RNA–Protein interactions for RNA: ENST00000527326.1

CD44-225, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 2

Gene CD44, Length 718 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-225ENST00000527326 C1orf196B1AJZ1 125 aa5.57□□□□□ -1.52
CD44-225ENST00000527326 H7C1Q1 480 aa5.57□□□□□ -1.52
CD44-225ENST00000527326 L7N2F9 121 aa5.57□□□□□ -1.52
CD44-225ENST00000527326 FXYD1O00168 92 aa5.57□□□□□ -1.52
CD44-225ENST00000527326 NR5A2O00482 541 aa5.57□□□□□ -1.52
CD44-225ENST00000527326 CASC3O15234 703 aaKnown RBP5.57□□□□□ -1.52
CD44-225ENST00000527326 PSMD3O43242 534 aa5.57□□□□□ -1.52
CD44-225ENST00000527326 SEC22BO75396 215 aa5.57□□□□□ -1.52
CD44-225ENST00000527326 WBP4O75554 376 aaKnown RBP5.57□□□□□ -1.52
CD44-225ENST00000527326 RECQL5O94762 991 aaPredicted RBP5.57□□□□□ -1.52
CD44-225ENST00000527326 ATG12O94817 140 aa5.57□□□□□ -1.52
CD44-225ENST00000527326 MATN4O95460 622 aa5.57□□□□□ -1.52
CD44-225ENST00000527326 PEX11BO96011 259 aa5.57□□□□□ -1.52
CD44-225ENST00000527326 WNT11O96014 354 aa5.57□□□□□ -1.52
CD44-225ENST00000527326 CFDP00746 253 aaPredicted RBP5.57□□□□□ -1.52
CD44-225ENST00000527326 SERPINA1P01009 418 aa5.57□□□□□ -1.52
CD44-225ENST00000527326 CST1P01037 141 aa5.57□□□□□ -1.52
CD44-225ENST00000527326 GCP02774 474 aa5.57□□□□□ -1.52
CD44-225ENST00000527326 LPLP06858 475 aa5.57□□□□□ -1.52
CD44-225ENST00000527326 HIST1H2AGP0C0S8 130 aaPredicted RBP5.57□□□□□ -1.52
CD44-225ENST00000527326 ARP10275 920 aa5.57□□□□□ -1.52
CD44-225ENST00000527326 SLC2A2P11168 524 aaPredicted RBP5.57□□□□□ -1.52
CD44-225ENST00000527326 PEPDP12955 493 aa5.57□□□□□ -1.52
CD44-225ENST00000527326 MUC1P15941 1255 aaPredicted RBP5.57□□□□□ -1.52
CD44-225ENST00000527326 DPEP1P16444 411 aa5.57□□□□□ -1.52
CD44-225ENST00000527326 SPINK2P20155 84 aa5.57□□□□□ -1.52
CD44-225ENST00000527326 HIST1H2ADP20671 130 aa5.57□□□□□ -1.52
CD44-225ENST00000527326 GPX3P22352 226 aa5.57□□□□□ -1.52
CD44-225ENST00000527326 KDELR1P24390 212 aa5.57□□□□□ -1.52
CD44-225ENST00000527326 IGFBP5P24593 272 aa5.57□□□□□ -1.52
CD44-225ENST00000527326 LCN1P31025 176 aa5.57□□□□□ -1.52
CD44-225ENST00000527326 SDHAP31040 664 aa5.57□□□□□ -1.52
CD44-225ENST00000527326 CCR7P32248 378 aa5.57□□□□□ -1.52
CD44-225ENST00000527326 PTGFRP43088 359 aa5.57□□□□□ -1.52
CD44-225ENST00000527326 CRATP43155 626 aa5.57□□□□□ -1.52
CD44-225ENST00000527326 KCNJ3P48549 501 aa5.57□□□□□ -1.52
CD44-225ENST00000527326 MRPL19P49406 292 aaKnown RBP5.57□□□□□ -1.52
CD44-225ENST00000527326 STAT5BP51692 787 aa5.57□□□□□ -1.52
CD44-225ENST00000527326 LIMK2P53671 638 aa5.57□□□□□ -1.52
CD44-225ENST00000527326 DNAJB13P59910 316 aa5.57□□□□□ -1.52
CD44-225ENST00000527326 C1QTNF8P60827 252 aa5.57□□□□□ -1.52
CD44-225ENST00000527326 PPP3R1P63098 170 aa5.57□□□□□ -1.52
CD44-225ENST00000527326 E2F1Q01094 437 aa5.57□□□□□ -1.52
CD44-225ENST00000527326 YWHAHQ04917 246 aaPredicted RBP5.57□□□□□ -1.52
CD44-225ENST00000527326 C2orf80Q0P641 193 aa5.57□□□□□ -1.52
CD44-225ENST00000527326 FOXO1Q12778 655 aa5.57□□□□□ -1.52
CD44-225ENST00000527326 SMAD4Q13485 552 aaKnown RBP5.57□□□□□ -1.52
CD44-225ENST00000527326 PWP1Q13610 501 aa5.57□□□□□ -1.52
CD44-225ENST00000527326 GK2Q14410 553 aaPredicted RBP5.57□□□□□ -1.52
CD44-225ENST00000527326 KRT33BQ14525 404 aa5.57□□□□□ -1.52
CD44-225ENST00000527326 HNF4GQ14541 408 aa5.57□□□□□ -1.52
CD44-225ENST00000527326 EIF4HQ15056 248 aaKnown RBP5.57□□□□□ -1.52
CD44-225ENST00000527326 PTPN20Q4JDL3 420 aa5.57□□□□□ -1.52
CD44-225ENST00000527326 ATP13A4Q4VNC1 1196 aa5.57□□□□□ -1.52
CD44-225ENST00000527326 SBK1Q52WX2 424 aa5.57□□□□□ -1.52
CD44-225ENST00000527326 C9orf152Q5JTZ5 239 aa5.57□□□□□ -1.52
CD44-225ENST00000527326 TMEM31Q5JXX7 168 aa5.57□□□□□ -1.52
CD44-225ENST00000527326 ACER2Q5QJU3 275 aa5.57□□□□□ -1.52
CD44-225ENST00000527326 NOL9Q5SY16 702 aaKnown RBP5.57□□□□□ -1.52
CD44-225ENST00000527326 CELF3Q5SZQ8 465 aaKnown RBP5.57□□□□□ -1.52
CD44-225ENST00000527326 SPOUT1Q5T280 376 aaKnown RBP5.57□□□□□ -1.52
CD44-225ENST00000527326 HECTD3Q5T447 861 aa5.57□□□□□ -1.52
CD44-225ENST00000527326 GPRC6AQ5T6X5 926 aa5.57□□□□□ -1.52
CD44-225ENST00000527326 PRAMEF13Q5VWM6 474 aa5.57□□□□□ -1.52
CD44-225ENST00000527326 HIST2H2AA3Q6FI13 130 aa5.57□□□□□ -1.52
CD44-225ENST00000527326 RAET1GQ6H3X3 334 aa5.57□□□□□ -1.52
CD44-225ENST00000527326 SWSAP1Q6NVH7 229 aa5.57□□□□□ -1.52
CD44-225ENST00000527326 MOXD1Q6UVY6 613 aa5.57□□□□□ -1.52
CD44-225ENST00000527326 MOB2Q70IA6 237 aa5.57□□□□□ -1.52
CD44-225ENST00000527326 DTX1Q86Y01 620 aa5.57□□□□□ -1.52
CD44-225ENST00000527326 ADGRF3Q8IZF5 1079 aa5.57□□□□□ -1.52
CD44-225ENST00000527326 THEM5Q8N1Q8 247 aa5.57□□□□□ -1.52
CD44-225ENST00000527326 MIER2Q8N344 545 aa5.57□□□□□ -1.52
CD44-225ENST00000527326 DNAJC22Q8N4W6 341 aa5.57□□□□□ -1.52
CD44-225ENST00000527326 MYCT1Q8N699 235 aa5.57□□□□□ -1.52
CD44-225ENST00000527326 CLDN22Q8N7P3 220 aa5.57□□□□□ -1.52
CD44-225ENST00000527326 EFHBQ8N7U6 833 aa5.57□□□□□ -1.52
CD44-225ENST00000527326 IPMKQ8NFU5 416 aa5.57□□□□□ -1.52
CD44-225ENST00000527326 RDM1Q8NG50 284 aa5.57□□□□□ -1.52
CD44-225ENST00000527326 OR2L5Q8NG80 312 aa5.57□□□□□ -1.52
CD44-225ENST00000527326 OR4F6Q8NGB9 312 aa5.57□□□□□ -1.52
CD44-225ENST00000527326 OR6B3Q8NGW1 331 aa5.57□□□□□ -1.52
CD44-225ENST00000527326 PHOSPHO1Q8TCT1 267 aa5.57□□□□□ -1.52
CD44-225ENST00000527326 ZNF675Q8TD23 568 aa5.57□□□□□ -1.52
CD44-225ENST00000527326 AP3S1Q92572 193 aa5.57□□□□□ -1.52
CD44-225ENST00000527326 RFKQ969G6 155 aa5.57□□□□□ -1.52
CD44-225ENST00000527326 SCRN2Q96FV2 425 aa5.57□□□□□ -1.52
CD44-225ENST00000527326 OTUB1Q96FW1 271 aaPredicted RBP5.57□□□□□ -1.52
CD44-225ENST00000527326 SCMH1Q96GD3 660 aa5.57□□□□□ -1.52
CD44-225ENST00000527326 ZBED3Q96IU2 234 aaPredicted RBP5.57□□□□□ -1.52
CD44-225ENST00000527326 MSLNLQ96KJ4 702 aa5.57□□□□□ -1.52
CD44-225ENST00000527326 HIST1H2AHQ96KK5 128 aa5.57□□□□□ -1.52
CD44-225ENST00000527326 RHOVQ96L33 236 aa5.57□□□□□ -1.52
CD44-225ENST00000527326 CCNL2Q96S94 520 aaPredicted RBP5.57□□□□□ -1.52
CD44-225ENST00000527326 PPP1R16BQ96T49 567 aa5.57□□□□□ -1.52
CD44-225ENST00000527326 PITX2Q99697 317 aa5.57□□□□□ -1.52
CD44-225ENST00000527326 RBBP8Q99708 897 aa5.57□□□□□ -1.52
CD44-225ENST00000527326 HIST1H2AJQ99878 128 aa5.57□□□□□ -1.52
CD44-225ENST00000527326 KRTAP4-12Q9BQ66 201 aa5.57□□□□□ -1.52
CD44-225ENST00000527326 CMSS1Q9BQ75 279 aaKnown RBP5.57□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms