RNA–Protein interactions for RNA: ENST00000529002.2

SSRP1-204, Transcript of structure specific recognition protein 1, humanhuman

TSL 5

Gene SSRP1, Length 648 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSRP1-204ENST00000529002 SEL1L2Q5TEA6 688 aa17.48■□□□□ 0.39
SSRP1-204ENST00000529002 PRAMEF20Q5VT98 475 aa17.48■□□□□ 0.39
SSRP1-204ENST00000529002 UGT3A1Q6NUS8 523 aa17.48■□□□□ 0.39
SSRP1-204ENST00000529002 PAQR3Q6TCH7 311 aa17.48■□□□□ 0.39
SSRP1-204ENST00000529002 P3H2Q8IVL5 708 aa17.48■□□□□ 0.39
SSRP1-204ENST00000529002 GOLM1Q8NBJ4 401 aa17.48■□□□□ 0.39
SSRP1-204ENST00000529002 SLC5A11Q8WWX8 675 aa17.48■□□□□ 0.39
SSRP1-204ENST00000529002 LRRC46Q96FV0 321 aa17.48■□□□□ 0.39
SSRP1-204ENST00000529002 CSF3RQ99062 836 aa17.48■□□□□ 0.39
SSRP1-204ENST00000529002 FRMD8P1Q9BZ68 369 aaPredicted RBP17.48■□□□□ 0.39
SSRP1-204ENST00000529002 OR8D2Q9GZM6 311 aa17.48■□□□□ 0.39
SSRP1-204ENST00000529002 ZNF703Q9H7S9 590 aaPredicted RBP17.48■□□□□ 0.39
SSRP1-204ENST00000529002 CLK4Q9HAZ1 481 aaKnown RBP17.48■□□□□ 0.39
SSRP1-204ENST00000529002 TRMT6Q9UJA5 497 aaKnown RBP17.48■□□□□ 0.39
SSRP1-204ENST00000529002 MED12LQ86YW9 2145 aa17.47■□□□□ 0.39
SSRP1-204ENST00000529002 PAMP19021 973 aa17.47■□□□□ 0.39
SSRP1-204ENST00000529002 KCNJ1P48048 391 aa17.47■□□□□ 0.39
SSRP1-204ENST00000529002 RNF4P78317 190 aa17.47■□□□□ 0.39
SSRP1-204ENST00000529002 DUPD1Q68J44 220 aa17.47■□□□□ 0.39
SSRP1-204ENST00000529002 KIAA1328Q86T90 577 aa17.47■□□□□ 0.39
SSRP1-204ENST00000529002 FBXW8Q8N3Y1 598 aa17.47■□□□□ 0.39
SSRP1-204ENST00000529002 TBC1D19Q8N5T2 526 aa17.47■□□□□ 0.39
SSRP1-204ENST00000529002 PTPMT1Q8WUK0 201 aaPredicted RBP17.47■□□□□ 0.39
SSRP1-204ENST00000529002 ARL15Q9NXU5 204 aa17.47■□□□□ 0.39
SSRP1-204ENST00000529002 CLCA3PQ9Y6N3 262 aa17.47■□□□□ 0.39
SSRP1-204ENST00000529002 CAPN6Q9Y6Q1 641 aa17.47■□□□□ 0.39
SSRP1-204ENST00000529002 ZCWPW2A0A1B0GU75 182 aa17.46■□□□□ 0.39
SSRP1-204ENST00000529002 LRRC3CA6NJW4 275 aa17.46■□□□□ 0.39
SSRP1-204ENST00000529002 AP3B1O00203 1094 aa17.46■□□□□ 0.39
SSRP1-204ENST00000529002 ARHGEF9O43307 516 aa17.46■□□□□ 0.39
SSRP1-204ENST00000529002 GUCA1CO95843 209 aa17.46■□□□□ 0.39
SSRP1-204ENST00000529002 EPPINO95925 133 aa17.46■□□□□ 0.39
SSRP1-204ENST00000529002 TPSB2P20231 275 aa17.46■□□□□ 0.39
SSRP1-204ENST00000529002 HSD17B7P56937 341 aa17.46■□□□□ 0.39
SSRP1-204ENST00000529002 RAB38P57729 211 aa17.46■□□□□ 0.39
SSRP1-204ENST00000529002 TRIP13Q15645 432 aaPredicted RBP17.46■□□□□ 0.39
SSRP1-204ENST00000529002 TPSAB1Q15661 275 aa17.46■□□□□ 0.39
SSRP1-204ENST00000529002 ELAVL1Q15717 326 aaKnown RBP17.46■□□□□ 0.39
SSRP1-204ENST00000529002 ANKRD22Q5VYY1 191 aa17.46■□□□□ 0.39
SSRP1-204ENST00000529002 CAND1Q86VP6 1230 aaKnown RBP17.46■□□□□ 0.39
SSRP1-204ENST00000529002 PALM2Q8IXS6 379 aa17.46■□□□□ 0.39
SSRP1-204ENST00000529002 SYCE1Q8N0S2 351 aa17.46■□□□□ 0.39
SSRP1-204ENST00000529002 TMEM132CQ8N3T6 1108 aa17.46■□□□□ 0.39
SSRP1-204ENST00000529002 NEIL3Q8TAT5 605 aa17.46■□□□□ 0.39
SSRP1-204ENST00000529002 ZNF592Q92610 1267 aa17.46■□□□□ 0.39
SSRP1-204ENST00000529002 LINGO1Q96FE5 620 aa17.46■□□□□ 0.39
SSRP1-204ENST00000529002 SGCZQ96LD1 299 aa17.46■□□□□ 0.39
SSRP1-204ENST00000529002 WDR83Q9BRX9 315 aaKnown RBP17.46■□□□□ 0.39
SSRP1-204ENST00000529002 PROK2Q9HC23 129 aa17.46■□□□□ 0.39
SSRP1-204ENST00000529002 HOMER3Q9NSC5 361 aa17.46■□□□□ 0.39
SSRP1-204ENST00000529002 FOXD3Q9UJU5 478 aaPredicted RBP17.46■□□□□ 0.39
SSRP1-204ENST00000529002 FBXO5Q9UKT4 447 aa17.46■□□□□ 0.39
SSRP1-204ENST00000529002 URADA6NGE7 173 aa17.45■□□□□ 0.38
SSRP1-204ENST00000529002 EEF1E1-BLOC1S5C9J1V9 151 aa17.45■□□□□ 0.38
SSRP1-204ENST00000529002 EIF3FO00303 357 aaPredicted RBP17.45■□□□□ 0.38
SSRP1-204ENST00000529002 EEF1E1O43324 174 aaKnown RBP17.45■□□□□ 0.38
SSRP1-204ENST00000529002 SERPINA6P08185 405 aa17.45■□□□□ 0.38
SSRP1-204ENST00000529002 HNRNPH1P31943 449 aaKnown RBP17.45■□□□□ 0.38
SSRP1-204ENST00000529002 VPS41P49754 854 aa17.45■□□□□ 0.38
SSRP1-204ENST00000529002 PPP2R2BQ00005 443 aa17.45■□□□□ 0.38
SSRP1-204ENST00000529002 ID2Q02363 134 aa17.45■□□□□ 0.38
SSRP1-204ENST00000529002 ASPHQ12797 758 aa17.45■□□□□ 0.38
SSRP1-204ENST00000529002 SP140Q13342 867 aa17.45■□□□□ 0.38
SSRP1-204ENST00000529002 RBM20Q5T481 1227 aaKnown RBP17.45■□□□□ 0.38
SSRP1-204ENST00000529002 MAATS1Q7Z4T9 603 aa17.45■□□□□ 0.38
SSRP1-204ENST00000529002 TMPRSS11BQ86T26 416 aa17.45■□□□□ 0.38
SSRP1-204ENST00000529002 KIF18BQ86Y91 864 aa17.45■□□□□ 0.38
SSRP1-204ENST00000529002 MYO1HQ8N1T3 1032 aa17.45■□□□□ 0.38
SSRP1-204ENST00000529002 TRPV3Q8NET8 790 aa17.45■□□□□ 0.38
SSRP1-204ENST00000529002 JSRP1Q96MG2 331 aaPredicted RBP17.45■□□□□ 0.38
SSRP1-204ENST00000529002 TSGA10Q9BZW7 698 aa17.45■□□□□ 0.38
SSRP1-204ENST00000529002 ZNF629Q9UEG4 869 aaPredicted RBP17.45■□□□□ 0.38
SSRP1-204ENST00000529002 TRPS1Q9UHF7 1281 aa17.45■□□□□ 0.38
SSRP1-204ENST00000529002 IKZF3Q9UKT9 509 aa17.45■□□□□ 0.38
SSRP1-204ENST00000529002 C15orf38-AP3S2A0A0A6YYH1 394 aa17.44■□□□□ 0.38
SSRP1-204ENST00000529002 ERI3O43414 337 aaKnown RBP17.44■□□□□ 0.38
SSRP1-204ENST00000529002 IPO7O95373 1038 aaKnown RBP17.44■□□□□ 0.38
SSRP1-204ENST00000529002 ETHE1O95571 254 aa17.44■□□□□ 0.38
SSRP1-204ENST00000529002 HIST1H2AGP0C0S8 130 aaPredicted RBP17.44■□□□□ 0.38
SSRP1-204ENST00000529002 HIST1H2ADP20671 130 aa17.44■□□□□ 0.38
SSRP1-204ENST00000529002 CDKN2DP55273 166 aa17.44■□□□□ 0.38
SSRP1-204ENST00000529002 KCNJ2P63252 427 aa17.44■□□□□ 0.38
SSRP1-204ENST00000529002 OPN5Q6U736 354 aa17.44■□□□□ 0.38
SSRP1-204ENST00000529002 GSTA5Q7RTV2 222 aa17.44■□□□□ 0.38
SSRP1-204ENST00000529002 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP17.44■□□□□ 0.38
SSRP1-204ENST00000529002 AGGF1Q8N302 714 aaeCLIP17.44■□□□□ 0.38
SSRP1-204ENST00000529002 LIX1Q8N485 282 aa17.44■□□□□ 0.38
SSRP1-204ENST00000529002 SLC2A12Q8TD20 617 aa17.44■□□□□ 0.38
SSRP1-204ENST00000529002 FAR2Q96K12 515 aa17.44■□□□□ 0.38
SSRP1-204ENST00000529002 HIST1H2AHQ96KK5 128 aa17.44■□□□□ 0.38
SSRP1-204ENST00000529002 HIST1H2AJQ99878 128 aa17.44■□□□□ 0.38
SSRP1-204ENST00000529002 H2AFJQ9BTM1 129 aa17.44■□□□□ 0.38
SSRP1-204ENST00000529002 ALOXE3Q9BYJ1 711 aa17.44■□□□□ 0.38
SSRP1-204ENST00000529002 SH2D2AQ9NP31 389 aa17.44■□□□□ 0.38
SSRP1-204ENST00000529002 C20orf96Q9NUD7 363 aaPredicted RBP17.44■□□□□ 0.38
SSRP1-204ENST00000529002 C17orf105B2RV13 164 aa17.43■□□□□ 0.38
SSRP1-204ENST00000529002 SMPD2O60906 423 aa17.43■□□□□ 0.38
SSRP1-204ENST00000529002 LDB3O75112 727 aa17.43■□□□□ 0.38
SSRP1-204ENST00000529002 IL2RAP01589 272 aa17.43■□□□□ 0.38
SSRP1-204ENST00000529002 TNNI3P19429 210 aa17.43■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms