RNA–Protein interactions for RNA: ENST00000531430.5

NEDD8-206, Transcript of neural precursor cell expressed, developmentally down-regulated 8, humanhuman

TSL 2

Gene NEDD8, Length 651 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-206ENST00000531430 CCL3P10147 92 aa8.54□□□□□ -1.04
NEDD8-206ENST00000531430 PEX19P40855 299 aa8.54□□□□□ -1.04
NEDD8-206ENST00000531430 ZNF75DP51815 510 aa8.54□□□□□ -1.04
NEDD8-206ENST00000531430 HK2P52789 917 aa8.54□□□□□ -1.04
NEDD8-206ENST00000531430 CDKN2DP55273 166 aa8.54□□□□□ -1.04
NEDD8-206ENST00000531430 HSD17B7P56937 341 aa8.54□□□□□ -1.04
NEDD8-206ENST00000531430 ID2Q02363 134 aa8.54□□□□□ -1.04
NEDD8-206ENST00000531430 ASPHQ12797 758 aa8.54□□□□□ -1.04
NEDD8-206ENST00000531430 SP140Q13342 867 aa8.54□□□□□ -1.04
NEDD8-206ENST00000531430 PCBP2Q15366 365 aaKnown RBP eCLIP8.54□□□□□ -1.049e-10■□□□□ 8.1
NEDD8-206ENST00000531430 TOMM20Q15388 145 aa8.54□□□□□ -1.04
NEDD8-206ENST00000531430 SIX1Q15475 284 aaPredicted RBP8.54□□□□□ -1.04
NEDD8-206ENST00000531430 RBM20Q5T481 1227 aaKnown RBP8.54□□□□□ -1.04
NEDD8-206ENST00000531430 PRAMEF20Q5VT98 475 aa8.54□□□□□ -1.04
NEDD8-206ENST00000531430 SLC22A10Q63ZE4 541 aa8.54□□□□□ -1.04
NEDD8-206ENST00000531430 PAMR1Q6UXH9 720 aa8.54□□□□□ -1.04
NEDD8-206ENST00000531430 P3H2Q8IVL5 708 aa8.54□□□□□ -1.04
NEDD8-206ENST00000531430 RNF10Q8N5U6 811 aaKnown RBP8.54□□□□□ -1.04
NEDD8-206ENST00000531430 GPATCH11Q8N954 259 aa8.54□□□□□ -1.04
NEDD8-206ENST00000531430 TMEM52Q8NDY8 209 aa8.54□□□□□ -1.04
NEDD8-206ENST00000531430 TNIP2Q8NFZ5 429 aa8.54□□□□□ -1.04
NEDD8-206ENST00000531430 DOK4Q8TEW6 326 aa8.54□□□□□ -1.04
NEDD8-206ENST00000531430 MAIP1Q8WWC4 291 aa8.54□□□□□ -1.04
NEDD8-206ENST00000531430 DAZLQ92904 295 aaKnown RBP8.54□□□□□ -1.04
NEDD8-206ENST00000531430 MBD6Q96DN6 1003 aa8.54□□□□□ -1.04
NEDD8-206ENST00000531430 SMIM10Q96HG1 83 aa8.54□□□□□ -1.04
NEDD8-206ENST00000531430 MDFIQ99750 246 aa8.54□□□□□ -1.04
NEDD8-206ENST00000531430 EGFL8Q99944 293 aa8.54□□□□□ -1.04
NEDD8-206ENST00000531430 FAM167BQ9BTA0 163 aa8.54□□□□□ -1.04
NEDD8-206ENST00000531430 SLC6A15Q9H2J7 730 aa8.54□□□□□ -1.04
NEDD8-206ENST00000531430 COPS7BQ9H9Q2 264 aaPredicted RBP8.54□□□□□ -1.04
NEDD8-206ENST00000531430 ADAP2Q9NPF8 381 aa8.54□□□□□ -1.04
NEDD8-206ENST00000531430 SPRR3Q9UBC9 169 aa8.54□□□□□ -1.04
NEDD8-206ENST00000531430 MTRF1LQ9UGC7 380 aaKnown RBP8.54□□□□□ -1.04
NEDD8-206ENST00000531430 KCNE2Q9Y6J6 123 aa8.54□□□□□ -1.04
NEDD8-206ENST00000531430 DNHD1Q96M86 4753 aa8.54□□□□□ -1.04
NEDD8-206ENST00000531430 A0A088AWK7 358 aa8.53□□□□□ -1.04
NEDD8-206ENST00000531430 ANKDD1BA6NHY2 528 aa8.53□□□□□ -1.04
NEDD8-206ENST00000531430 KIAA1324LA8MWY0 1029 aaPredicted RBP8.53□□□□□ -1.04
NEDD8-206ENST00000531430 C17orf105B2RV13 164 aa8.53□□□□□ -1.04
NEDD8-206ENST00000531430 C4orf51C9J302 202 aa8.53□□□□□ -1.04
NEDD8-206ENST00000531430 CASKO14936 926 aa8.53□□□□□ -1.04
NEDD8-206ENST00000531430 CLGNO14967 610 aa8.53□□□□□ -1.04
NEDD8-206ENST00000531430 HCN1O60741 890 aa8.53□□□□□ -1.04
NEDD8-206ENST00000531430 ZNF354AO60765 605 aaPredicted RBP8.53□□□□□ -1.04
NEDD8-206ENST00000531430 CTNSO60931 367 aa8.53□□□□□ -1.04
NEDD8-206ENST00000531430 LDB3O75112 727 aa8.53□□□□□ -1.04
NEDD8-206ENST00000531430 LRATO95237 230 aa8.53□□□□□ -1.04
NEDD8-206ENST00000531430 IL2RAP01589 272 aa8.53□□□□□ -1.04
NEDD8-206ENST00000531430 RFPL3SP0C7P2 107 aa8.53□□□□□ -1.04
NEDD8-206ENST00000531430 EPXP11678 715 aa8.53□□□□□ -1.04
NEDD8-206ENST00000531430 ZNF10P21506 573 aaPredicted RBP8.53□□□□□ -1.04
NEDD8-206ENST00000531430 CXCR5P32302 372 aa8.53□□□□□ -1.04
NEDD8-206ENST00000531430 ASCL1P50553 236 aa8.53□□□□□ -1.04
NEDD8-206ENST00000531430 RAB38P57729 211 aa8.53□□□□□ -1.04
NEDD8-206ENST00000531430 RNF4P78317 190 aa8.53□□□□□ -1.04
NEDD8-206ENST00000531430 REEP5Q00765 189 aa8.53□□□□□ -1.04
NEDD8-206ENST00000531430 TIAL1Q01085 375 aaKnown RBP eCLIP8.53□□□□□ -1.04
NEDD8-206ENST00000531430 TERF2Q15554 542 aa8.53□□□□□ -1.04
NEDD8-206ENST00000531430 ELAVL1Q15717 326 aaKnown RBP8.53□□□□□ -1.04
NEDD8-206ENST00000531430 DRICH1Q6PGQ1 229 aaPredicted RBP8.53□□□□□ -1.04
NEDD8-206ENST00000531430 STRA8Q7Z7C7 330 aa8.53□□□□□ -1.04
NEDD8-206ENST00000531430 KIF18BQ86Y91 864 aa8.53□□□□□ -1.04
NEDD8-206ENST00000531430 LMNTD2Q8IXW0 634 aa8.53□□□□□ -1.04
NEDD8-206ENST00000531430 ZNF595Q8IYB9 648 aa8.53□□□□□ -1.04
NEDD8-206ENST00000531430 KLHDC8AQ8IYD2 350 aa8.53□□□□□ -1.04
NEDD8-206ENST00000531430 ULK2Q8IYT8 1036 aa8.53□□□□□ -1.04
NEDD8-206ENST00000531430 RELL2Q8NC24 303 aaPredicted RBP8.53□□□□□ -1.04
NEDD8-206ENST00000531430 MORN4Q8NDC4 146 aa8.53□□□□□ -1.04
NEDD8-206ENST00000531430 FAM13CQ8NE31 585 aa8.53□□□□□ -1.04
NEDD8-206ENST00000531430 GABPB2Q8TAK5 448 aaPredicted RBP8.53□□□□□ -1.04
NEDD8-206ENST00000531430 FBXL8Q96CD0 374 aa8.53□□□□□ -1.04
NEDD8-206ENST00000531430 SGCZQ96LD1 299 aa8.53□□□□□ -1.04
NEDD8-206ENST00000531430 SARGQ9BW04 601 aa8.53□□□□□ -1.04
NEDD8-206ENST00000531430 PELI2Q9HAT8 420 aa8.53□□□□□ -1.04
NEDD8-206ENST00000531430 XAB2Q9HCS7 855 aaKnown RBP8.53□□□□□ -1.04
NEDD8-206ENST00000531430 CAMK2AQ9UQM7 478 aa8.53□□□□□ -1.04
NEDD8-206ENST00000531430 ATG4BQ9Y4P1 393 aa8.53□□□□□ -1.04
NEDD8-206ENST00000531430 ZNF469Q96JG9 3925 aaPredicted RBP8.53□□□□□ -1.04
NEDD8-206ENST00000531430 RTTNQ86VV8 2226 aa8.53□□□□□ -1.04
NEDD8-206ENST00000531430 NINQ8N4C6 2090 aa8.52□□□□□ -1.05
NEDD8-206ENST00000531430 FBN3Q75N90 2809 aa8.52□□□□□ -1.05
NEDD8-206ENST00000531430 KDM4EB2RXH2 506 aaPredicted RBP8.52□□□□□ -1.05
NEDD8-206ENST00000531430 EEF1E1-BLOC1S5C9J1V9 151 aa8.52□□□□□ -1.05
NEDD8-206ENST00000531430 CES2O00748 559 aa8.52□□□□□ -1.05
NEDD8-206ENST00000531430 ARHGEF9O43307 516 aa8.52□□□□□ -1.05
NEDD8-206ENST00000531430 EEF1E1O43324 174 aaKnown RBP8.52□□□□□ -1.05
NEDD8-206ENST00000531430 SH3BGRLO75368 114 aa8.52□□□□□ -1.05
NEDD8-206ENST00000531430 WDR47O94967 919 aa8.52□□□□□ -1.05
NEDD8-206ENST00000531430 ACSL3O95573 720 aa8.52□□□□□ -1.05
NEDD8-206ENST00000531430 AHSGP02765 367 aa8.52□□□□□ -1.05
NEDD8-206ENST00000531430 C1GALT1C1LP0DN25 315 aa8.52□□□□□ -1.05
NEDD8-206ENST00000531430 CERS1P27544 350 aa8.52□□□□□ -1.05
NEDD8-206ENST00000531430 HOXC12P31275 282 aa8.52□□□□□ -1.05
NEDD8-206ENST00000531430 HNRNPH1P31943 449 aaKnown RBP8.52□□□□□ -1.05
NEDD8-206ENST00000531430 GDF5P43026 501 aa8.52□□□□□ -1.05
NEDD8-206ENST00000531430 MSH2P43246 934 aa8.52□□□□□ -1.05
NEDD8-206ENST00000531430 AP1S2P56377 157 aa8.52□□□□□ -1.05
NEDD8-206ENST00000531430 DCAF7P61962 342 aa8.52□□□□□ -1.05
NEDD8-206ENST00000531430 FOXO1Q12778 655 aa8.52□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 47.6 ms