RNA–Protein interactions for RNA: ENST00000530546.5

USP35-207, Transcript of ubiquitin specific peptidase 35, humanhuman

TSL 1 (best)

Gene USP35, Length 2,986 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP35-207ENST00000530546 DNAJB9Q9UBS3 223 aa11.06□□□□□ -0.64
USP35-207ENST00000530546 LINC01565O15544 149 aa11.05□□□□□ -0.64
USP35-207ENST00000530546 CTRB1P17538 263 aa11.05□□□□□ -0.64
USP35-207ENST00000530546 ALOX12P18054 663 aa11.05□□□□□ -0.64
USP35-207ENST00000530546 SEC13P55735 322 aa11.05□□□□□ -0.64
USP35-207ENST00000530546 CXCR4P61073 352 aa11.05□□□□□ -0.64
USP35-207ENST00000530546 TAP2Q03519 686 aa11.05□□□□□ -0.64
USP35-207ENST00000530546 MTAPQ13126 283 aa11.05□□□□□ -0.64
USP35-207ENST00000530546 CDK5R2Q13319 367 aa11.05□□□□□ -0.64
USP35-207ENST00000530546 LAPTM4AQ15012 233 aa11.05□□□□□ -0.64
USP35-207ENST00000530546 TMEM52BQ4KMG9 183 aa11.05□□□□□ -0.64
USP35-207ENST00000530546 ZC3H12BQ5HYM0 836 aaKnown RBP11.05□□□□□ -0.64
USP35-207ENST00000530546 CTRB2Q6GPI1 263 aa11.05□□□□□ -0.64
USP35-207ENST00000530546 CPA6Q8N4T0 437 aa11.05□□□□□ -0.64
USP35-207ENST00000530546 SETD9Q8NE22 299 aa11.05□□□□□ -0.64
USP35-207ENST00000530546 TOR1AIP2Q8NFQ8 470 aa11.05□□□□□ -0.64
USP35-207ENST00000530546 OR4K1Q8NGD4 311 aa11.05□□□□□ -0.64
USP35-207ENST00000530546 DNAJB8Q8NHS0 232 aa11.05□□□□□ -0.64
USP35-207ENST00000530546 ZNF717Q9BY31 904 aaPredicted RBP11.05□□□□□ -0.64
USP35-207ENST00000530546 ZDHHC5Q9C0B5 715 aa11.05□□□□□ -0.64
USP35-207ENST00000530546 EPHX3Q9H6B9 360 aa11.05□□□□□ -0.64
USP35-207ENST00000530546 AASDHPPTQ9NRN7 309 aa11.05□□□□□ -0.64
USP35-207ENST00000530546 ACOXLQ9NUZ1 547 aa11.05□□□□□ -0.64
USP35-207ENST00000530546 VPS4AQ9UN37 437 aa11.05□□□□□ -0.64
USP35-207ENST00000530546 TEX51A0A1B0GUA7 166 aa11.05□□□□□ -0.64
USP35-207ENST00000530546 CAPN5O15484 640 aaPredicted RBP11.05□□□□□ -0.64
USP35-207ENST00000530546 SCN2BO60939 215 aa11.05□□□□□ -0.64
USP35-207ENST00000530546 DIRAS1O95057 198 aa11.05□□□□□ -0.64
USP35-207ENST00000530546 ANGPTL1O95841 491 aa11.05□□□□□ -0.64
USP35-207ENST00000530546 POU2F2P09086 479 aa11.05□□□□□ -0.64
USP35-207ENST00000530546 C1GALT1C1LP0DN25 315 aa11.05□□□□□ -0.64
USP35-207ENST00000530546 HOXB9P17482 250 aaPredicted RBP11.05□□□□□ -0.64
USP35-207ENST00000530546 ETV6P41212 452 aa11.05□□□□□ -0.64
USP35-207ENST00000530546 PNLIPRP1P54315 467 aa11.05□□□□□ -0.64
USP35-207ENST00000530546 SLC35A2P78381 396 aa11.05□□□□□ -0.64
USP35-207ENST00000530546 MC1RQ01726 317 aa11.05□□□□□ -0.64
USP35-207ENST00000530546 ZNF765Q7L2R6 523 aa11.05□□□□□ -0.64
USP35-207ENST00000530546 CADM2Q8N3J6 435 aa11.05□□□□□ -0.64
USP35-207ENST00000530546 WDR48Q8TAF3 677 aa11.05□□□□□ -0.64
USP35-207ENST00000530546 GANCQ8TET4 914 aa11.05□□□□□ -0.64
USP35-207ENST00000530546 MARVELD3Q96A59 401 aa11.05□□□□□ -0.64
USP35-207ENST00000530546 FCRL1Q96LA6 429 aa11.05□□□□□ -0.64
USP35-207ENST00000530546 SCN3BQ9NY72 215 aa11.05□□□□□ -0.64
USP35-207ENST00000530546 AP3M1Q9Y2T2 418 aa11.05□□□□□ -0.64
USP35-207ENST00000530546 OR1A2Q9Y585 309 aa11.05□□□□□ -0.64
USP35-207ENST00000530546 TRANK1O15050 2925 aa11.05□□□□□ -0.64
USP35-207ENST00000530546 ALPK3Q96L96 1907 aa11.05□□□□□ -0.64
USP35-207ENST00000530546 ATG2BQ96BY7 2078 aa11.05□□□□□ -0.64
USP35-207ENST00000530546 REV3LO60673 3130 aa11.05□□□□□ -0.64
USP35-207ENST00000530546 SERTM1A2A2V5 107 aa11.04□□□□□ -0.64
USP35-207ENST00000530546 PIPSLA2A3N6 862 aa11.04□□□□□ -0.64
USP35-207ENST00000530546 NPIPB8E9PQR5 432 aa11.04□□□□□ -0.64
USP35-207ENST00000530546 SCAMP1O15126 338 aa11.04□□□□□ -0.64
USP35-207ENST00000530546 SCAMP2O15127 329 aaKnown RBP11.04□□□□□ -0.64
USP35-207ENST00000530546 NUDT7P0C024 238 aa11.04□□□□□ -0.64
USP35-207ENST00000530546 GTF2E2P29084 291 aaKnown RBP11.04□□□□□ -0.64
USP35-207ENST00000530546 AQP1P29972 269 aa11.04□□□□□ -0.64
USP35-207ENST00000530546 CD6P30203 668 aa11.04□□□□□ -0.64
USP35-207ENST00000530546 GDI1P31150 447 aa11.04□□□□□ -0.64
USP35-207ENST00000530546 DPTQ07507 201 aa11.04□□□□□ -0.64
USP35-207ENST00000530546 PIP5KL1Q5T9C9 394 aa11.04□□□□□ -0.64
USP35-207ENST00000530546 ZNF438Q7Z4V0 828 aa11.04□□□□□ -0.64
USP35-207ENST00000530546 TMEM179BQ7Z7N9 219 aa11.04□□□□□ -0.64
USP35-207ENST00000530546 AMZ2Q86W34 360 aa11.04□□□□□ -0.64
USP35-207ENST00000530546 OR2L2Q8NH16 312 aa11.04□□□□□ -0.64
USP35-207ENST00000530546 SETD6Q8TBK2 473 aa11.04□□□□□ -0.64
USP35-207ENST00000530546 SLC5A11Q8WWX8 675 aa11.04□□□□□ -0.64
USP35-207ENST00000530546 RNF170Q96K19 258 aa11.04□□□□□ -0.64
USP35-207ENST00000530546 RPP25Q9BUL9 199 aaKnown RBP11.04□□□□□ -0.64
USP35-207ENST00000530546 C6orf62Q9GZU0 229 aaPredicted RBP11.04□□□□□ -0.64
USP35-207ENST00000530546 THAP10Q9P2Z0 257 aaPredicted RBP11.04□□□□□ -0.64
USP35-207ENST00000530546 ERVK-18Q9QC07 812 aa11.04□□□□□ -0.64
USP35-207ENST00000530546 SERGEFQ9UGK8 458 aa11.04□□□□□ -0.64
USP35-207ENST00000530546 RAPGEFL1Q9UHV5 662 aa11.04□□□□□ -0.64
USP35-207ENST00000530546 PCDHGB6Q9Y5F9 930 aa11.04□□□□□ -0.64
USP35-207ENST00000530546 STON1Q9Y6Q2 735 aa11.04□□□□□ -0.64
USP35-207ENST00000530546 HSPE1-MOB4S4R3N1 261 aa11.04□□□□□ -0.64
USP35-207ENST00000530546 LRRK1Q38SD2 2015 aa11.04□□□□□ -0.64
USP35-207ENST00000530546 A0A1W2PP55 124 aa11.04□□□□□ -0.64
USP35-207ENST00000530546 EPOPA6NHQ4 379 aa11.04□□□□□ -0.64
USP35-207ENST00000530546 LOC110117498-PIK3R3F6TDL0 507 aa11.04□□□□□ -0.64
USP35-207ENST00000530546 LATO43561 262 aa11.04□□□□□ -0.64
USP35-207ENST00000530546 TIA1P31483 386 aaKnown RBP eCLIP11.04□□□□□ -0.64
USP35-207ENST00000530546 MAPK9P45984 424 aa11.04□□□□□ -0.64
USP35-207ENST00000530546 CYP4F2P78329 520 aa11.04□□□□□ -0.64
USP35-207ENST00000530546 GPLD1P80108 840 aa11.04□□□□□ -0.64
USP35-207ENST00000530546 IL1RL1Q01638 556 aa11.04□□□□□ -0.64
USP35-207ENST00000530546 TAGLNQ01995 201 aaKnown RBP11.04□□□□□ -0.64
USP35-207ENST00000530546 GPR50Q13585 617 aa11.04□□□□□ -0.64
USP35-207ENST00000530546 WSCD2Q2TBF2 565 aa11.04□□□□□ -0.64
USP35-207ENST00000530546 HIST2H2AA3Q6FI13 130 aa11.04□□□□□ -0.64
USP35-207ENST00000530546 COMMD6Q7Z4G1 85 aa11.04□□□□□ -0.64
USP35-207ENST00000530546 C11orf96Q7Z7L8 435 aa11.04□□□□□ -0.64
USP35-207ENST00000530546 NOXA1Q86UR1 476 aa11.04□□□□□ -0.64
USP35-207ENST00000530546 CHTF18Q8WVB6 975 aa11.04□□□□□ -0.64
USP35-207ENST00000530546 PIK3R3Q92569 461 aa11.04□□□□□ -0.64
USP35-207ENST00000530546 PYURFQ96I23 114 aa11.04□□□□□ -0.64
USP35-207ENST00000530546 MAP6Q96JE9 813 aa11.04□□□□□ -0.64
USP35-207ENST00000530546 ZNF514Q96K75 400 aaPredicted RBP11.04□□□□□ -0.64
USP35-207ENST00000530546 APOL4Q9BPW4 351 aa11.04□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms