RNA–Protein interactions for RNA: ENST00000526704.6

LINC01001-201, Transcript of long intergenic non-protein coding RNA 1001, humanhuman

TSL 5 BASIC

Gene LINC01001, Length 2,553 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01001-201ENST00000526704 LRIT3Q3SXY7 679 aa11.12□□□□□ -0.63
LINC01001-201ENST00000526704 RPS26P11Q5JNZ5 115 aaPredicted RBP11.12□□□□□ -0.63
LINC01001-201ENST00000526704 DEPDC1Q5TB30 811 aa11.12□□□□□ -0.63
LINC01001-201ENST00000526704 THOC7Q6I9Y2 204 aaKnown RBP11.12□□□□□ -0.63
LINC01001-201ENST00000526704 FAM180BQ6P0A1 224 aa11.12□□□□□ -0.63
LINC01001-201ENST00000526704 LILRA6Q6PI73 481 aa11.12□□□□□ -0.63
LINC01001-201ENST00000526704 NXPE4Q6UWF7 544 aa11.12□□□□□ -0.63
LINC01001-201ENST00000526704 PTCHD4Q6ZW05 846 aa11.12□□□□□ -0.63
LINC01001-201ENST00000526704 PARS2Q7L3T8 475 aaKnown RBP11.12□□□□□ -0.63
LINC01001-201ENST00000526704 KIAA0907Q7Z7F0 614 aaPredicted RBP11.12□□□□□ -0.63
LINC01001-201ENST00000526704 CFAP206Q8IYR0 622 aa11.12□□□□□ -0.63
LINC01001-201ENST00000526704 SDHCQ99643 169 aaPredicted RBP11.12□□□□□ -0.63
LINC01001-201ENST00000526704 RSPO3Q9BXY4 272 aaPredicted RBP11.12□□□□□ -0.63
LINC01001-201ENST00000526704 SLC6A16Q9GZN6 736 aa11.12□□□□□ -0.63
LINC01001-201ENST00000526704 SPHK2Q9NRA0 654 aa11.12□□□□□ -0.63
LINC01001-201ENST00000526704 CREBZFQ9NS37 354 aa11.12□□□□□ -0.63
LINC01001-201ENST00000526704 ENOPH1Q9UHY7 261 aa11.12□□□□□ -0.63
LINC01001-201ENST00000526704 POU2F3Q9UKI9 436 aa11.12□□□□□ -0.63
LINC01001-201ENST00000526704 OGDHLQ9ULD0 1010 aa11.12□□□□□ -0.63
LINC01001-201ENST00000526704 CKAP5Q14008 2032 aa11.12□□□□□ -0.63
LINC01001-201ENST00000526704 TRBV4-1A0A0J9YWV2 114 aa11.12□□□□□ -0.63
LINC01001-201ENST00000526704 KMOO15229 486 aa11.12□□□□□ -0.63
LINC01001-201ENST00000526704 MED26O95402 600 aa11.12□□□□□ -0.63
LINC01001-201ENST00000526704 IRS1P35568 1242 aa11.12□□□□□ -0.63
LINC01001-201ENST00000526704 PIK3CBP42338 1070 aa11.12□□□□□ -0.63
LINC01001-201ENST00000526704 TAP2Q03519 686 aa11.12□□□□□ -0.63
LINC01001-201ENST00000526704 BCL7AQ4VC05 210 aa11.12□□□□□ -0.63
LINC01001-201ENST00000526704 LY6G5CQ5SRR4 150 aa11.12□□□□□ -0.63
LINC01001-201ENST00000526704 PLAG1Q6DJT9 500 aa11.12□□□□□ -0.63
LINC01001-201ENST00000526704 FRMPD2BQ6IN97 320 aa11.12□□□□□ -0.63
LINC01001-201ENST00000526704 CCDC190Q86UF4 302 aa11.12□□□□□ -0.63
LINC01001-201ENST00000526704 SLC44A2Q8IWA5 706 aaPredicted RBP11.12□□□□□ -0.63
LINC01001-201ENST00000526704 CLIP4Q8N3C7 705 aa11.12□□□□□ -0.63
LINC01001-201ENST00000526704 ZNF366Q8N895 744 aa11.12□□□□□ -0.63
LINC01001-201ENST00000526704 OR9A1PQ8NGU1 263 aa11.12□□□□□ -0.63
LINC01001-201ENST00000526704 WDR36Q8NI36 951 aaKnown RBP11.12□□□□□ -0.63
LINC01001-201ENST00000526704 EFHD2Q96C19 240 aaPredicted RBP11.12□□□□□ -0.63
LINC01001-201ENST00000526704 OPALINQ96PE5 141 aa11.12□□□□□ -0.63
LINC01001-201ENST00000526704 C11orf16Q9NQ32 467 aa11.12□□□□□ -0.63
LINC01001-201ENST00000526704 CLN6Q9NWW5 311 aa11.12□□□□□ -0.63
LINC01001-201ENST00000526704 A8MU76 341 aa11.11□□□□□ -0.63
LINC01001-201ENST00000526704 CCRL2O00421 344 aa11.11□□□□□ -0.63
LINC01001-201ENST00000526704 SPINT1O43278 529 aa11.11□□□□□ -0.63
LINC01001-201ENST00000526704 MPZL2O60487 215 aa11.11□□□□□ -0.63
LINC01001-201ENST00000526704 GPX5O75715 221 aa11.11□□□□□ -0.63
LINC01001-201ENST00000526704 OXSR1O95747 527 aaPredicted RBP11.11□□□□□ -0.63
LINC01001-201ENST00000526704 MYCP01106 439 aaPredicted RBP11.11□□□□□ -0.63
LINC01001-201ENST00000526704 PIPP12273 146 aaPredicted RBP11.11□□□□□ -0.63
LINC01001-201ENST00000526704 UQCRC2P22695 453 aa11.11□□□□□ -0.63
LINC01001-201ENST00000526704 OPRD1P41143 372 aa11.11□□□□□ -0.63
LINC01001-201ENST00000526704 RPS26P62854 115 aaKnown RBP11.11□□□□□ -0.63
LINC01001-201ENST00000526704 LEXMQ3ZCV2 418 aa11.11□□□□□ -0.63
LINC01001-201ENST00000526704 HIST2H2AA3Q6FI13 130 aa11.11□□□□□ -0.63
LINC01001-201ENST00000526704 IKBIPQ70UQ0 350 aa11.11□□□□□ -0.63
LINC01001-201ENST00000526704 TAGAPQ8N103 731 aa11.11□□□□□ -0.63
LINC01001-201ENST00000526704 DTD2Q96FN9 168 aa11.11□□□□□ -0.63
LINC01001-201ENST00000526704 EPHX3Q9H6B9 360 aa11.11□□□□□ -0.63
LINC01001-201ENST00000526704 SLC25A19Q9HC21 320 aa11.11□□□□□ -0.63
LINC01001-201ENST00000526704 FZD3Q9NPG1 666 aa11.11□□□□□ -0.63
LINC01001-201ENST00000526704 TRPV5Q9NQA5 729 aa11.11□□□□□ -0.63
LINC01001-201ENST00000526704 HEATR5BQ9P2D3 2071 aa11.11□□□□□ -0.63
LINC01001-201ENST00000526704 DKK3Q9UBP4 350 aa11.11□□□□□ -0.63
LINC01001-201ENST00000526704 REV1Q9UBZ9 1251 aa11.11□□□□□ -0.63
LINC01001-201ENST00000526704 CFL2Q9Y281 166 aa11.11□□□□□ -0.63
LINC01001-201ENST00000526704 LSM2Q9Y333 95 aaKnown RBP11.11□□□□□ -0.63
LINC01001-201ENST00000526704 DENND4AQ7Z401 1863 aa11.11□□□□□ -0.63
LINC01001-201ENST00000526704 K7ESM1 405 aa11.11□□□□□ -0.63
LINC01001-201ENST00000526704 SSX4O60224 188 aa11.11□□□□□ -0.63
LINC01001-201ENST00000526704 SEMA7AO75326 666 aa11.11□□□□□ -0.63
LINC01001-201ENST00000526704 ENTPD6O75354 484 aa11.11□□□□□ -0.63
LINC01001-201ENST00000526704 SYN1P17600 705 aa11.11□□□□□ -0.63
LINC01001-201ENST00000526704 POU1F1P28069 291 aa11.11□□□□□ -0.63
LINC01001-201ENST00000526704 SOX6P35712 828 aa11.11□□□□□ -0.63
LINC01001-201ENST00000526704 CASP3P42574 277 aa11.11□□□□□ -0.63
LINC01001-201ENST00000526704 SEC23BQ15437 767 aa11.11□□□□□ -0.63
LINC01001-201ENST00000526704 TEAD2Q15562 447 aa11.11□□□□□ -0.63
LINC01001-201ENST00000526704 CLPPQ16740 277 aaPredicted RBP11.11□□□□□ -0.63
LINC01001-201ENST00000526704 TIMM50Q3ZCQ8 353 aa11.11□□□□□ -0.63
LINC01001-201ENST00000526704 REEP3Q6NUK4 255 aa11.11□□□□□ -0.63
LINC01001-201ENST00000526704 UNC5DQ6UXZ4 953 aa11.11□□□□□ -0.63
LINC01001-201ENST00000526704 CCDC149Q6ZUS6 474 aa11.11□□□□□ -0.63
LINC01001-201ENST00000526704 GDPD3Q7L5L3 318 aa11.11□□□□□ -0.63
LINC01001-201ENST00000526704 ANKRD33Q7Z3H0 272 aa11.11□□□□□ -0.63
LINC01001-201ENST00000526704 NANOGNBQ7Z5D8 188 aa11.11□□□□□ -0.63
LINC01001-201ENST00000526704 TRAPPC5Q8IUR0 188 aa11.11□□□□□ -0.63
LINC01001-201ENST00000526704 SLC30A8Q8IWU4 369 aa11.11□□□□□ -0.63
LINC01001-201ENST00000526704 NRSN1Q8IZ57 195 aa11.11□□□□□ -0.63
LINC01001-201ENST00000526704 KREMEN2Q8NCW0 462 aa11.11□□□□□ -0.63
LINC01001-201ENST00000526704 FAM46DQ8NEK8 389 aa11.11□□□□□ -0.63
LINC01001-201ENST00000526704 GPR32P1Q8NGA4 272 aa11.11□□□□□ -0.63
LINC01001-201ENST00000526704 COQ10AQ96MF6 247 aa11.11□□□□□ -0.63
LINC01001-201ENST00000526704 OR2AG1Q9H205 316 aa11.11□□□□□ -0.63
LINC01001-201ENST00000526704 SLAMF7Q9NQ25 335 aa11.11□□□□□ -0.63
LINC01001-201ENST00000526704 CCDC177Q9NQR7 707 aaPredicted RBP11.11□□□□□ -0.63
LINC01001-201ENST00000526704 ITM2CQ9NQX7 267 aa11.11□□□□□ -0.63
LINC01001-201ENST00000526704 ICKQ9UPZ9 632 aa11.11□□□□□ -0.63
LINC01001-201ENST00000526704 ATP11BQ9Y2G3 1177 aa11.11□□□□□ -0.63
LINC01001-201ENST00000526704 SNX8Q9Y5X2 465 aa11.11□□□□□ -0.63
LINC01001-201ENST00000526704 TPD52L2O43399 206 aaKnown RBP11.1□□□□□ -0.63
LINC01001-201ENST00000526704 MOSPD3O75425 235 aa11.1□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 46.8 ms