RNA–Protein interactions for RNA: ENST00000527299.1

CLNS1A-209, Transcript of chloride nucleotide-sensitive channel 1A, humanhuman

TSL 2

Gene CLNS1A, Length 387 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLNS1A-209ENST00000527299 FAM71F1Q96KD3 344 aaPredicted RBP3.55□□□□□ -1.84
CLNS1A-209ENST00000527299 SGCZQ96LD1 299 aa3.55□□□□□ -1.84
CLNS1A-209ENST00000527299 ADAD1Q96M93 576 aaKnown RBP3.55□□□□□ -1.84
CLNS1A-209ENST00000527299 PIGSQ96S52 555 aa3.55□□□□□ -1.84
CLNS1A-209ENST00000527299 CSF3RQ99062 836 aa3.55□□□□□ -1.84
CLNS1A-209ENST00000527299 PFDN5Q99471 154 aa3.55□□□□□ -1.84
CLNS1A-209ENST00000527299 CDCA3Q99618 268 aaPredicted RBP3.55□□□□□ -1.84
CLNS1A-209ENST00000527299 PKP2Q99959 881 aa3.55□□□□□ -1.84
CLNS1A-209ENST00000527299 FAM118BQ9BPY3 351 aa3.55□□□□□ -1.84
CLNS1A-209ENST00000527299 NUDT16L1Q9BRJ7 211 aaKnown RBP3.55□□□□□ -1.84
CLNS1A-209ENST00000527299 RTKNQ9BST9 563 aa3.55□□□□□ -1.84
CLNS1A-209ENST00000527299 CCDC32Q9BV29 185 aa3.55□□□□□ -1.84
CLNS1A-209ENST00000527299 HDHD5Q9BXW7 423 aa3.55□□□□□ -1.84
CLNS1A-209ENST00000527299 TRIM9Q9C026 710 aa3.55□□□□□ -1.84
CLNS1A-209ENST00000527299 DNTTIP1Q9H147 329 aa3.55□□□□□ -1.84
CLNS1A-209ENST00000527299 C2orf40Q9H1Z8 148 aa3.55□□□□□ -1.84
CLNS1A-209ENST00000527299 SLC26A1Q9H2B4 701 aa3.55□□□□□ -1.84
CLNS1A-209ENST00000527299 DSN1Q9H410 356 aa3.55□□□□□ -1.84
CLNS1A-209ENST00000527299 GSTO2Q9H4Y5 243 aa3.55□□□□□ -1.84
CLNS1A-209ENST00000527299 ANKRD19PQ9H560 264 aa3.55□□□□□ -1.84
CLNS1A-209ENST00000527299 KAT8Q9H7Z6 458 aaKnown RBP3.55□□□□□ -1.84
CLNS1A-209ENST00000527299 MANSC1Q9H8J5 431 aa3.55□□□□□ -1.84
CLNS1A-209ENST00000527299 KANSL2Q9H9L4 492 aa3.55□□□□□ -1.84
CLNS1A-209ENST00000527299 MAGEF1Q9HAY2 307 aa3.55□□□□□ -1.84
CLNS1A-209ENST00000527299 EMC7Q9NPA0 242 aa3.55□□□□□ -1.84
CLNS1A-209ENST00000527299 ASCL3Q9NQ33 180 aa3.55□□□□□ -1.84
CLNS1A-209ENST00000527299 PRMT8Q9NR22 394 aaPredicted RBP3.55□□□□□ -1.84
CLNS1A-209ENST00000527299 POLE4Q9NR33 117 aa3.55□□□□□ -1.84
CLNS1A-209ENST00000527299 ABCB10Q9NRK6 738 aa3.55□□□□□ -1.84
CLNS1A-209ENST00000527299 SERINC1Q9NRX5 453 aa3.55□□□□□ -1.84
CLNS1A-209ENST00000527299 NRBP2Q9NSY0 501 aa3.55□□□□□ -1.84
CLNS1A-209ENST00000527299 SDHAF2Q9NX18 166 aa3.55□□□□□ -1.84
CLNS1A-209ENST00000527299 ELOVL2Q9NXB9 296 aa3.55□□□□□ -1.84
CLNS1A-209ENST00000527299 SPHK1Q9NYA1 384 aa3.55□□□□□ -1.84
CLNS1A-209ENST00000527299 NDUFAF4Q9P032 175 aa3.55□□□□□ -1.84
CLNS1A-209ENST00000527299 XPR1Q9UBH6 696 aa3.55□□□□□ -1.84
CLNS1A-209ENST00000527299 MLXQ9UH92 298 aa3.55□□□□□ -1.84
CLNS1A-209ENST00000527299 IL19Q9UHD0 177 aa3.55□□□□□ -1.84
CLNS1A-209ENST00000527299 DCDC2Q9UHG0 476 aa3.55□□□□□ -1.84
CLNS1A-209ENST00000527299 ZNF639Q9UID6 485 aa3.55□□□□□ -1.84
CLNS1A-209ENST00000527299 KIF25Q9UIL4 384 aa3.55□□□□□ -1.84
CLNS1A-209ENST00000527299 AJAP1Q9UKB5 411 aaPredicted RBP3.55□□□□□ -1.84
CLNS1A-209ENST00000527299 SARDHQ9UL12 918 aa3.55□□□□□ -1.84
CLNS1A-209ENST00000527299 CA14Q9ULX7 337 aa3.55□□□□□ -1.84
CLNS1A-209ENST00000527299 ABCG2Q9UNQ0 655 aa3.55□□□□□ -1.84
CLNS1A-209ENST00000527299 PCDHGB2Q9Y5G2 931 aa3.55□□□□□ -1.84
CLNS1A-209ENST00000527299 SRPRBQ9Y5M8 271 aaKnown RBP3.55□□□□□ -1.84
CLNS1A-209ENST00000527299 FER1L6Q2WGJ9 1857 aa3.55□□□□□ -1.84
CLNS1A-209ENST00000527299 FAM208AQ9UK61 1670 aaKnown RBP3.55□□□□□ -1.84
CLNS1A-209ENST00000527299 RIC1Q4ADV7 1423 aa3.54□□□□□ -1.84
CLNS1A-209ENST00000527299 EDC4Q6P2E9 1401 aaKnown RBP3.54□□□□□ -1.84
CLNS1A-209ENST00000527299 PALLDQ8WX93 1383 aa3.54□□□□□ -1.84
CLNS1A-209ENST00000527299 FRMPD2Q68DX3 1309 aaPredicted RBP3.54□□□□□ -1.84
CLNS1A-209ENST00000527299 TEX13CA0A0J9YWL9 993 aa3.54□□□□□ -1.84
CLNS1A-209ENST00000527299 LOC100506127A0A0U1RQW1 187 aa3.54□□□□□ -1.84
CLNS1A-209ENST00000527299 A0A1W2PPC1 479 aa3.54□□□□□ -1.84
CLNS1A-209ENST00000527299 GNG14A0A1W2PPG7 69 aa3.54□□□□□ -1.84
CLNS1A-209ENST00000527299 CIB4A0PJX0 185 aa3.54□□□□□ -1.84
CLNS1A-209ENST00000527299 SLC22A23A1A5C7 686 aa3.54□□□□□ -1.84
CLNS1A-209ENST00000527299 MYMKA6NI61 221 aa3.54□□□□□ -1.84
CLNS1A-209ENST00000527299 AGAP5A6NIR3 686 aa3.54□□□□□ -1.84
CLNS1A-209ENST00000527299 VSTM5A8MXK1 200 aa3.54□□□□□ -1.84
CLNS1A-209ENST00000527299 A8MXK9 166 aa3.54□□□□□ -1.84
CLNS1A-209ENST00000527299 POC1B-GALNT4F8VUJ3 575 aa3.54□□□□□ -1.84
CLNS1A-209ENST00000527299 M0R3G1 203 aa3.54□□□□□ -1.84
CLNS1A-209ENST00000527299 DDX39AO00148 427 aaKnown RBP3.54□□□□□ -1.84
CLNS1A-209ENST00000527299 GRM8O00222 908 aa3.54□□□□□ -1.84
CLNS1A-209ENST00000527299 KPNA3O00505 521 aaPredicted RBP3.54□□□□□ -1.84
CLNS1A-209ENST00000527299 COPEO14579 308 aa3.54□□□□□ -1.84
CLNS1A-209ENST00000527299 CD3EAPO15446 510 aaKnown RBP3.54□□□□□ -1.84
CLNS1A-209ENST00000527299 PRKYO43930 277 aa3.54□□□□□ -1.84
CLNS1A-209ENST00000527299 TSPAN2O60636 221 aa3.54□□□□□ -1.84
CLNS1A-209ENST00000527299 KERAO60938 352 aa3.54□□□□□ -1.84
CLNS1A-209ENST00000527299 VPS4BO75351 444 aa3.54□□□□□ -1.84
CLNS1A-209ENST00000527299 TAF5LO75529 589 aa3.54□□□□□ -1.84
CLNS1A-209ENST00000527299 MED6O75586 246 aa3.54□□□□□ -1.84
CLNS1A-209ENST00000527299 DDNO94850 711 aaPredicted RBP3.54□□□□□ -1.84
CLNS1A-209ENST00000527299 PAK4O96013 591 aaPredicted RBP3.54□□□□□ -1.84
CLNS1A-209ENST00000527299 F9P00740 461 aa3.54□□□□□ -1.84
CLNS1A-209ENST00000527299 AHSGP02765 367 aa3.54□□□□□ -1.84
CLNS1A-209ENST00000527299 DNTTP04053 509 aa3.54□□□□□ -1.84
CLNS1A-209ENST00000527299 ALPPP05187 535 aa3.54□□□□□ -1.84
CLNS1A-209ENST00000527299 TPOP07202 933 aa3.54□□□□□ -1.84
CLNS1A-209ENST00000527299 HCKP08631 526 aa3.54□□□□□ -1.84
CLNS1A-209ENST00000527299 DHRS4L1P0CG22 281 aa3.54□□□□□ -1.84
CLNS1A-209ENST00000527299 NR2F1P10589 423 aa3.54□□□□□ -1.84
CLNS1A-209ENST00000527299 MYL2P10916 166 aa3.54□□□□□ -1.84
CLNS1A-209ENST00000527299 CKMT1AP12532 417 aa3.54□□□□□ -1.84
CLNS1A-209ENST00000527299 TGM2P21980 687 aa3.54□□□□□ -1.84
CLNS1A-209ENST00000527299 GALP22466 123 aa3.54□□□□□ -1.84
CLNS1A-209ENST00000527299 CA4P22748 312 aa3.54□□□□□ -1.84
CLNS1A-209ENST00000527299 GLRA2P23416 452 aa3.54□□□□□ -1.84
CLNS1A-209ENST00000527299 ATP5F1P24539 256 aaPredicted RBP3.54□□□□□ -1.84
CLNS1A-209ENST00000527299 ATP5A1P25705 553 aaKnown RBP3.54□□□□□ -1.84
CLNS1A-209ENST00000527299 MAPK3P27361 379 aaPredicted RBP3.54□□□□□ -1.84
CLNS1A-209ENST00000527299 EPHA3P29320 983 aa3.54□□□□□ -1.84
CLNS1A-209ENST00000527299 TACR3P29371 465 aa3.54□□□□□ -1.84
CLNS1A-209ENST00000527299 MPGP29372 298 aa3.54□□□□□ -1.84
CLNS1A-209ENST00000527299 CCR1P32246 355 aa3.54□□□□□ -1.84
CLNS1A-209ENST00000527299 CCR7P32248 378 aa3.54□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms