RNA–Protein interactions for RNA: ENST00000527720.5

USH1C-207, Transcript of USH1 protein network component harmonin, humanhuman

TSL 1 (best) BASIC

Gene USH1C, Length 2,278 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USH1C-207ENST00000527720 C7orf61Q8IZ16 206 aa14.61□□□□□ -0.07
USH1C-207ENST00000527720 DENND6BQ8NEG7 585 aa14.61□□□□□ -0.07
USH1C-207ENST00000527720 HSPBAP1Q96EW2 488 aa14.61□□□□□ -0.07
USH1C-207ENST00000527720 ZBED6CLQ96FA7 236 aaPredicted RBP14.61□□□□□ -0.07
USH1C-207ENST00000527720 PRAP1Q96NZ9 151 aa14.61□□□□□ -0.07
USH1C-207ENST00000527720 DDX31Q9H8H2 851 aaKnown RBP14.61□□□□□ -0.07
USH1C-207ENST00000527720 MBNL1Q9NR56 388 aaKnown RBP14.61□□□□□ -0.07
USH1C-207ENST00000527720 ACSS1Q9NUB1 689 aaPredicted RBP14.61□□□□□ -0.07
USH1C-207ENST00000527720 GALNT8Q9NY28 637 aa14.61□□□□□ -0.07
USH1C-207ENST00000527720 TAS2R7Q9NYW3 318 aa14.61□□□□□ -0.07
USH1C-207ENST00000527720 RAB23Q9ULC3 237 aa14.61□□□□□ -0.07
USH1C-207ENST00000527720 ZBTB32Q9Y2Y4 487 aaPredicted RBP14.61□□□□□ -0.07
USH1C-207ENST00000527720 CHD9Q3L8U1 2897 aa14.61□□□□□ -0.07
USH1C-207ENST00000527720 TRBC2A0A5B9 178 aa14.61□□□□□ -0.07
USH1C-207ENST00000527720 C5orf58C9J3I9 102 aa14.61□□□□□ -0.07
USH1C-207ENST00000527720 CACNB4O00305 520 aaPredicted RBP14.61□□□□□ -0.07
USH1C-207ENST00000527720 TP53I13Q8NBR0 393 aaPredicted RBP14.61□□□□□ -0.07
USH1C-207ENST00000527720 RHOXF1Q8NHV9 184 aa14.61□□□□□ -0.07
USH1C-207ENST00000527720 PSMA8Q8TAA3 256 aa14.61□□□□□ -0.07
USH1C-207ENST00000527720 MYDGFQ969H8 173 aa14.61□□□□□ -0.07
USH1C-207ENST00000527720 PPP1R14BQ96C90 147 aa14.61□□□□□ -0.07
USH1C-207ENST00000527720 PLEKHA8Q96JA3 519 aa14.61□□□□□ -0.07
USH1C-207ENST00000527720 FERD3LQ96RJ6 166 aa14.61□□□□□ -0.07
USH1C-207ENST00000527720 LMAN2LQ9H0V9 348 aa14.61□□□□□ -0.07
USH1C-207ENST00000527720 SLAMF7Q9NQ25 335 aa14.61□□□□□ -0.07
USH1C-207ENST00000527720 LHX9Q9NQ69 397 aa14.61□□□□□ -0.07
USH1C-207ENST00000527720 KCND3Q9UK17 655 aa14.61□□□□□ -0.07
USH1C-207ENST00000527720 B3GNT3Q9Y2A9 372 aa14.61□□□□□ -0.07
USH1C-207ENST00000527720 RTCAO00442 366 aaKnown RBP14.6□□□□□ -0.07
USH1C-207ENST00000527720 CCNB2O95067 398 aa14.6□□□□□ -0.07
USH1C-207ENST00000527720 GADD45GO95257 159 aa14.6□□□□□ -0.07
USH1C-207ENST00000527720 FADS2O95864 444 aaKnown RBP14.6□□□□□ -0.07
USH1C-207ENST00000527720 ZNF12P17014 697 aa14.6□□□□□ -0.07
USH1C-207ENST00000527720 PSMB5P28074 263 aa14.6□□□□□ -0.07
USH1C-207ENST00000527720 RAB28P51157 221 aa14.6□□□□□ -0.07
USH1C-207ENST00000527720 CSNK1G2P78368 415 aa14.6□□□□□ -0.07
USH1C-207ENST00000527720 PRDX1Q06830 199 aaKnown RBP14.6□□□□□ -0.07
USH1C-207ENST00000527720 CCDC81Q6ZN84 652 aa14.6□□□□□ -0.07
USH1C-207ENST00000527720 Q6ZNX1 250 aa14.6□□□□□ -0.07
USH1C-207ENST00000527720 HDDC3Q8N4P3 179 aa14.6□□□□□ -0.07
USH1C-207ENST00000527720 LINC01555Q8NAE3 123 aa14.6□□□□□ -0.07
USH1C-207ENST00000527720 DRAXINQ8NBI3 349 aaPredicted RBP14.6□□□□□ -0.07
USH1C-207ENST00000527720 ST13P5Q8NFI4 369 aaPredicted RBP14.6□□□□□ -0.07
USH1C-207ENST00000527720 OR52J3Q8NH60 311 aa14.6□□□□□ -0.07
USH1C-207ENST00000527720 DNASE1L2Q92874 299 aa14.6□□□□□ -0.07
USH1C-207ENST00000527720 UBE2FQ969M7 185 aa14.6□□□□□ -0.07
USH1C-207ENST00000527720 CHFRQ96EP1 664 aa14.6□□□□□ -0.07
USH1C-207ENST00000527720 C12orf66Q96MD2 445 aa14.6□□□□□ -0.07
USH1C-207ENST00000527720 CDCA3Q99618 268 aaPredicted RBP14.6□□□□□ -0.07
USH1C-207ENST00000527720 TMEM121BQ9BXQ6 578 aaPredicted RBP14.6□□□□□ -0.07
USH1C-207ENST00000527720 TBCCD1Q9NVR7 557 aa14.6□□□□□ -0.07
USH1C-207ENST00000527720 PSORS1C1Q9UIG5 152 aa14.6□□□□□ -0.07
USH1C-207ENST00000527720 FEZF1A0PJY2 475 aa14.59□□□□□ -0.07
USH1C-207ENST00000527720 OR2A25A4D2G3 310 aa14.59□□□□□ -0.07
USH1C-207ENST00000527720 ANTXRLA6NF34 631 aa14.59□□□□□ -0.07
USH1C-207ENST00000527720 CLDN24A6NM45 220 aa14.59□□□□□ -0.07
USH1C-207ENST00000527720 GRXCR1A8MXD5 290 aa14.59□□□□□ -0.07
USH1C-207ENST00000527720 OR1F1O43749 312 aa14.59□□□□□ -0.07
USH1C-207ENST00000527720 DRD2P14416 443 aa14.59□□□□□ -0.07
USH1C-207ENST00000527720 PSMB9P28065 219 aa14.59□□□□□ -0.07
USH1C-207ENST00000527720 ALDH9A1P49189 494 aa14.59□□□□□ -0.07
USH1C-207ENST00000527720 AHSA2Q719I0 299 aa14.59□□□□□ -0.07
USH1C-207ENST00000527720 EGFL6Q8IUX8 553 aa14.59□□□□□ -0.07
USH1C-207ENST00000527720 HORMAD2Q8N7B1 307 aa14.59□□□□□ -0.07
USH1C-207ENST00000527720 SMYD1Q8NB12 490 aa14.59□□□□□ -0.07
USH1C-207ENST00000527720 SLC38A5Q8WUX1 472 aa14.59□□□□□ -0.07
USH1C-207ENST00000527720 APOBEC4Q8WW27 367 aaKnown RBP14.59□□□□□ -0.07
USH1C-207ENST00000527720 RASSF5Q8WWW0 418 aa14.59□□□□□ -0.07
USH1C-207ENST00000527720 ERLEC1Q96DZ1 483 aa14.59□□□□□ -0.07
USH1C-207ENST00000527720 VMP1Q96GC9 406 aa14.59□□□□□ -0.07
USH1C-207ENST00000527720 INSM2Q96T92 566 aaPredicted RBP14.59□□□□□ -0.07
USH1C-207ENST00000527720 NIPSNAP1Q9BPW8 284 aa14.59□□□□□ -0.07
USH1C-207ENST00000527720 MAPKAP1Q9BPZ7 522 aa14.59□□□□□ -0.07
USH1C-207ENST00000527720 COPS4Q9BT78 406 aa14.59□□□□□ -0.07
USH1C-207ENST00000527720 RLIMQ9NVW2 624 aa14.59□□□□□ -0.07
USH1C-207ENST00000527720 FKBP14Q9NWM8 211 aa14.59□□□□□ -0.07
USH1C-207ENST00000527720 ZSCAN32Q9NX65 697 aa14.59□□□□□ -0.07
USH1C-207ENST00000527720 EHD3Q9NZN3 535 aa14.59□□□□□ -0.07
USH1C-207ENST00000527720 SH3GLB1Q9Y371 365 aa14.59□□□□□ -0.07
USH1C-207ENST00000527720 OR1A2Q9Y585 309 aa14.59□□□□□ -0.07
USH1C-207ENST00000527720 PFDN1O60925 122 aa14.59□□□□□ -0.07
USH1C-207ENST00000527720 TFPTP0C1Z6 253 aa14.59□□□□□ -0.07
USH1C-207ENST00000527720 CBLP22681 906 aa14.59□□□□□ -0.07
USH1C-207ENST00000527720 MAGEA8P43361 318 aa14.59□□□□□ -0.07
USH1C-207ENST00000527720 RPS21P63220 83 aaKnown RBP14.59□□□□□ -0.07
USH1C-207ENST00000527720 OCA2Q04671 838 aa14.59□□□□□ -0.07
USH1C-207ENST00000527720 TMED1Q13445 227 aa14.59□□□□□ -0.07
USH1C-207ENST00000527720 MLF2Q15773 248 aaPredicted RBP14.59□□□□□ -0.07
USH1C-207ENST00000527720 TBCEQ15813 527 aaPredicted RBP14.59□□□□□ -0.07
USH1C-207ENST00000527720 TMEM35AQ53FP2 167 aa14.59□□□□□ -0.07
USH1C-207ENST00000527720 OR4C11Q6IEV9 310 aa14.59□□□□□ -0.07
USH1C-207ENST00000527720 DUS1LQ6P1R4 473 aaKnown RBP14.59□□□□□ -0.07
USH1C-207ENST00000527720 FAM92BQ6ZTR7 304 aa14.59□□□□□ -0.07
USH1C-207ENST00000527720 C6orf120Q7Z4R8 191 aa14.59□□□□□ -0.07
USH1C-207ENST00000527720 OR2L8Q8NGY9 312 aa14.59□□□□□ -0.07
USH1C-207ENST00000527720 PHF10Q8WUB8 498 aaKnown RBP14.59□□□□□ -0.07
USH1C-207ENST00000527720 CAMK1GQ96NX5 476 aa14.59□□□□□ -0.07
USH1C-207ENST00000527720 RHNO1Q9BSD3 238 aa14.59□□□□□ -0.07
USH1C-207ENST00000527720 SIRT3Q9NTG7 399 aaPredicted RBP14.59□□□□□ -0.07
USH1C-207ENST00000527720 ZFR2Q9UPR6 939 aaKnown RBP14.59□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms