RNA–Protein interactions for RNA: ENST00000534636.5

CTSB-233, Transcript of cathepsin B, humanhuman

TSL 4

Gene CTSB, Length 633 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSB-233ENST00000534636 ANKRD17O75179 2603 aaKnown RBP17.18■□□□□ 0.34
CTSB-233ENST00000534636 TNNI3P19429 210 aa17.17■□□□□ 0.34
CTSB-233ENST00000534636 SERPINB1P30740 379 aa17.17■□□□□ 0.34
CTSB-233ENST00000534636 ZKSCAN8Q15776 578 aaPredicted RBP17.17■□□□□ 0.34
CTSB-233ENST00000534636 TBCCQ15814 346 aa17.17■□□□□ 0.34
CTSB-233ENST00000534636 GRTP1Q5TC63 336 aa17.17■□□□□ 0.34
CTSB-233ENST00000534636 ADNP2Q6IQ32 1131 aa17.17■□□□□ 0.34
CTSB-233ENST00000534636 CYS1Q717R9 158 aa17.17■□□□□ 0.34
CTSB-233ENST00000534636 TBC1D1Q86TI0 1168 aaPredicted RBP17.17■□□□□ 0.34
CTSB-233ENST00000534636 CHERPQ8IWX8 916 aaKnown RBP17.17■□□□□ 0.34
CTSB-233ENST00000534636 C7orf57Q8NEG2 295 aa17.17■□□□□ 0.34
CTSB-233ENST00000534636 C16orf52Q8NHV5 167 aa17.17■□□□□ 0.34
CTSB-233ENST00000534636 STAG3L4Q8TBR4 150 aa17.17■□□□□ 0.34
CTSB-233ENST00000534636 CHTF18Q8WVB6 975 aa17.17■□□□□ 0.34
CTSB-233ENST00000534636 LURAP1Q96LR2 239 aa17.17■□□□□ 0.34
CTSB-233ENST00000534636 F2RL3Q96RI0 385 aa17.17■□□□□ 0.34
CTSB-233ENST00000534636 DMRTA2Q96SC8 542 aa17.17■□□□□ 0.34
CTSB-233ENST00000534636 TBCDQ9BTW9 1192 aa17.17■□□□□ 0.34
CTSB-233ENST00000534636 ALOXE3Q9BYJ1 711 aa17.17■□□□□ 0.34
CTSB-233ENST00000534636 TRIM8Q9BZR9 551 aa17.17■□□□□ 0.34
CTSB-233ENST00000534636 OR8D2Q9GZM6 311 aa17.17■□□□□ 0.34
CTSB-233ENST00000534636 MYOTQ9UBF9 498 aa17.17■□□□□ 0.34
CTSB-233ENST00000534636 COPS7AQ9UBW8 275 aa17.17■□□□□ 0.34
CTSB-233ENST00000534636 VTI1BQ9UEU0 232 aa17.17■□□□□ 0.34
CTSB-233ENST00000534636 PTBP2Q9UKA9 531 aaKnown RBP17.17■□□□□ 0.34
CTSB-233ENST00000534636 ZNF490Q9ULM2 529 aaPredicted RBP17.17■□□□□ 0.34
CTSB-233ENST00000534636 UTP11Q9Y3A2 253 aaKnown RBP17.17■□□□□ 0.34
CTSB-233ENST00000534636 CLDN16Q9Y5I7 305 aa17.17■□□□□ 0.34
CTSB-233ENST00000534636 PDZD2O15018 2839 aa17.17■□□□□ 0.34
CTSB-233ENST00000534636 FAM159BA6NKW6 160 aa17.16■□□□□ 0.34
CTSB-233ENST00000534636 C17orf105B2RV13 164 aa17.16■□□□□ 0.34
CTSB-233ENST00000534636 SUPT3HB4E1H0 165 aa17.16■□□□□ 0.34
CTSB-233ENST00000534636 DYRK3O43781 588 aa17.16■□□□□ 0.34
CTSB-233ENST00000534636 SUPT3HO75486 399 aa17.16■□□□□ 0.34
CTSB-233ENST00000534636 TBX6O95947 436 aaPredicted RBP17.16■□□□□ 0.34
CTSB-233ENST00000534636 PCNAP12004 261 aa17.16■□□□□ 0.34
CTSB-233ENST00000534636 COX7A2P14406 83 aa17.16■□□□□ 0.34
CTSB-233ENST00000534636 STX2P32856 288 aa17.16■□□□□ 0.34
CTSB-233ENST00000534636 SSR2P43308 183 aa17.16■□□□□ 0.34
CTSB-233ENST00000534636 GPR143P51810 404 aa17.16■□□□□ 0.34
CTSB-233ENST00000534636 TMEM35AQ53FP2 167 aa17.16■□□□□ 0.34
CTSB-233ENST00000534636 CMPK2Q5EBM0 449 aa17.16■□□□□ 0.34
CTSB-233ENST00000534636 TMEM211Q6ICI0 200 aa17.16■□□□□ 0.34
CTSB-233ENST00000534636 MED27Q6P2C8 311 aa17.16■□□□□ 0.34
CTSB-233ENST00000534636 IL20RBQ6UXL0 311 aa17.16■□□□□ 0.34
CTSB-233ENST00000534636 CHSY3Q70JA7 882 aa17.16■□□□□ 0.34
CTSB-233ENST00000534636 FGD2Q7Z6J4 655 aa17.16■□□□□ 0.34
CTSB-233ENST00000534636 CENPKQ9BS16 269 aa17.16■□□□□ 0.34
CTSB-233ENST00000534636 CD244Q9BZW8 370 aa17.16■□□□□ 0.34
CTSB-233ENST00000534636 PHACTR1Q9C0D0 580 aa17.16■□□□□ 0.34
CTSB-233ENST00000534636 TP63Q9H3D4 680 aaPredicted RBP17.16■□□□□ 0.34
CTSB-233ENST00000534636 ALG9Q9H6U8 611 aa17.16■□□□□ 0.34
CTSB-233ENST00000534636 LIN28AQ9H9Z2 209 aaKnown RBP17.16■□□□□ 0.34
CTSB-233ENST00000534636 NMRAL1Q9HBL8 299 aa17.16■□□□□ 0.34
CTSB-233ENST00000534636 CELSR1Q9NYQ6 3014 aa17.16■□□□□ 0.34
CTSB-233ENST00000534636 INTS1Q8N201 2190 aaKnown RBP17.16■□□□□ 0.34
CTSB-233ENST00000534636 C19orf84I3L1E1 186 aa17.15■□□□□ 0.34
CTSB-233ENST00000534636 WWP2O00308 870 aa17.15■□□□□ 0.34
CTSB-233ENST00000534636 RAD51CO43502 376 aa17.15■□□□□ 0.34
CTSB-233ENST00000534636 PRKNO60260 465 aaPredicted RBP17.15■□□□□ 0.34
CTSB-233ENST00000534636 PRAMEF4O60810 478 aa17.15■□□□□ 0.34
CTSB-233ENST00000534636 CD22P20273 847 aa17.15■□□□□ 0.34
CTSB-233ENST00000534636 SOX3P41225 446 aa17.15■□□□□ 0.34
CTSB-233ENST00000534636 CAV1Q03135 178 aa17.15■□□□□ 0.34
CTSB-233ENST00000534636 CDSNQ15517 529 aa17.15■□□□□ 0.34
CTSB-233ENST00000534636 AP5B1Q2VPB7 878 aa17.15■□□□□ 0.34
CTSB-233ENST00000534636 PRAMEF9Q5VWM5 478 aa17.15■□□□□ 0.34
CTSB-233ENST00000534636 RGS9BPQ6ZS82 235 aa17.15■□□□□ 0.34
CTSB-233ENST00000534636 GK5Q6ZS86 529 aa17.15■□□□□ 0.34
CTSB-233ENST00000534636 SLC22A16Q86VW1 577 aa17.15■□□□□ 0.34
CTSB-233ENST00000534636 CCDC25Q86WR0 208 aa17.15■□□□□ 0.34
CTSB-233ENST00000534636 PPM1NQ8N819 430 aa17.15■□□□□ 0.34
CTSB-233ENST00000534636 SPATA4Q8NEY3 305 aa17.15■□□□□ 0.34
CTSB-233ENST00000534636 OR5L2Q8NGL0 311 aa17.15■□□□□ 0.34
CTSB-233ENST00000534636 SLC2A12Q8TD20 617 aa17.15■□□□□ 0.34
CTSB-233ENST00000534636 UBXN10Q96LJ8 280 aa17.15■□□□□ 0.34
CTSB-233ENST00000534636 RASL10BQ96S79 203 aa17.15■□□□□ 0.34
CTSB-233ENST00000534636 MS4A8Q9BY19 250 aa17.15■□□□□ 0.34
CTSB-233ENST00000534636 RAB17Q9H0T7 212 aa17.15■□□□□ 0.34
CTSB-233ENST00000534636 PRDM7Q9NQW5 492 aa17.15■□□□□ 0.34
CTSB-233ENST00000534636 OPTCQ9UBM4 332 aa17.15■□□□□ 0.34
CTSB-233ENST00000534636 EML6Q6ZMW3 1958 aa17.15■□□□□ 0.34
CTSB-233ENST00000534636 PHF3Q92576 2039 aaKnown RBP17.14■□□□□ 0.34
CTSB-233ENST00000534636 F8P00451 2351 aa17.14■□□□□ 0.33
CTSB-233ENST00000534636 MYOCOSA0A1B0GUC4 107 aa17.14■□□□□ 0.33
CTSB-233ENST00000534636 SYCE1LA8MT33 242 aa17.14■□□□□ 0.33
CTSB-233ENST00000534636 ADAM10O14672 748 aa17.14■□□□□ 0.33
CTSB-233ENST00000534636 KERAO60938 352 aa17.14■□□□□ 0.33
CTSB-233ENST00000534636 LDB3O75112 727 aa17.14■□□□□ 0.33
CTSB-233ENST00000534636 PDE9AO76083 593 aa17.14■□□□□ 0.33
CTSB-233ENST00000534636 OR6B1O95007 311 aa17.14■□□□□ 0.33
CTSB-233ENST00000534636 HIST1H1TP22492 207 aaPredicted RBP17.14■□□□□ 0.33
CTSB-233ENST00000534636 CPN2P22792 545 aa17.14■□□□□ 0.33
CTSB-233ENST00000534636 ATP5A1P25705 553 aaKnown RBP17.14■□□□□ 0.33
CTSB-233ENST00000534636 CRABP2P29373 138 aa17.14■□□□□ 0.33
CTSB-233ENST00000534636 RAP1GDS1P52306 607 aa17.14■□□□□ 0.33
CTSB-233ENST00000534636 PLTPP55058 493 aa17.14■□□□□ 0.33
CTSB-233ENST00000534636 PPIAP62937 165 aaKnown RBP17.14■□□□□ 0.33
CTSB-233ENST00000534636 C2orf54Q08AI8 447 aa17.14■□□□□ 0.33
CTSB-233ENST00000534636 NAB1Q13506 487 aa17.14■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms