RNA–Protein interactions for RNA: ENST00000532800.1

RPUSD4-207, Transcript of RNA pseudouridylate synthase domain containing 4, humanhuman

TSL 2

Gene RPUSD4, Length 1,030 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPUSD4-207ENST00000532800 UBE3DQ7Z6J8 389 aa15.85■□□□□ 0.13
RPUSD4-207ENST00000532800 CDH24Q86UP0 819 aa15.85■□□□□ 0.13
RPUSD4-207ENST00000532800 GPALPP1Q8IXQ4 340 aa15.85■□□□□ 0.13
RPUSD4-207ENST00000532800 TCAIMQ8N3R3 496 aa15.85■□□□□ 0.13
RPUSD4-207ENST00000532800 TMEM132CQ8N3T6 1108 aa15.85■□□□□ 0.13
RPUSD4-207ENST00000532800 PTPMT1Q8WUK0 201 aaPredicted RBP15.85■□□□□ 0.13
RPUSD4-207ENST00000532800 EXT2Q93063 718 aa15.85■□□□□ 0.13
RPUSD4-207ENST00000532800 PTCD3Q96EY7 689 aaKnown RBP15.85■□□□□ 0.13
RPUSD4-207ENST00000532800 CAPS2Q9BXY5 557 aa15.85■□□□□ 0.13
RPUSD4-207ENST00000532800 ALOXE3Q9BYJ1 711 aa15.85■□□□□ 0.13
RPUSD4-207ENST00000532800 UCK2Q9BZX2 261 aa15.85■□□□□ 0.13
RPUSD4-207ENST00000532800 OR8D2Q9GZM6 311 aa15.85■□□□□ 0.13
RPUSD4-207ENST00000532800 PITHD1Q9GZP4 211 aaPredicted RBP15.85■□□□□ 0.13
RPUSD4-207ENST00000532800 TP63Q9H3D4 680 aaPredicted RBP15.85■□□□□ 0.13
RPUSD4-207ENST00000532800 MCCC2Q9HCC0 563 aa15.85■□□□□ 0.13
RPUSD4-207ENST00000532800 LIPGQ9Y5X9 500 aa15.85■□□□□ 0.13
RPUSD4-207ENST00000532800 CLCA3PQ9Y6N3 262 aa15.85■□□□□ 0.13
RPUSD4-207ENST00000532800 C2CD3Q4AC94 2353 aa15.85■□□□□ 0.13
RPUSD4-207ENST00000532800 RTCAO00442 366 aaKnown RBP15.84■□□□□ 0.13
RPUSD4-207ENST00000532800 CTNSO60931 367 aa15.84■□□□□ 0.13
RPUSD4-207ENST00000532800 STK16O75716 305 aa15.84■□□□□ 0.13
RPUSD4-207ENST00000532800 IGFBP2P18065 325 aa15.84■□□□□ 0.13
RPUSD4-207ENST00000532800 CHRNB4P30926 498 aa15.84■□□□□ 0.13
RPUSD4-207ENST00000532800 TFF3Q07654 80 aa15.84■□□□□ 0.13
RPUSD4-207ENST00000532800 PDK4Q16654 411 aa15.84■□□□□ 0.13
RPUSD4-207ENST00000532800 ZNF750Q32MQ0 723 aa15.84■□□□□ 0.13
RPUSD4-207ENST00000532800 TMEM211Q6ICI0 200 aa15.84■□□□□ 0.13
RPUSD4-207ENST00000532800 SULT1C3Q6IMI6 304 aa15.84■□□□□ 0.13
RPUSD4-207ENST00000532800 CCDC71Q8IV32 467 aaPredicted RBP15.84■□□□□ 0.13
RPUSD4-207ENST00000532800 PDPRQ8NCN5 879 aa15.84■□□□□ 0.13
RPUSD4-207ENST00000532800 DAZLQ92904 295 aaKnown RBP15.84■□□□□ 0.13
RPUSD4-207ENST00000532800 WDR34Q96EX3 536 aa15.84■□□□□ 0.13
RPUSD4-207ENST00000532800 KRT12Q99456 494 aa15.84■□□□□ 0.13
RPUSD4-207ENST00000532800 MAPKAP1Q9BPZ7 522 aa15.84■□□□□ 0.13
RPUSD4-207ENST00000532800 TTTY12Q9BZ98 90 aa15.84■□□□□ 0.13
RPUSD4-207ENST00000532800 ZDHHC11Q9H8X9 412 aa15.84■□□□□ 0.13
RPUSD4-207ENST00000532800 CNOT10Q9H9A5 744 aaKnown RBP15.84■□□□□ 0.13
RPUSD4-207ENST00000532800 CD274Q9NZQ7 290 aa15.84■□□□□ 0.13
RPUSD4-207ENST00000532800 VTI1BQ9UEU0 232 aa15.84■□□□□ 0.13
RPUSD4-207ENST00000532800 NPIPA2E9PIF3 369 aa15.83■□□□□ 0.12
RPUSD4-207ENST00000532800 NPIPA3F8WFD2 350 aa15.83■□□□□ 0.12
RPUSD4-207ENST00000532800 CCNT2O60583 730 aaKnown RBP15.83■□□□□ 0.12
RPUSD4-207ENST00000532800 SH3BGRLO75368 114 aa15.83■□□□□ 0.12
RPUSD4-207ENST00000532800 CAPN3P20807 821 aa15.83■□□□□ 0.12
RPUSD4-207ENST00000532800 HPDP32754 393 aaPredicted RBP15.83■□□□□ 0.12
RPUSD4-207ENST00000532800 MSH2P43246 934 aa15.83■□□□□ 0.12
RPUSD4-207ENST00000532800 KCNC1P48547 511 aa15.83■□□□□ 0.12
RPUSD4-207ENST00000532800 NUP107P57740 925 aa15.83■□□□□ 0.12
RPUSD4-207ENST00000532800 GNG11P61952 73 aa15.83■□□□□ 0.12
RPUSD4-207ENST00000532800 STX4Q12846 297 aa15.83■□□□□ 0.12
RPUSD4-207ENST00000532800 CHIT1Q13231 466 aa15.83■□□□□ 0.12
RPUSD4-207ENST00000532800 EFTUD2Q15029 972 aaKnown RBP eCLIP15.83■□□□□ 0.12
RPUSD4-207ENST00000532800 TESK1Q15569 626 aa15.83■□□□□ 0.12
RPUSD4-207ENST00000532800 MORN4Q8NDC4 146 aa15.83■□□□□ 0.12
RPUSD4-207ENST00000532800 OR5M9Q8NGP3 310 aa15.83■□□□□ 0.12
RPUSD4-207ENST00000532800 OR14A16Q8NHC5 309 aa15.83■□□□□ 0.12
RPUSD4-207ENST00000532800 SLC2A12Q8TD20 617 aa15.83■□□□□ 0.12
RPUSD4-207ENST00000532800 PYROXD1Q8WU10 500 aa15.83■□□□□ 0.12
RPUSD4-207ENST00000532800 ASB5Q8WWX0 329 aa15.83■□□□□ 0.12
RPUSD4-207ENST00000532800 RND1Q92730 232 aa15.83■□□□□ 0.12
RPUSD4-207ENST00000532800 TSPAN17Q96FV3 270 aa15.83■□□□□ 0.12
RPUSD4-207ENST00000532800 SCYL1Q96KG9 808 aa15.83■□□□□ 0.12
RPUSD4-207ENST00000532800 KCNC2Q96PR1 638 aa15.83■□□□□ 0.12
RPUSD4-207ENST00000532800 GPR22Q99680 433 aa15.83■□□□□ 0.12
RPUSD4-207ENST00000532800 RBBP8Q99708 897 aa15.83■□□□□ 0.12
RPUSD4-207ENST00000532800 EFCAB11Q9BUY7 163 aa15.83■□□□□ 0.12
RPUSD4-207ENST00000532800 MS4A8Q9BY19 250 aa15.83■□□□□ 0.12
RPUSD4-207ENST00000532800 LYRM4Q9HD34 91 aa15.83■□□□□ 0.12
RPUSD4-207ENST00000532800 PNPLA3Q9NST1 481 aa15.83■□□□□ 0.12
RPUSD4-207ENST00000532800 PTBP2Q9UKA9 531 aaKnown RBP15.83■□□□□ 0.12
RPUSD4-207ENST00000532800 SAR1BQ9Y6B6 198 aa15.83■□□□□ 0.12
RPUSD4-207ENST00000532800 MED13LQ71F56 2210 aa15.83■□□□□ 0.12
RPUSD4-207ENST00000532800 C17orf105B2RV13 164 aa15.82■□□□□ 0.12
RPUSD4-207ENST00000532800 CCDC188H7C350 402 aa15.82■□□□□ 0.12
RPUSD4-207ENST00000532800 ACOT7O00154 380 aa15.82■□□□□ 0.12
RPUSD4-207ENST00000532800 TOXO94900 526 aa15.82■□□□□ 0.12
RPUSD4-207ENST00000532800 GLSO94925 669 aaPredicted RBP15.82■□□□□ 0.12
RPUSD4-207ENST00000532800 ETHE1O95571 254 aa15.82■□□□□ 0.12
RPUSD4-207ENST00000532800 TNNI3P19429 210 aa15.82■□□□□ 0.12
RPUSD4-207ENST00000532800 ATP5A1P25705 553 aaKnown RBP15.82■□□□□ 0.12
RPUSD4-207ENST00000532800 RNF4P78317 190 aa15.82■□□□□ 0.12
RPUSD4-207ENST00000532800 IRF8Q02556 426 aa15.82■□□□□ 0.12
RPUSD4-207ENST00000532800 TGM3Q08188 693 aa15.82■□□□□ 0.12
RPUSD4-207ENST00000532800 PMPCAQ10713 525 aa15.82■□□□□ 0.12
RPUSD4-207ENST00000532800 CBLBQ13191 982 aa15.82■□□□□ 0.12
RPUSD4-207ENST00000532800 RCN2Q14257 317 aa15.82■□□□□ 0.12
RPUSD4-207ENST00000532800 CDKL4Q5MAI5 379 aa15.82■□□□□ 0.12
RPUSD4-207ENST00000532800 RTL4Q6ZR62 310 aa15.82■□□□□ 0.12
RPUSD4-207ENST00000532800 TMEM251Q8N6I4 163 aa15.82■□□□□ 0.12
RPUSD4-207ENST00000532800 OR5M3Q8NGP4 307 aa15.82■□□□□ 0.12
RPUSD4-207ENST00000532800 LILRB4Q8NHJ6 448 aa15.82■□□□□ 0.12
RPUSD4-207ENST00000532800 ZNF473Q8WTR7 871 aaKnown RBP15.82■□□□□ 0.12
RPUSD4-207ENST00000532800 ANKRD9Q96BM1 317 aaPredicted RBP15.82■□□□□ 0.12
RPUSD4-207ENST00000532800 NAPGQ99747 312 aaPredicted RBP15.82■□□□□ 0.12
RPUSD4-207ENST00000532800 DPH5Q9H2P9 285 aa15.82■□□□□ 0.12
RPUSD4-207ENST00000532800 SAYSD1Q9NPB0 183 aa15.82■□□□□ 0.12
RPUSD4-207ENST00000532800 TNFRSF10DQ9UBN6 386 aa15.82■□□□□ 0.12
RPUSD4-207ENST00000532800 RNF112Q9ULX5 631 aa15.82■□□□□ 0.12
RPUSD4-207ENST00000532800 TCRBV9S1A1TA0A576 114 aa15.81■□□□□ 0.12
RPUSD4-207ENST00000532800 SYNDIG1LA6NDD5 238 aa15.81■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms