RNA–Protein interactions for RNA: ENST00000536634.5

CLIP1-207, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

TSL 3

Gene CLIP1, Length 929 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-207ENST00000536634 GFI1BQ5VTD9 330 aa5.05□□□□□ -1.6
CLIP1-207ENST00000536634 IRAK1BP1Q5VVH5 260 aa5.05□□□□□ -1.6
CLIP1-207ENST00000536634 OR6B2Q6IFH4 312 aa5.05□□□□□ -1.6
CLIP1-207ENST00000536634 BRAT1Q6PJG6 821 aa5.05□□□□□ -1.6
CLIP1-207ENST00000536634 GDPD4Q6W3E5 623 aa5.05□□□□□ -1.6
CLIP1-207ENST00000536634 UNC93AQ86WB7 457 aa5.05□□□□□ -1.6
CLIP1-207ENST00000536634 ZFAND4Q86XD8 727 aa5.05□□□□□ -1.6
CLIP1-207ENST00000536634 KMT5CQ86Y97 462 aa5.05□□□□□ -1.6
CLIP1-207ENST00000536634 MFN1Q8IWA4 741 aa5.05□□□□□ -1.6
CLIP1-207ENST00000536634 APCDD1Q8J025 514 aa5.05□□□□□ -1.6
CLIP1-207ENST00000536634 FBXO39Q8N4B4 442 aa5.05□□□□□ -1.6
CLIP1-207ENST00000536634 NAXEQ8NCW5 288 aa5.05□□□□□ -1.6
CLIP1-207ENST00000536634 OR13A1Q8NGR1 328 aa5.05□□□□□ -1.6
CLIP1-207ENST00000536634 OR5R1Q8NH85 324 aa5.05□□□□□ -1.6
CLIP1-207ENST00000536634 FIBINQ8TAL6 211 aa5.05□□□□□ -1.6
CLIP1-207ENST00000536634 NR4A3Q92570 626 aa5.05□□□□□ -1.6
CLIP1-207ENST00000536634 PPM1MQ96MI6 270 aa5.05□□□□□ -1.6
CLIP1-207ENST00000536634 DUSP16Q9BY84 665 aa5.05□□□□□ -1.6
CLIP1-207ENST00000536634 MMP28Q9H239 520 aa5.05□□□□□ -1.6
CLIP1-207ENST00000536634 SYNDIG1Q9H7V2 258 aa5.05□□□□□ -1.6
CLIP1-207ENST00000536634 APOBEC3GQ9HC16 384 aaKnown RBP5.05□□□□□ -1.6
CLIP1-207ENST00000536634 EPB41L5Q9HCM4 733 aa5.05□□□□□ -1.6
CLIP1-207ENST00000536634 ZNF71Q9NQZ8 489 aaPredicted RBP5.05□□□□□ -1.6
CLIP1-207ENST00000536634 ZFP57Q9NU63 452 aa5.05□□□□□ -1.6
CLIP1-207ENST00000536634 PANK4Q9NVE7 773 aa5.05□□□□□ -1.6
CLIP1-207ENST00000536634 PISDQ9UG56 409 aa5.05□□□□□ -1.6
CLIP1-207ENST00000536634 POU2F3Q9UKI9 436 aa5.05□□□□□ -1.6
CLIP1-207ENST00000536634 SHANK1Q9Y566 2161 aa5.05□□□□□ -1.6
CLIP1-207ENST00000536634 MAP1AP78559 2803 aaPredicted RBP5.04□□□□□ -1.6
CLIP1-207ENST00000536634 C1orf226A1L170 272 aa5.04□□□□□ -1.6
CLIP1-207ENST00000536634 NEMP2A6NFY4 417 aa5.04□□□□□ -1.6
CLIP1-207ENST00000536634 YJEFN3A6XGL0 299 aa5.04□□□□□ -1.6
CLIP1-207ENST00000536634 E7ENQ6 273 aa5.04□□□□□ -1.6
CLIP1-207ENST00000536634 SLC7A4O43246 635 aa5.04□□□□□ -1.6
CLIP1-207ENST00000536634 SPINT2O43291 252 aa5.04□□□□□ -1.6
CLIP1-207ENST00000536634 STX6O43752 255 aa5.04□□□□□ -1.6
CLIP1-207ENST00000536634 ASS1P00966 412 aaKnown RBP5.04□□□□□ -1.6
CLIP1-207ENST00000536634 SRPRAP08240 638 aaKnown RBP5.04□□□□□ -1.6
CLIP1-207ENST00000536634 SPARCP09486 303 aa5.04□□□□□ -1.6
CLIP1-207ENST00000536634 NUDT1P36639 197 aa5.04□□□□□ -1.6
CLIP1-207ENST00000536634 RIPPLY3P57055 190 aa5.04□□□□□ -1.6
CLIP1-207ENST00000536634 CCNG2Q16589 344 aa5.04□□□□□ -1.6
CLIP1-207ENST00000536634 DPCR1Q3MIW9 517 aa5.04□□□□□ -1.6
CLIP1-207ENST00000536634 MPP7Q5T2T1 576 aa5.04□□□□□ -1.6
CLIP1-207ENST00000536634 PIP5KL1Q5T9C9 394 aa5.04□□□□□ -1.6
CLIP1-207ENST00000536634 SEL1L3Q68CR1 1132 aa5.04□□□□□ -1.6
CLIP1-207ENST00000536634 TRNP1Q6NT89 227 aa5.04□□□□□ -1.6
CLIP1-207ENST00000536634 CYP20A1Q6UW02 462 aa5.04□□□□□ -1.6
CLIP1-207ENST00000536634 RAD9BQ6WBX8 426 aa5.04□□□□□ -1.6
CLIP1-207ENST00000536634 Q6ZSR6 202 aa5.04□□□□□ -1.6
CLIP1-207ENST00000536634 ASB18Q6ZVZ8 466 aa5.04□□□□□ -1.6
CLIP1-207ENST00000536634 GSTA5Q7RTV2 222 aa5.04□□□□□ -1.6
CLIP1-207ENST00000536634 PTAR1Q7Z6K3 402 aaPredicted RBP5.04□□□□□ -1.6
CLIP1-207ENST00000536634 ABI3BPQ7Z7G0 1075 aa5.04□□□□□ -1.6
CLIP1-207ENST00000536634 PIGZQ86VD9 579 aa5.04□□□□□ -1.6
CLIP1-207ENST00000536634 DCUN1D3Q8IWE4 304 aa5.04□□□□□ -1.6
CLIP1-207ENST00000536634 NELFCDQ8IXH7 590 aa5.04□□□□□ -1.6
CLIP1-207ENST00000536634 CARNMT1Q8N4J0 409 aa5.04□□□□□ -1.6
CLIP1-207ENST00000536634 XXYLT1Q8NBI6 393 aa5.04□□□□□ -1.6
CLIP1-207ENST00000536634 TMEM116Q8NCL8 245 aa5.04□□□□□ -1.6
CLIP1-207ENST00000536634 PIGTQ969N2 578 aa5.04□□□□□ -1.6
CLIP1-207ENST00000536634 BMFQ96LC9 184 aa5.04□□□□□ -1.6
CLIP1-207ENST00000536634 WDFY2Q96P53 400 aa5.04□□□□□ -1.6
CLIP1-207ENST00000536634 CCDC3Q9BQI4 270 aa5.04□□□□□ -1.6
CLIP1-207ENST00000536634 ULBP1Q9BZM6 244 aa5.04□□□□□ -1.6
CLIP1-207ENST00000536634 ADNPQ9H2P0 1102 aa5.04□□□□□ -1.6
CLIP1-207ENST00000536634 TCEAL2Q9H3H9 227 aaPredicted RBP5.04□□□□□ -1.6
CLIP1-207ENST00000536634 ABCF3Q9NUQ8 709 aa5.04□□□□□ -1.6
CLIP1-207ENST00000536634 HBS1LQ9Y450 684 aaKnown RBP5.04□□□□□ -1.6
CLIP1-207ENST00000536634 D6RAR5 112 aa5.03□□□□□ -1.6
CLIP1-207ENST00000536634 RAD51BO15315 384 aa5.03□□□□□ -1.6
CLIP1-207ENST00000536634 EIF3DO15371 548 aaKnown RBP eCLIP5.03□□□□□ -1.6
CLIP1-207ENST00000536634 NVLO15381 856 aaKnown RBP5.03□□□□□ -1.6
CLIP1-207ENST00000536634 AQP9O43315 295 aa5.03□□□□□ -1.6
CLIP1-207ENST00000536634 ACSL4O60488 711 aa5.03□□□□□ -1.6
CLIP1-207ENST00000536634 MLYCDO95822 493 aa5.03□□□□□ -1.6
CLIP1-207ENST00000536634 IGLV3-27P01718 113 aa5.03□□□□□ -1.6
CLIP1-207ENST00000536634 CSF2P04141 144 aa5.03□□□□□ -1.6
CLIP1-207ENST00000536634 CTSLP07711 333 aa5.03□□□□□ -1.6
CLIP1-207ENST00000536634 SP1P08047 785 aa5.03□□□□□ -1.6
CLIP1-207ENST00000536634 KRT7P08729 469 aa5.03□□□□□ -1.6
CLIP1-207ENST00000536634 HNRNPA2B1P22626 353 aaKnown RBP5.03□□□□□ -1.6
CLIP1-207ENST00000536634 AKT2P31751 481 aa5.03□□□□□ -1.6
CLIP1-207ENST00000536634 FASLGP48023 281 aa5.03□□□□□ -1.6
CLIP1-207ENST00000536634 TKTL1P51854 596 aa5.03□□□□□ -1.6
CLIP1-207ENST00000536634 MLLT10P55197 1068 aa5.03□□□□□ -1.6
CLIP1-207ENST00000536634 HNRNPKP61978 463 aaKnown RBP eCLIP5.03□□□□□ -1.6
CLIP1-207ENST00000536634 CDH18Q13634 790 aa5.03□□□□□ -1.6
CLIP1-207ENST00000536634 DECR1Q16698 335 aa5.03□□□□□ -1.6
CLIP1-207ENST00000536634 C1orf220Q5T0J3 134 aa5.03□□□□□ -1.6
CLIP1-207ENST00000536634 DCST1Q5T197 706 aa5.03□□□□□ -1.6
CLIP1-207ENST00000536634 BSPRYQ5W0U4 402 aa5.03□□□□□ -1.6
CLIP1-207ENST00000536634 PM20D1Q6GTS8 502 aa5.03□□□□□ -1.6
CLIP1-207ENST00000536634 MARK2Q7KZI7 788 aaKnown RBP5.03□□□□□ -1.6
CLIP1-207ENST00000536634 HORMAD1Q86X24 394 aa5.03□□□□□ -1.6
CLIP1-207ENST00000536634 TICAM1Q8IUC6 712 aa5.03□□□□□ -1.6
CLIP1-207ENST00000536634 ARHGAP18Q8N392 663 aa5.03□□□□□ -1.6
CLIP1-207ENST00000536634 HJURPQ8NCD3 748 aaPredicted RBP5.03□□□□□ -1.6
CLIP1-207ENST00000536634 LMX1AQ8TE12 382 aa5.03□□□□□ -1.6
CLIP1-207ENST00000536634 SLC38A5Q8WUX1 472 aa5.03□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms