M4 99 aa18.28■□□□□ 0.52
TNFRSF1B-204ENST00000536782 PRDM7Q9NQW5 492 aa18.28■□□□□ 0.52
TNFRSF1B-204ENST00000536782 VTI1BQ9UEU0 232 aa18.28■□□□□ 0.52
TNFRSF1B-204ENST00000536782 ITGB1BP2Q9UKP3 347 aa18.28■□□□□ 0.52
TNFRSF1B-204ENST00000536782 HRH3Q9Y5N1 445 aa18.28■□□□□ 0.52
TNFRSF1B-204ENST00000536782 ZFHX3Q15911 3703 aa18.27■□□□□ 0.52
TNFRSF1B-204ENST00000536782 CXorf49A8MYA2 514 aaPredicted RBP18.27■□□□□ 0.52
TNFRSF1B-204ENST00000536782 ACOT7O00154 380 aa18.27■□□□□ 0.52
TNFRSF1B-204ENST00000536782 WWP2O00308 870 aa18.27■□□□□ 0.52
TNFRSF1B-204ENST00000536782 OR6B1O95007 311 aa18.27■□□□□ 0.52
TNFRSF1B-204ENST00000536782 S100BP04271 92 aaPredicted RBP18.27■□□□□ 0.52
TNFRSF1B-204ENST00000536782 TNNI3P19429 210 aa18.27■□□□□ 0.52
TNFRSF1B-204ENST00000536782 CAPN3P20807 821 aa18.27■□□□□ 0.52
TNFRSF1B-204ENST00000536782 SSTR1P30872 391 aa18.27■□□□□ 0.52
TNFRSF1B-204ENST00000536782 PPIAP62937 165 aaKnown RBP18.27■□□□□ 0.52
TNFRSF1B-204ENST00000536782 PLGLB1Q02325 96 aa18.27■□□□□ 0.52
TNFRSF1B-204ENST00000536782 OR4D1Q15615 310 aa18.27■□□□□ 0.52
TNFRSF1B-204ENST00000536782 MARVELD2Q8N4S9 558 aa18.27■□□□□ 0.52
TNFRSF1B-204ENST00000536782 PDPRQ8NCN5 879 aa18.27■□□□□ 0.52
TNFRSF1B-204ENST00000536782 SRFBP1Q8NEF9 429 aaKnown RBP18.27■□□□□ 0.52
TNFRSF1B-204ENST00000536782 OR2M7Q8NG81 312 aa18.27■□□□□ 0.52
TNFRSF1B-204ENST00000536782 PTPMT1Q8WUK0 201 aaPredicted RBP18.27■□□□□ 0.52
TNFRSF1B-204ENST00000536782 ASB5Q8WWX0 329 aa18.27■□□□□ 0.52
TNFRSF1B-204ENST00000536782 RASL10BQ96S79 203 aa18.27■□□□□ 0.52
TNFRSF1B-204ENST00000536782 GPR22Q99680 433 aa18.27■□□□□ 0.52
TNFRSF1B-204ENST00000536782 RBBP8Q99708 897 aa18.27■□□□□ 0.52
TNFRSF1B-204ENST00000536782 LYRM4Q9HD34 91 aa18.27■□□□□ 0.52
TNFRSF1B-204ENST00000536782 PTBP2Q9UKA9 531 aaKnown RBP18.27■□□□□ 0.52
TNFRSF1B-204ENST00000536782 MYOCOSA0A1B0GUC4 107 aa18.26■□□□□ 0.51
TNFRSF1B-204ENST00000536782 CCNT2O60583 730 aaKnown RBP18.26■□□□□ 0.51
TNFRSF1B-204ENST00000536782 CD22P20273 847 aa18.26■□□□□ 0.51
TNFRSF1B-204ENST00000536782 SOX3P41225 446 aa18.26■□□□□ 0.51
TNFRSF1B-204ENST00000536782 KRTAP10-9P60411 292 aa18.26■□□□□ 0.51
TNFRSF1B-204ENST00000536782 IRF8Q02556 426 aa18.26■□□□□ 0.51
TNFRSF1B-204ENST00000536782 TLE4Q04727 773 aa18.26■□□□□ 0.51
TNFRSF1B-204ENST00000536782 CALCOCO2Q13137 446 aa18.26■□□□□ 0.51
TNFRSF1B-204ENST00000536782 CHIT1Q13231 466 aa18.26■□□□□ 0.51
TNFRSF1B-204ENST00000536782 SERTAD2Q14140 314 aa18.26■□□□□ 0.51
TNFRSF1B-204ENST00000536782 RGS9BPQ6ZS82 235 aa18.26■□□□□ 0.51
TNFRSF1B-204ENST00000536782 SREK1Q8WXA9 508 aaKnown RBP18.26■□□□□ 0.51
TNFRSF1B-204ENST00000536782 TBCDQ9BTW9 1192 aa18.26■□□□□ 0.51
TNFRSF1B-204ENST00000536782 OR8D2Q9GZM6 311 aa18.26■□□□□ 0.51
TNFRSF1B-204ENST00000536782 PRM3Q9NNZ6 103 aa18.26■□□□□ 0.51
TNFRSF1B-204ENST00000536782 SAYSD1Q9NPB0 183 aa18.26■□□□□ 0.51
TNFRSF1B-204ENST00000536782 RNF14Q9UBS8 474 aa18.26■□□□□ 0.51
TNFRSF1B-204ENST00000536782 RNF112Q9ULX5 631 aa18.26■□□□□ 0.51
TNFRSF1B-204ENST00000536782 PINLYPA6NC86 204 aa18.25■□□□□ 0.51
TNFRSF1B-204ENST00000536782 C17orf105B2RV13 164 aa18.25■□□□□ 0.51
TNFRSF1B-204ENST00000536782 EIF3HO15372 352 aaKnown RBP eCLIP18.25■□□□□ 0.51
TNFRSF1B-204ENST00000536782 LDB3O75112 727 aa18.25■□□□□ 0.51
TNFRSF1B-204ENST00000536782 CHRNB4P30926 498 aa18.25■□□□□ 0.51
TNFRSF1B-204ENST00000536782 GP5P40197 560 aa18.25■□□□□ 0.51
TNFRSF1B-204ENST00000536782 MSH2P43246 934 aa18.25■□□□□ 0.51
TNFRSF1B-204ENST00000536782 HK2P52789 917 aa18.25■□□□□ 0.51
TNFRSF1B-204ENST00000536782 RNF4P78317 190 aa18.25■□□□□ 0.51
TNFRSF1B-204ENST00000536782 TBCCQ15814 346 aa18.25■□□□□ 0.51
TNFRSF1B-204ENST00000536782 RTL4Q6ZR62 310 aa18.25■□□□□ 0.51
TNFRSF1B-204ENST00000536782 CYS1Q717R9 158 aa18.25■□□□□ 0.51
TNFRSF1B-204ENST00000536782 UBE3DQ7Z6J8 389 aa18.25■□□□□ 0.51
TNFRSF1B-204ENST00000536782 SLC22A16Q86VW1 577 aa18.25■□□□□ 0.51
TNFRSF1B-204ENST00000536782 OR5L2Q8NGL0 311 aa18.25■□□□□ 0.51
TNFRSF1B-204ENST00000536782 OR8K3Q8NH51 312 aa18.25■□□□□ 0.51
TNFRSF1B-204ENST00000536782 RND1Q92730 232 aa18.25■□□□□ 0.51
TNFRSF1B-204ENST00000536782 EXT2Q93063 718 aa18.25■□□□□ 0.51
TNFRSF1B-204ENST00000536782 UBXN10Q96LJ8 280 aa18.25■□□□□ 0.51
TNFRSF1B-204ENST00000536782 MAPKAP1Q9BPZ7 522 aa18.25■□□□□ 0.51
TNFRSF1B-204ENST00000536782 TREX2Q9BQ50 279 aaPredicted RBP18.25■□□□□ 0.51
TNFRSF1B-204ENST00000536782 MS4A8Q9BY19 250 aa18.25■□□□□ 0.51
TNFRSF1B-204ENST00000536782 TTTY12Q9BZ98 90 aa18.25■□□□□ 0.51
TNFRSF1B-204ENST00000536782 CD244Q9BZW8 370 aa18.25■□□□□ 0.51
TNFRSF1B-204ENST00000536782 ZDHHC11Q9H8X9 412 aa18.25■□□□□ 0.51
TNFRSF1B-204ENST00000536782 MCCC2Q9HCC0 563 aa18.25■□□□□ 0.51
TNFRSF1B-204ENST00000536782 RNF6Q9Y252 685 aa18.25■□□□□ 0.51
TNFRSF1B-204ENST00000536782 SPACA6W5XKT8 324 aa18.25■□□□□ 0.51
TNFRSF1B-204ENST00000536782 PHF3Q92576 2039 aaKnown RBP18.25■□□□□ 0.51
TNFRSF1B-204ENST00000536782 TCRBV9S1A1TA0A576 114 aa18.24■□□□□ 0.51
TNFRSF1B-204ENST00000536782 FAM166BA8MTA8 275 aa18.24■□□□□ 0.51
TNFRSF1B-204ENST00000536782 FANCGO15287 622 aa18.24■□□□□ 0.51
TNFRSF1B-204ENST00000536782 EPORP19235 508 aa18.24■□□□□ 0.51
TNFRSF1B-204ENST00000536782 CNR1P21554 472 aa18.24■□□□□ 0.51
TNFRSF1B-204ENST00000536782 ATP5A1P25705 553 aaKnown RBP18.24■□□□□ 0.51
TNFRSF1B-204ENST00000536782 NR0B1P51843 470 aaKnown RBP18.24■□□□□ 0.51
TNFRSF1B-204ENST00000536782 RAB10P61026 200 aa18.24■□□□□ 0.51
TNFRSF1B-204ENST00000536782 MRPS25P82663 173 aaKnown RBP18.24■□□□□ 0.51
TNFRSF1B-204ENST00000536782 ZKSCAN8Q15776 578 aaPredicted RBP18.24■□□□□ 0.51
TNFRSF1B-204ENST00000536782 ZNF750Q32MQ0 723 aa18.24■□□□□ 0.51
TNFRSF1B-204ENST00000536782 TMEM35AQ53FP2 167 aa18.24■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 52.7 ms