RNA–Protein interactions for RNA: ENST00000532331.5

PTPRK-221, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPRK, Length 5,757 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-221ENST00000532331 AK4P27144 223 aaPredicted RBP10.84□□□□□ -0.67
PTPRK-221ENST00000532331 ST3GAL3Q11203 375 aa10.84□□□□□ -0.67
PTPRK-221ENST00000532331 E2F2Q14209 437 aa10.84□□□□□ -0.67
PTPRK-221ENST00000532331 SF3B4Q15427 424 aaKnown RBP eCLIP10.84□□□□□ -0.67
PTPRK-221ENST00000532331 CLEC12AQ5QGZ9 265 aa10.84□□□□□ -0.67
PTPRK-221ENST00000532331 OR52E8Q6IFG1 317 aa10.84□□□□□ -0.67
PTPRK-221ENST00000532331 PPP1R3BQ86XI6 285 aa10.84□□□□□ -0.67
PTPRK-221ENST00000532331 C9orf43Q8TAL5 461 aaPredicted RBP10.84□□□□□ -0.67
PTPRK-221ENST00000532331 RPF2Q9H7B2 306 aaKnown RBP10.84□□□□□ -0.67
PTPRK-221ENST00000532331 IFT46Q9NQC8 304 aa10.84□□□□□ -0.67
PTPRK-221ENST00000532331 MARK1Q9P0L2 795 aa10.84□□□□□ -0.67
PTPRK-221ENST00000532331 KIAA0100Q14667 2235 aaKnown RBP10.84□□□□□ -0.67
PTPRK-221ENST00000532331 M0QX08 132 aa10.84□□□□□ -0.67
PTPRK-221ENST00000532331 CACNG3O60359 315 aa10.84□□□□□ -0.67
PTPRK-221ENST00000532331 XRCC1P18887 633 aaPredicted RBP10.84□□□□□ -0.67
PTPRK-221ENST00000532331 FLYWCH1Q4VC44 716 aa10.84□□□□□ -0.67
PTPRK-221ENST00000532331 SWT1Q5T5J6 900 aaKnown RBP10.84□□□□□ -0.67
PTPRK-221ENST00000532331 DCAF12Q5T6F0 453 aa10.84□□□□□ -0.67
PTPRK-221ENST00000532331 RNF220Q5VTB9 566 aa10.84□□□□□ -0.67
PTPRK-221ENST00000532331 RASSF6Q6ZTQ3 369 aa10.84□□□□□ -0.67
PTPRK-221ENST00000532331 AKAP14Q86UN6 197 aa10.84□□□□□ -0.67
PTPRK-221ENST00000532331 TRIM73Q86UV7 250 aa10.84□□□□□ -0.67
PTPRK-221ENST00000532331 SDR16C5Q8N3Y7 309 aa10.84□□□□□ -0.67
PTPRK-221ENST00000532331 LRCH3Q96II8 777 aa10.84□□□□□ -0.67
PTPRK-221ENST00000532331 EBF2Q9HAK2 575 aa10.84□□□□□ -0.67
PTPRK-221ENST00000532331 A0A075B6Q4 140 aa10.83□□□□□ -0.68
PTPRK-221ENST00000532331 OR52A4PA6NMU1 304 aa10.83□□□□□ -0.68
PTPRK-221ENST00000532331 HCRTR2O43614 444 aa10.83□□□□□ -0.68
PTPRK-221ENST00000532331 GATBO75879 557 aaKnown RBP10.83□□□□□ -0.68
PTPRK-221ENST00000532331 H6PDO95479 791 aa10.83□□□□□ -0.68
PTPRK-221ENST00000532331 C6orf47O95873 294 aa10.83□□□□□ -0.68
PTPRK-221ENST00000532331 AOC1P19801 751 aa10.83□□□□□ -0.68
PTPRK-221ENST00000532331 NR4A1P22736 598 aa10.83□□□□□ -0.68
PTPRK-221ENST00000532331 FMO3P31513 532 aa10.83□□□□□ -0.68
PTPRK-221ENST00000532331 RORAP35398 523 aa10.83□□□□□ -0.68
PTPRK-221ENST00000532331 SLC6A9P48067 706 aa10.83□□□□□ -0.68
PTPRK-221ENST00000532331 CBX3Q13185 183 aa10.83□□□□□ -0.68
PTPRK-221ENST00000532331 BTBD16Q32M84 506 aa10.83□□□□□ -0.68
PTPRK-221ENST00000532331 RAB6CQ53S08 254 aa10.83□□□□□ -0.68
PTPRK-221ENST00000532331 RBM48Q5RL73 367 aaKnown RBP10.83□□□□□ -0.68
PTPRK-221ENST00000532331 RAET1LQ5VY80 246 aa10.83□□□□□ -0.68
PTPRK-221ENST00000532331 IGDCC3Q8IVU1 814 aa10.83□□□□□ -0.68
PTPRK-221ENST00000532331 PROKR2Q8NFJ6 384 aa10.83□□□□□ -0.68
PTPRK-221ENST00000532331 CHFRQ96EP1 664 aa10.83□□□□□ -0.68
PTPRK-221ENST00000532331 BHLHE41Q9C0J9 482 aaPredicted RBP10.83□□□□□ -0.68
PTPRK-221ENST00000532331 RAB6CQ9H0N0 254 aa10.83□□□□□ -0.68
PTPRK-221ENST00000532331 REEP4Q9H6H4 257 aa10.83□□□□□ -0.68
PTPRK-221ENST00000532331 THAP10Q9P2Z0 257 aaPredicted RBP10.83□□□□□ -0.68
PTPRK-221ENST00000532331 CA5BQ9Y2D0 317 aa10.83□□□□□ -0.68
PTPRK-221ENST00000532331 EFCAB7A8K855 629 aa10.83□□□□□ -0.68
PTPRK-221ENST00000532331 BHMG1C9JSJ3 638 aaPredicted RBP10.83□□□□□ -0.68
PTPRK-221ENST00000532331 IL1RNP18510 177 aa10.83□□□□□ -0.68
PTPRK-221ENST00000532331 GABRA3P34903 492 aa10.83□□□□□ -0.68
PTPRK-221ENST00000532331 MC1RQ01726 317 aa10.83□□□□□ -0.68
PTPRK-221ENST00000532331 SPATS1Q496A3 300 aa10.83□□□□□ -0.68
PTPRK-221ENST00000532331 TMEM31Q5JXX7 168 aa10.83□□□□□ -0.68
PTPRK-221ENST00000532331 NOXRED1Q6NXP6 359 aa10.83□□□□□ -0.68
PTPRK-221ENST00000532331 QSOX2Q6ZRP7 698 aa10.83□□□□□ -0.68
PTPRK-221ENST00000532331 USP43Q70EL4 1123 aa10.83□□□□□ -0.68
PTPRK-221ENST00000532331 NR4A3Q92570 626 aa10.83□□□□□ -0.68
PTPRK-221ENST00000532331 HTRA1Q92743 480 aa10.83□□□□□ -0.68
PTPRK-221ENST00000532331 COQ8BQ96D53 544 aa10.83□□□□□ -0.68
PTPRK-221ENST00000532331 PYURFQ96I23 114 aa10.83□□□□□ -0.68
PTPRK-221ENST00000532331 CNDP2Q96KP4 475 aaKnown RBP10.83□□□□□ -0.68
PTPRK-221ENST00000532331 SLC39A3Q9BRY0 314 aa10.83□□□□□ -0.68
PTPRK-221ENST00000532331 ACTR3BQ9P1U1 418 aa10.83□□□□□ -0.68
PTPRK-221ENST00000532331 CPNE7Q9UBL6 633 aa10.83□□□□□ -0.68
PTPRK-221ENST00000532331 PSAT1Q9Y617 370 aa10.83□□□□□ -0.68
PTPRK-221ENST00000532331 ZNF20P17024 532 aa10.83□□□□□ -0.68
PTPRK-221ENST00000532331 AGTR2P50052 363 aa10.83□□□□□ -0.68
PTPRK-221ENST00000532331 SMSP52788 366 aa10.83□□□□□ -0.68
PTPRK-221ENST00000532331 EMP2P54851 167 aa10.83□□□□□ -0.68
PTPRK-221ENST00000532331 CTBSQ01459 385 aa10.83□□□□□ -0.68
PTPRK-221ENST00000532331 KIR2DS3Q14952 304 aa10.83□□□□□ -0.68
PTPRK-221ENST00000532331 TNFAIP8L3Q5GJ75 292 aa10.83□□□□□ -0.68
PTPRK-221ENST00000532331 SPANXN4Q5MJ08 99 aa10.83□□□□□ -0.68
PTPRK-221ENST00000532331 SYVN1Q86TM6 617 aa10.83□□□□□ -0.68
PTPRK-221ENST00000532331 LRRC25Q8N386 305 aaPredicted RBP10.83□□□□□ -0.68
PTPRK-221ENST00000532331 RAB2BQ8WUD1 216 aa10.83□□□□□ -0.68
PTPRK-221ENST00000532331 TMBIM1Q969X1 311 aa10.83□□□□□ -0.68
PTPRK-221ENST00000532331 KCNA7Q96RP8 456 aa10.83□□□□□ -0.68
PTPRK-221ENST00000532331 TBX5Q99593 518 aa10.83□□□□□ -0.68
PTPRK-221ENST00000532331 ZNF395Q9H8N7 513 aaPredicted RBP10.83□□□□□ -0.68
PTPRK-221ENST00000532331 TAAR2Q9P1P5 351 aa10.83□□□□□ -0.68
PTPRK-221ENST00000532331 MYOCOSA0A1B0GUC4 107 aa10.83□□□□□ -0.68
PTPRK-221ENST00000532331 CIB4A0PJX0 185 aa10.83□□□□□ -0.68
PTPRK-221ENST00000532331 WRBO00258 174 aa10.83□□□□□ -0.68
PTPRK-221ENST00000532331 IGHEP01854 428 aa10.83□□□□□ -0.68
PTPRK-221ENST00000532331 DBIP07108 87 aaKnown RBP10.83□□□□□ -0.68
PTPRK-221ENST00000532331 MAGP20916 626 aa10.83□□□□□ -0.68
PTPRK-221ENST00000532331 EIF2DP41214 584 aaKnown RBP10.83□□□□□ -0.68
PTPRK-221ENST00000532331 AKIRIN2Q53H80 203 aa10.83□□□□□ -0.68
PTPRK-221ENST00000532331 MANEALQ5VSG8 457 aa10.83□□□□□ -0.68
PTPRK-221ENST00000532331 PAMR1Q6UXH9 720 aa10.83□□□□□ -0.68
PTPRK-221ENST00000532331 GHDCQ8N2G8 530 aa10.83□□□□□ -0.68
PTPRK-221ENST00000532331 CLIP4Q8N3C7 705 aa10.83□□□□□ -0.68
PTPRK-221ENST00000532331 DIO2Q92813 273 aa10.83□□□□□ -0.68
PTPRK-221ENST00000532331 F2RL3Q96RI0 385 aa10.83□□□□□ -0.68
PTPRK-221ENST00000532331 ZNF382Q96SR6 550 aa10.83□□□□□ -0.68
PTPRK-221ENST00000532331 C14orf105Q9NVL8 296 aa10.83□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms