RNA–Protein interactions for RNA: ENST00000528930.5

SSBP3-212, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 1 (best)

Gene SSBP3, Length 862 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-212ENST00000528930 MKKSQ9NPJ1 570 aaPredicted RBP7.96□□□□□ -1.14
SSBP3-212ENST00000528930 MTRF1LQ9UGC7 380 aaKnown RBP7.96□□□□□ -1.14
SSBP3-212ENST00000528930 ZFP69BQ9UJL9 534 aa7.96□□□□□ -1.14
SSBP3-212ENST00000528930 C3orf18Q9UK00 162 aa7.96□□□□□ -1.14
SSBP3-212ENST00000528930 FBXL4Q9UKA2 621 aa7.96□□□□□ -1.14
SSBP3-212ENST00000528930 PTBP2Q9UKA9 531 aaKnown RBP7.96□□□□□ -1.14
SSBP3-212ENST00000528930 CSAG2Q9Y5P2 127 aa7.96□□□□□ -1.14
SSBP3-212ENST00000528930 SLC22A7Q9Y694 548 aa7.96□□□□□ -1.14
SSBP3-212ENST00000528930 KCNE2Q9Y6J6 123 aa7.96□□□□□ -1.14
SSBP3-212ENST00000528930 IDSB3KWA1 339 aa7.95□□□□□ -1.14
SSBP3-212ENST00000528930 NDUFS4O43181 175 aa7.95□□□□□ -1.14
SSBP3-212ENST00000528930 DNAJB6O75190 326 aa7.95□□□□□ -1.14
SSBP3-212ENST00000528930 SASH3O75995 380 aa7.95□□□□□ -1.14
SSBP3-212ENST00000528930 WDR47O94967 919 aa7.95□□□□□ -1.14
SSBP3-212ENST00000528930 ACSL3O95573 720 aa7.95□□□□□ -1.14
SSBP3-212ENST00000528930 TBX6O95947 436 aaPredicted RBP7.95□□□□□ -1.14
SSBP3-212ENST00000528930 B3GALT4O96024 378 aa7.95□□□□□ -1.14
SSBP3-212ENST00000528930 ALDOAP04075 364 aaKnown RBP7.95□□□□□ -1.14
SSBP3-212ENST00000528930 ALPPP05187 535 aa7.95□□□□□ -1.14
SSBP3-212ENST00000528930 SLC35G6P0C7Q6 338 aa7.95□□□□□ -1.14
SSBP3-212ENST00000528930 C1GALT1C1LP0DN25 315 aa7.95□□□□□ -1.14
SSBP3-212ENST00000528930 COX6A1P12074 109 aa7.95□□□□□ -1.14
SSBP3-212ENST00000528930 MTHFD2P13995 350 aa7.95□□□□□ -1.14
SSBP3-212ENST00000528930 GNAZP19086 355 aa7.95□□□□□ -1.14
SSBP3-212ENST00000528930 EPORP19235 508 aa7.95□□□□□ -1.14
SSBP3-212ENST00000528930 TFEBP19484 476 aa7.95□□□□□ -1.14
SSBP3-212ENST00000528930 HOXC12P31275 282 aa7.95□□□□□ -1.14
SSBP3-212ENST00000528930 PHBP35232 272 aa7.95□□□□□ -1.14
SSBP3-212ENST00000528930 AHRP35869 848 aa7.95□□□□□ -1.14
SSBP3-212ENST00000528930 HSPA7P48741 367 aa7.95□□□□□ -1.14
SSBP3-212ENST00000528930 SMSP52788 366 aa7.95□□□□□ -1.14
SSBP3-212ENST00000528930 EMP2P54851 167 aa7.95□□□□□ -1.14
SSBP3-212ENST00000528930 IRF9Q00978 393 aa7.95□□□□□ -1.14
SSBP3-212ENST00000528930 CDC16Q13042 620 aa7.95□□□□□ -1.14
SSBP3-212ENST00000528930 AIMP2Q13155 320 aaKnown RBP7.95□□□□□ -1.14
SSBP3-212ENST00000528930 SLMAPQ14BN4 828 aa7.95□□□□□ -1.14
SSBP3-212ENST00000528930 RBBP7Q16576 425 aa7.95□□□□□ -1.14
SSBP3-212ENST00000528930 BEND6Q5SZJ8 279 aaPredicted RBP7.95□□□□□ -1.14
SSBP3-212ENST00000528930 MROH9Q5TGP6 573 aa7.95□□□□□ -1.14
SSBP3-212ENST00000528930 B3GNTL1Q67FW5 361 aaPredicted RBP7.95□□□□□ -1.14
SSBP3-212ENST00000528930 HIST2H2BDQ6DRA6 164 aa7.95□□□□□ -1.14
SSBP3-212ENST00000528930 SULT1C3Q6IMI6 304 aa7.95□□□□□ -1.14
SSBP3-212ENST00000528930 WDR93Q6P2C0 686 aa7.95□□□□□ -1.14
SSBP3-212ENST00000528930 TMEM205Q6UW68 189 aa7.95□□□□□ -1.14
SSBP3-212ENST00000528930 CEP128Q6ZU80 1094 aa7.95□□□□□ -1.14
SSBP3-212ENST00000528930 RAPH1Q70E73 1250 aa7.95□□□□□ -1.14
SSBP3-212ENST00000528930 TMPRSS11BQ86T26 416 aa7.95□□□□□ -1.14
SSBP3-212ENST00000528930 TCAIMQ8N3R3 496 aa7.95□□□□□ -1.14
SSBP3-212ENST00000528930 ZADH2Q8N4Q0 377 aa7.95□□□□□ -1.14
SSBP3-212ENST00000528930 AMER2Q8N7J2 671 aa7.95□□□□□ -1.14
SSBP3-212ENST00000528930 CLEC1AQ8NC01 280 aa7.95□□□□□ -1.14
SSBP3-212ENST00000528930 OR51Q1Q8NH59 317 aa7.95□□□□□ -1.14
SSBP3-212ENST00000528930 ZCCHC10Q8TBK6 192 aa7.95□□□□□ -1.14
SSBP3-212ENST00000528930 STAG3L4Q8TBR4 150 aa7.95□□□□□ -1.14
SSBP3-212ENST00000528930 UTP15Q8TED0 518 aaKnown RBP7.95□□□□□ -1.14
SSBP3-212ENST00000528930 CREB3L4Q8TEY5 395 aa7.95□□□□□ -1.14
SSBP3-212ENST00000528930 SLC44A1Q8WWI5 657 aa7.95□□□□□ -1.14
SSBP3-212ENST00000528930 TM9SF4Q92544 642 aa7.95□□□□□ -1.14
SSBP3-212ENST00000528930 NXNL1Q96CM4 212 aa7.95□□□□□ -1.14
SSBP3-212ENST00000528930 GPR78Q96P69 363 aa7.95□□□□□ -1.14
SSBP3-212ENST00000528930 WDR77Q9BQA1 342 aaPredicted RBP7.95□□□□□ -1.14
SSBP3-212ENST00000528930 AIF1LQ9BQI0 150 aa7.95□□□□□ -1.14
SSBP3-212ENST00000528930 YIPF2Q9BWQ6 316 aa7.95□□□□□ -1.14
SSBP3-212ENST00000528930 TSPAN10Q9H1Z9 355 aaPredicted RBP7.95□□□□□ -1.14
SSBP3-212ENST00000528930 LIME1Q9H400 295 aa7.95□□□□□ -1.14
SSBP3-212ENST00000528930 KLHL31Q9H511 634 aa7.95□□□□□ -1.14
SSBP3-212ENST00000528930 ALG9Q9H6U8 611 aa7.95□□□□□ -1.14
SSBP3-212ENST00000528930 NMRAL1Q9HBL8 299 aa7.95□□□□□ -1.14
SSBP3-212ENST00000528930 ZBTB20Q9HC78 741 aaPredicted RBP7.95□□□□□ -1.14
SSBP3-212ENST00000528930 ANKHQ9HCJ1 492 aa7.95□□□□□ -1.14
SSBP3-212ENST00000528930 SNX15Q9NRS6 342 aa7.95□□□□□ -1.14
SSBP3-212ENST00000528930 C14orf105Q9NVL8 296 aa7.95□□□□□ -1.14
SSBP3-212ENST00000528930 WWOXQ9NZC7 414 aa7.95□□□□□ -1.14
SSBP3-212ENST00000528930 GPRC5BQ9NZH0 403 aa7.95□□□□□ -1.14
SSBP3-212ENST00000528930 ACOT9Q9Y305 439 aa7.95□□□□□ -1.14
SSBP3-212ENST00000528930 NAALAD2Q9Y3Q0 740 aa7.95□□□□□ -1.14
SSBP3-212ENST00000528930 ASB1Q9Y576 335 aa7.95□□□□□ -1.14
SSBP3-212ENST00000528930 MGAM2Q2M2H8 2515 aa7.95□□□□□ -1.14
SSBP3-212ENST00000528930 HRNRQ86YZ3 2850 aaPredicted RBP7.95□□□□□ -1.14
SSBP3-212ENST00000528930 LOC102723996A0A087X1L8 192 aa7.94□□□□□ -1.14
SSBP3-212ENST00000528930 IGHV1-45A0A0A0MS14 117 aa7.94□□□□□ -1.14
SSBP3-212ENST00000528930 A0A0G2JK05 382 aa7.94□□□□□ -1.14
SSBP3-212ENST00000528930 KRTAP4-8A0A0G2JLE6 195 aa7.94□□□□□ -1.14
SSBP3-212ENST00000528930 OR2W5A6NFC9 320 aa7.94□□□□□ -1.14
SSBP3-212ENST00000528930 C4orf51C9J302 202 aa7.94□□□□□ -1.14
SSBP3-212ENST00000528930 GALR3O60755 368 aaPredicted RBP7.94□□□□□ -1.14
SSBP3-212ENST00000528930 RDH16O75452 317 aa7.94□□□□□ -1.14
SSBP3-212ENST00000528930 CRLF1O75462 422 aa7.94□□□□□ -1.14
SSBP3-212ENST00000528930 STK16O75716 305 aa7.94□□□□□ -1.14
SSBP3-212ENST00000528930 IPO13O94829 963 aaKnown RBP7.94□□□□□ -1.14
SSBP3-212ENST00000528930 KLHL18O94889 574 aa7.94□□□□□ -1.14
SSBP3-212ENST00000528930 KLHL2O95198 593 aa7.94□□□□□ -1.14
SSBP3-212ENST00000528930 HPP00738 406 aa7.94□□□□□ -1.14
SSBP3-212ENST00000528930 SERPIND1P05546 499 aa7.94□□□□□ -1.14
SSBP3-212ENST00000528930 HEXBP07686 556 aa7.94□□□□□ -1.14
SSBP3-212ENST00000528930 LTA4HP09960 611 aaKnown RBP7.94□□□□□ -1.14
SSBP3-212ENST00000528930 ACPPP15309 386 aa7.94□□□□□ -1.14
SSBP3-212ENST00000528930 ALOX12P18054 663 aa7.94□□□□□ -1.14
SSBP3-212ENST00000528930 CD22P20273 847 aa7.94□□□□□ -1.14
SSBP3-212ENST00000528930 CXCR2P25025 360 aa7.94□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms