RNA–Protein interactions for RNA: ENST00000528402.5

ECHDC1-220, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 1 (best) BASIC

Gene ECHDC1, Length 1,449 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-220ENST00000528402 SLAMF1Q13291 335 aa14.03□□□□□ -0.16
ECHDC1-220ENST00000528402 TDGQ13569 410 aa14.03□□□□□ -0.16
ECHDC1-220ENST00000528402 C16orf72Q14CZ0 275 aa14.03□□□□□ -0.16
ECHDC1-220ENST00000528402 PRSS53Q2L4Q9 553 aa14.03□□□□□ -0.16
ECHDC1-220ENST00000528402 ALG11Q2TAA5 492 aa14.03□□□□□ -0.16
ECHDC1-220ENST00000528402 ZIK1Q3SY52 487 aaPredicted RBP14.03□□□□□ -0.16
ECHDC1-220ENST00000528402 NADK2Q4G0N4 442 aa14.03□□□□□ -0.16
ECHDC1-220ENST00000528402 TOR1AIP1Q5JTV8 583 aa14.03□□□□□ -0.16
ECHDC1-220ENST00000528402 COX20Q5RI15 118 aa14.03□□□□□ -0.16
ECHDC1-220ENST00000528402 MANEAQ5SRI9 462 aa14.03□□□□□ -0.16
ECHDC1-220ENST00000528402 NDUFAF5Q5TEU4 345 aa14.03□□□□□ -0.16
ECHDC1-220ENST00000528402 KIAA1614Q5VZ46 1190 aa14.03□□□□□ -0.16
ECHDC1-220ENST00000528402 TRIM48Q8IWZ4 208 aa14.03□□□□□ -0.16
ECHDC1-220ENST00000528402 SAMD14Q8IZD0 417 aaPredicted RBP14.03□□□□□ -0.16
ECHDC1-220ENST00000528402 PIK3C3Q8NEB9 887 aa14.03□□□□□ -0.16
ECHDC1-220ENST00000528402 SFXN5Q8TD22 340 aa14.03□□□□□ -0.16
ECHDC1-220ENST00000528402 GEMIN6Q8WXD5 167 aaKnown RBP14.03□□□□□ -0.16
ECHDC1-220ENST00000528402 NCSTNQ92542 709 aa14.03□□□□□ -0.16
ECHDC1-220ENST00000528402 HDAC2Q92769 488 aaKnown RBP14.03□□□□□ -0.16
ECHDC1-220ENST00000528402 GAL3ST3Q96A11 431 aa14.03□□□□□ -0.16
ECHDC1-220ENST00000528402 FBXL20Q96IG2 436 aa14.03□□□□□ -0.16
ECHDC1-220ENST00000528402 TPD52L3Q96J77 140 aa14.03□□□□□ -0.16
ECHDC1-220ENST00000528402 MUS81Q96NY9 551 aa14.03□□□□□ -0.16
ECHDC1-220ENST00000528402 TEFMQ96QE5 360 aaKnown RBP14.03□□□□□ -0.16
ECHDC1-220ENST00000528402 GAS2L1Q99501 681 aaPredicted RBP14.03□□□□□ -0.16
ECHDC1-220ENST00000528402 NRTNQ99748 197 aa14.03□□□□□ -0.16
ECHDC1-220ENST00000528402 C17orf62Q9BQA9 187 aa14.03□□□□□ -0.16
ECHDC1-220ENST00000528402 RUBCNLQ9H714 662 aa14.03□□□□□ -0.16
ECHDC1-220ENST00000528402 CXorf36Q9H7Y0 433 aa14.03□□□□□ -0.16
ECHDC1-220ENST00000528402 GIMAP4Q9NUV9 329 aa14.03□□□□□ -0.16
ECHDC1-220ENST00000528402 SPHK1Q9NYA1 384 aa14.03□□□□□ -0.16
ECHDC1-220ENST00000528402 UTS2RQ9UKP6 389 aa14.03□□□□□ -0.16
ECHDC1-220ENST00000528402 MAP4K5Q9Y4K4 846 aa14.03□□□□□ -0.16
ECHDC1-220ENST00000528402 ASB4Q9Y574 426 aa14.03□□□□□ -0.16
ECHDC1-220ENST00000528402 KLK4Q9Y5K2 254 aa14.03□□□□□ -0.16
ECHDC1-220ENST00000528402 LOC100130705A0A1B0GUX0 176 aa14.02□□□□□ -0.16
ECHDC1-220ENST00000528402 MYO1GB0I1T2 1018 aa14.02□□□□□ -0.16
ECHDC1-220ENST00000528402 H0Y8X5 98 aa14.02□□□□□ -0.16
ECHDC1-220ENST00000528402 ERI3O43414 337 aaKnown RBP14.02□□□□□ -0.16
ECHDC1-220ENST00000528402 GCM2O75603 506 aaPredicted RBP14.02□□□□□ -0.16
ECHDC1-220ENST00000528402 VIPP01282 170 aa14.02□□□□□ -0.16
ECHDC1-220ENST00000528402 ZNF10P21506 573 aaPredicted RBP14.02□□□□□ -0.16
ECHDC1-220ENST00000528402 IGFBP5P24593 272 aa14.02□□□□□ -0.16
ECHDC1-220ENST00000528402 CCT3P49368 545 aaKnown RBP14.02□□□□□ -0.16
ECHDC1-220ENST00000528402 HLCSP50747 726 aa14.02□□□□□ -0.16
ECHDC1-220ENST00000528402 KEAP1Q14145 624 aa14.02□□□□□ -0.16
ECHDC1-220ENST00000528402 GNA13Q14344 377 aa14.02□□□□□ -0.16
ECHDC1-220ENST00000528402 CNPY1Q3B7I2 92 aa14.02□□□□□ -0.16
ECHDC1-220ENST00000528402 SPDYE7PQ495Y7 208 aa14.02□□□□□ -0.16
ECHDC1-220ENST00000528402 IQCCQ4KMZ1 466 aa14.02□□□□□ -0.16
ECHDC1-220ENST00000528402 TJAP1Q5JTD0 557 aa14.02□□□□□ -0.16
ECHDC1-220ENST00000528402 KDM4DQ6B0I6 523 aa14.02□□□□□ -0.16
ECHDC1-220ENST00000528402 CEACAM20Q6UY09 585 aa14.02□□□□□ -0.16
ECHDC1-220ENST00000528402 C6orf120Q7Z4R8 191 aa14.02□□□□□ -0.16
ECHDC1-220ENST00000528402 VTCN1Q7Z7D3 282 aa14.02□□□□□ -0.16
ECHDC1-220ENST00000528402 TMEM179BQ7Z7N9 219 aa14.02□□□□□ -0.16
ECHDC1-220ENST00000528402 FBXL6Q8N531 539 aa14.02□□□□□ -0.16
ECHDC1-220ENST00000528402 ACOT4Q8N9L9 421 aa14.02□□□□□ -0.16
ECHDC1-220ENST00000528402 AVL9Q8NBF6 648 aa14.02□□□□□ -0.16
ECHDC1-220ENST00000528402 NFKBIDQ8NI38 313 aa14.02□□□□□ -0.16
ECHDC1-220ENST00000528402 MAL2Q969L2 176 aa14.02□□□□□ -0.16
ECHDC1-220ENST00000528402 EXOSC8Q96B26 276 aaKnown RBP14.02□□□□□ -0.16
ECHDC1-220ENST00000528402 GRIP2Q9C0E4 1043 aa14.02□□□□□ -0.16
ECHDC1-220ENST00000528402 WSB2Q9NYS7 404 aaPredicted RBP14.02□□□□□ -0.16
ECHDC1-220ENST00000528402 ABCG2Q9UNQ0 655 aa14.02□□□□□ -0.16
ECHDC1-220ENST00000528402 MRPS17Q9Y2R5 130 aaKnown RBP14.02□□□□□ -0.16
ECHDC1-220ENST00000528402 SAMHD1Q9Y3Z3 626 aaKnown RBP14.02□□□□□ -0.16
ECHDC1-220ENST00000528402 SNX8Q9Y5X2 465 aa14.02□□□□□ -0.16
ECHDC1-220ENST00000528402 LAMA2P24043 3122 aaKnown RBP14.01□□□□□ -0.17
ECHDC1-220ENST00000528402 OR2A25A4D2G3 310 aa14.01□□□□□ -0.17
ECHDC1-220ENST00000528402 AHCYL1O43865 530 aa14.01□□□□□ -0.17
ECHDC1-220ENST00000528402 SH3BP5O60239 455 aa14.01□□□□□ -0.17
ECHDC1-220ENST00000528402 C1QCP02747 245 aa14.01□□□□□ -0.17
ECHDC1-220ENST00000528402 IGHV4-34P06331 123 aa14.01□□□□□ -0.17
ECHDC1-220ENST00000528402 FESP07332 822 aa14.01□□□□□ -0.17
ECHDC1-220ENST00000528402 SLC35G6P0C7Q6 338 aa14.01□□□□□ -0.17
ECHDC1-220ENST00000528402 CHRNB1P11230 501 aa14.01□□□□□ -0.17
ECHDC1-220ENST00000528402 CD6P30203 668 aa14.01□□□□□ -0.17
ECHDC1-220ENST00000528402 IST1P53990 364 aa14.01□□□□□ -0.17
ECHDC1-220ENST00000528402 GABARAPL2P60520 117 aa14.01□□□□□ -0.17
ECHDC1-220ENST00000528402 KCNC4Q03721 635 aa14.01□□□□□ -0.17
ECHDC1-220ENST00000528402 KCNAB2Q13303 367 aa14.01□□□□□ -0.17
ECHDC1-220ENST00000528402 PRRT3Q5FWE3 981 aa14.01□□□□□ -0.17
ECHDC1-220ENST00000528402 SLC30A9Q6PML9 568 aa14.01□□□□□ -0.17
ECHDC1-220ENST00000528402 ASPGQ86U10 573 aa14.01□□□□□ -0.17
ECHDC1-220ENST00000528402 NRROSQ86YC3 692 aa14.01□□□□□ -0.17
ECHDC1-220ENST00000528402 PLD3Q8IV08 490 aa14.01□□□□□ -0.17
ECHDC1-220ENST00000528402 CAMKVQ8NCB2 501 aa14.01□□□□□ -0.17
ECHDC1-220ENST00000528402 SPPL2AQ8TCT8 520 aa14.01□□□□□ -0.17
ECHDC1-220ENST00000528402 BBS4Q96RK4 519 aa14.01□□□□□ -0.17
ECHDC1-220ENST00000528402 ZNF607Q96SK3 696 aa14.01□□□□□ -0.17
ECHDC1-220ENST00000528402 MBOAT4Q96T53 435 aa14.01□□□□□ -0.17
ECHDC1-220ENST00000528402 TUBA1CQ9BQE3 449 aa14.01□□□□□ -0.17
ECHDC1-220ENST00000528402 PCED1AQ9H1Q7 454 aa14.01□□□□□ -0.17
ECHDC1-220ENST00000528402 TTYH1Q9H313 450 aaPredicted RBP14.01□□□□□ -0.17
ECHDC1-220ENST00000528402 PRO3102Q9H379 93 aa14.01□□□□□ -0.17
ECHDC1-220ENST00000528402 VCX3AQ9NNX9 186 aa14.01□□□□□ -0.17
ECHDC1-220ENST00000528402 SIRT3Q9NTG7 399 aaPredicted RBP14.01□□□□□ -0.17
ECHDC1-220ENST00000528402 TEX10Q9NXF1 929 aaPredicted RBP14.01□□□□□ -0.17
ECHDC1-220ENST00000528402 PDP1Q9P0J1 537 aaPredicted RBP14.01□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms