RNA–Protein interactions for RNA: ENST00000527916.1

CPSF1-203, Transcript of cleavage and polyadenylation specific factor 1, humanhuman

TSL 5

Gene CPSF1, Length 506 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1-203ENST00000527916 ZNF358Q9NW07 568 aa9.82□□□□□ -0.84
CPSF1-203ENST00000527916 KLF13Q9Y2Y9 288 aaPredicted RBP9.82□□□□□ -0.84
CPSF1-203ENST00000527916 HIVEP2P31629 2446 aa9.81□□□□□ -0.84
CPSF1-203ENST00000527916 IGKV3D-11A0A0A0MRZ8 115 aa9.81□□□□□ -0.84
CPSF1-203ENST00000527916 TCRBV16S1A1N1A0A5B0 115 aa9.81□□□□□ -0.84
CPSF1-203ENST00000527916 CCDC189A1A4V9 331 aa9.81□□□□□ -0.84
CPSF1-203ENST00000527916 CTAGE15A4D2H0 777 aa9.81□□□□□ -0.84
CPSF1-203ENST00000527916 LRIT2A6NDA9 550 aa9.81□□□□□ -0.84
CPSF1-203ENST00000527916 SYNDIG1LA6NDD5 238 aa9.81□□□□□ -0.84
CPSF1-203ENST00000527916 ZNF860A6NHJ4 632 aa9.81□□□□□ -0.84
CPSF1-203ENST00000527916 ANKDD1BA6NHY2 528 aa9.81□□□□□ -0.84
CPSF1-203ENST00000527916 KLRC4-KLRK1H3BQV0 150 aa9.81□□□□□ -0.84
CPSF1-203ENST00000527916 CLGNO14967 610 aa9.81□□□□□ -0.84
CPSF1-203ENST00000527916 STK16O75716 305 aa9.81□□□□□ -0.84
CPSF1-203ENST00000527916 CDC123O75794 336 aaPredicted RBP9.81□□□□□ -0.84
CPSF1-203ENST00000527916 INHBBP09529 407 aa9.81□□□□□ -0.84
CPSF1-203ENST00000527916 CRABP2P29373 138 aa9.81□□□□□ -0.84
CPSF1-203ENST00000527916 STX2P32856 288 aa9.81□□□□□ -0.84
CPSF1-203ENST00000527916 PEX19P40855 299 aa9.81□□□□□ -0.84
CPSF1-203ENST00000527916 CASP2P42575 452 aa9.81□□□□□ -0.84
CPSF1-203ENST00000527916 RAB8AP61006 207 aa9.81□□□□□ -0.84
CPSF1-203ENST00000527916 PCDH1Q08174 1060 aa9.81□□□□□ -0.84
CPSF1-203ENST00000527916 ADPRMQ3LIE5 342 aa9.81□□□□□ -0.84
CPSF1-203ENST00000527916 KBTBD12Q3ZCT8 623 aa9.81□□□□□ -0.84
CPSF1-203ENST00000527916 TOR1AIP1Q5JTV8 583 aa9.81□□□□□ -0.84
CPSF1-203ENST00000527916 PAOXQ6QHF9 649 aa9.81□□□□□ -0.84
CPSF1-203ENST00000527916 ZDHHC24Q6UX98 284 aa9.81□□□□□ -0.84
CPSF1-203ENST00000527916 CCDC91Q7Z6B0 441 aa9.81□□□□□ -0.84
CPSF1-203ENST00000527916 CTAGE6Q86UF2 777 aa9.81□□□□□ -0.84
CPSF1-203ENST00000527916 RPS19BP1Q86WX3 136 aaKnown RBP9.81□□□□□ -0.84
CPSF1-203ENST00000527916 CTAGE3PQ8IX95 158 aa9.81□□□□□ -0.84
CPSF1-203ENST00000527916 ZZZ3Q8IYH5 903 aa9.81□□□□□ -0.84
CPSF1-203ENST00000527916 ARMC10Q8N2F6 343 aa9.81□□□□□ -0.84
CPSF1-203ENST00000527916 OR5M3Q8NGP4 307 aa9.81□□□□□ -0.84
CPSF1-203ENST00000527916 OR10Q1Q8NGQ4 319 aa9.81□□□□□ -0.84
CPSF1-203ENST00000527916 STAG3L4Q8TBR4 150 aa9.81□□□□□ -0.84
CPSF1-203ENST00000527916 NUDT8Q8WV74 236 aa9.81□□□□□ -0.84
CPSF1-203ENST00000527916 GAL3ST3Q96A11 431 aa9.81□□□□□ -0.84
CPSF1-203ENST00000527916 MS4A6EQ96DS6 147 aa9.81□□□□□ -0.84
CPSF1-203ENST00000527916 PTCD3Q96EY7 689 aaKnown RBP9.81□□□□□ -0.84
CPSF1-203ENST00000527916 PTCHD1Q96NR3 888 aa9.81□□□□□ -0.84
CPSF1-203ENST00000527916 NPAS2Q99743 824 aa9.81□□□□□ -0.84
CPSF1-203ENST00000527916 MDFIQ99750 246 aa9.81□□□□□ -0.84
CPSF1-203ENST00000527916 TMEM79Q9BSE2 394 aa9.81□□□□□ -0.84
CPSF1-203ENST00000527916 AICDAQ9GZX7 198 aa9.81□□□□□ -0.84
CPSF1-203ENST00000527916 RHBGQ9H310 441 aa9.81□□□□□ -0.84
CPSF1-203ENST00000527916 LIME1Q9H400 295 aa9.81□□□□□ -0.84
CPSF1-203ENST00000527916 CDCP1Q9H5V8 836 aa9.81□□□□□ -0.84
CPSF1-203ENST00000527916 DNAJC11Q9NVH1 559 aa9.81□□□□□ -0.84
CPSF1-203ENST00000527916 ZNF490Q9ULM2 529 aaPredicted RBP9.81□□□□□ -0.84
CPSF1-203ENST00000527916 L3MBTL1Q9Y468 752 aa9.81□□□□□ -0.84
CPSF1-203ENST00000527916 MMACHCQ9Y4U1 282 aa9.81□□□□□ -0.84
CPSF1-203ENST00000527916 MPDZO75970 2070 aa9.8□□□□□ -0.84
CPSF1-203ENST00000527916 A0A088AWK7 358 aa9.8□□□□□ -0.84
CPSF1-203ENST00000527916 NCF1BA6NI72 391 aaPredicted RBP9.8□□□□□ -0.84
CPSF1-203ENST00000527916 NCF1CA8MVU1 366 aaPredicted RBP9.8□□□□□ -0.84
CPSF1-203ENST00000527916 PSMD12O00232 456 aaPredicted RBP9.8□□□□□ -0.84
CPSF1-203ENST00000527916 PHGDHO43175 533 aaKnown RBP9.8□□□□□ -0.84
CPSF1-203ENST00000527916 HS6ST1O60243 411 aa9.8□□□□□ -0.84
CPSF1-203ENST00000527916 MAN1A2O60476 641 aa9.8□□□□□ -0.84
CPSF1-203ENST00000527916 B4GALT2O60909 372 aa9.8□□□□□ -0.84
CPSF1-203ENST00000527916 B3GALT4O96024 378 aa9.8□□□□□ -0.84
CPSF1-203ENST00000527916 NCF1P14598 390 aaPredicted RBP9.8□□□□□ -0.84
CPSF1-203ENST00000527916 TFEBP19484 476 aa9.8□□□□□ -0.84
CPSF1-203ENST00000527916 ZNF10P21506 573 aaPredicted RBP9.8□□□□□ -0.84
CPSF1-203ENST00000527916 HNF4AP41235 474 aa9.8□□□□□ -0.84
CPSF1-203ENST00000527916 KIR2DL3P43628 341 aa9.8□□□□□ -0.84
CPSF1-203ENST00000527916 HSD17B7P56937 341 aa9.8□□□□□ -0.84
CPSF1-203ENST00000527916 NUP107P57740 925 aa9.8□□□□□ -0.84
CPSF1-203ENST00000527916 OLR1P78380 273 aa9.8□□□□□ -0.84
CPSF1-203ENST00000527916 BTN3A2P78410 334 aa9.8□□□□□ -0.84
CPSF1-203ENST00000527916 BTG2P78543 158 aa9.8□□□□□ -0.84
CPSF1-203ENST00000527916 CKAP4Q07065 602 aaKnown RBP9.8□□□□□ -0.84
CPSF1-203ENST00000527916 LAPTM5Q13571 262 aa9.8□□□□□ -0.84
CPSF1-203ENST00000527916 SLBPQ14493 270 aaKnown RBP eCLIP9.8□□□□□ -0.84
CPSF1-203ENST00000527916 OR4D1Q15615 310 aa9.8□□□□□ -0.84
CPSF1-203ENST00000527916 TRADDQ15628 312 aa9.8□□□□□ -0.84
CPSF1-203ENST00000527916 TBCCQ15814 346 aa9.8□□□□□ -0.84
CPSF1-203ENST00000527916 C18orf21Q32NC0 220 aaPredicted RBP9.8□□□□□ -0.84
CPSF1-203ENST00000527916 TMEM198Q66K66 360 aa9.8□□□□□ -0.84
CPSF1-203ENST00000527916 ARSKQ6UWY0 536 aa9.8□□□□□ -0.84
CPSF1-203ENST00000527916 ISCA2Q86U28 154 aa9.8□□□□□ -0.84
CPSF1-203ENST00000527916 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP9.8□□□□□ -0.84
CPSF1-203ENST00000527916 CA13Q8N1Q1 262 aa9.8□□□□□ -0.84
CPSF1-203ENST00000527916 SPATA6LQ8N4H0 392 aa9.8□□□□□ -0.84
CPSF1-203ENST00000527916 LRRN4CLQ8ND94 238 aa9.8□□□□□ -0.84
CPSF1-203ENST00000527916 ARMC2Q8NEN0 867 aa9.8□□□□□ -0.84
CPSF1-203ENST00000527916 NFAM1Q8NET5 270 aaPredicted RBP9.8□□□□□ -0.84
CPSF1-203ENST00000527916 OR2L5Q8NG80 312 aa9.8□□□□□ -0.84
CPSF1-203ENST00000527916 FBF1Q8TES7 1133 aa9.8□□□□□ -0.84
CPSF1-203ENST00000527916 TSLPQ969D9 159 aa9.8□□□□□ -0.84
CPSF1-203ENST00000527916 FAR2Q96K12 515 aa9.8□□□□□ -0.84
CPSF1-203ENST00000527916 QRFPRQ96P65 431 aa9.8□□□□□ -0.84
CPSF1-203ENST00000527916 SMR3AQ99954 134 aa9.8□□□□□ -0.84
CPSF1-203ENST00000527916 GPATCH1Q9BRR8 931 aaKnown RBP9.8□□□□□ -0.84
CPSF1-203ENST00000527916 EFCAB11Q9BUY7 163 aa9.8□□□□□ -0.84
CPSF1-203ENST00000527916 RBCK1Q9BYM8 510 aa9.8□□□□□ -0.84
CPSF1-203ENST00000527916 CD244Q9BZW8 370 aa9.8□□□□□ -0.84
CPSF1-203ENST00000527916 NMRAL1Q9HBL8 299 aa9.8□□□□□ -0.84
CPSF1-203ENST00000527916 RASSF1Q9NS23 344 aa9.8□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms