RNA–Protein interactions for RNA: ENST00000526669.6

CD44-224, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 5 BASIC

Gene CD44, Length 870 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-224ENST00000526669 LYRM4Q9HD34 91 aa12.94□□□□□ -0.34
CD44-224ENST00000526669 MKKSQ9NPJ1 570 aaPredicted RBP12.94□□□□□ -0.34
CD44-224ENST00000526669 TCF7L2Q9NQB0 619 aa12.94□□□□□ -0.34
CD44-224ENST00000526669 KCMF1Q9P0J7 381 aa12.94□□□□□ -0.34
CD44-224ENST00000526669 C5AR2Q9P296 337 aa12.94□□□□□ -0.34
CD44-224ENST00000526669 ZNF282Q9UDV7 671 aaPredicted RBP12.94□□□□□ -0.34
CD44-224ENST00000526669 PHF11Q9UIL8 331 aa12.94□□□□□ -0.34
CD44-224ENST00000526669 PCSK5Q92824 1860 aa12.93□□□□□ -0.34
CD44-224ENST00000526669 A0A1W2PR48 441 aa12.93□□□□□ -0.34
CD44-224ENST00000526669 WASHC1A8K0Z3 465 aa12.93□□□□□ -0.34
CD44-224ENST00000526669 IQCJ-SCHIP1C9J366 451 aaPredicted RBP12.93□□□□□ -0.34
CD44-224ENST00000526669 AKAP10O43572 662 aa12.93□□□□□ -0.34
CD44-224ENST00000526669 BMP10O95393 424 aa12.93□□□□□ -0.34
CD44-224ENST00000526669 FHP07954 510 aa12.93□□□□□ -0.34
CD44-224ENST00000526669 ZGLP1P0C6A0 271 aa12.93□□□□□ -0.34
CD44-224ENST00000526669 NR2F6P10588 404 aa12.93□□□□□ -0.34
CD44-224ENST00000526669 MAPK1P28482 360 aa12.93□□□□□ -0.34
CD44-224ENST00000526669 ARFIP2P53365 341 aa12.93□□□□□ -0.34
CD44-224ENST00000526669 PCBP4P57723 403 aaKnown RBP12.93□□□□□ -0.34
CD44-224ENST00000526669 ID2Q02363 134 aa12.93□□□□□ -0.34
CD44-224ENST00000526669 EMX2Q04743 252 aa12.93□□□□□ -0.34
CD44-224ENST00000526669 C2orf80Q0P641 193 aa12.93□□□□□ -0.34
CD44-224ENST00000526669 MAD2L1Q13257 205 aaPredicted RBP12.93□□□□□ -0.34
CD44-224ENST00000526669 NCF4Q15080 339 aa12.93□□□□□ -0.34
CD44-224ENST00000526669 MINDY4Q4G0A6 757 aa12.93□□□□□ -0.34
CD44-224ENST00000526669 FAAH2Q6GMR7 532 aa12.93□□□□□ -0.34
CD44-224ENST00000526669 MRPL14Q6P1L8 145 aaKnown RBP12.93□□□□□ -0.34
CD44-224ENST00000526669 GALNT18Q6P9A2 607 aa12.93□□□□□ -0.34
CD44-224ENST00000526669 ZNF517Q6ZMY9 492 aaPredicted RBP12.93□□□□□ -0.34
CD44-224ENST00000526669 CLNKQ7Z7G1 428 aa12.93□□□□□ -0.34
CD44-224ENST00000526669 CPLX4Q7Z7G2 160 aa12.93□□□□□ -0.34
CD44-224ENST00000526669 LAPTM4BQ86VI4 370 aa12.93□□□□□ -0.34
CD44-224ENST00000526669 CEP70Q8NHQ1 597 aa12.93□□□□□ -0.34
CD44-224ENST00000526669 ACTRT2Q8TDY3 377 aa12.93□□□□□ -0.34
CD44-224ENST00000526669 NUDT8Q8WV74 236 aa12.93□□□□□ -0.34
CD44-224ENST00000526669 C10orf82Q8WW14 230 aa12.93□□□□□ -0.34
CD44-224ENST00000526669 FKBP10Q96AY3 582 aa12.93□□□□□ -0.34
CD44-224ENST00000526669 TBC1D20Q96BZ9 403 aa12.93□□□□□ -0.34
CD44-224ENST00000526669 MIEF2Q96C03 454 aa12.93□□□□□ -0.34
CD44-224ENST00000526669 RILPQ96NA2 401 aa12.93□□□□□ -0.34
CD44-224ENST00000526669 CCDC86Q9H6F5 360 aaKnown RBP12.93□□□□□ -0.34
CD44-224ENST00000526669 SIRT5Q9NXA8 310 aa12.93□□□□□ -0.34
CD44-224ENST00000526669 HEY2Q9UBP5 337 aa12.93□□□□□ -0.34
CD44-224ENST00000526669 ACSL6Q9UKU0 697 aa12.93□□□□□ -0.34
CD44-224ENST00000526669 EIF3LQ9Y262 564 aaKnown RBP12.93□□□□□ -0.34
CD44-224ENST00000526669 TMED5Q9Y3A6 229 aa12.93□□□□□ -0.34
CD44-224ENST00000526669 PTRH2Q9Y3E5 179 aaKnown RBP12.93□□□□□ -0.34
CD44-224ENST00000526669 SPACA6W5XKT8 324 aa12.93□□□□□ -0.34
CD44-224ENST00000526669 C1QTNF9BB2RNN3 333 aa12.92□□□□□ -0.34
CD44-224ENST00000526669 PGRMC2O15173 223 aa12.92□□□□□ -0.34
CD44-224ENST00000526669 PROM1O43490 865 aa12.92□□□□□ -0.34
CD44-224ENST00000526669 ONECUT2O95948 504 aa12.92□□□□□ -0.34
CD44-224ENST00000526669 C1QTNF9P0C862 333 aa12.92□□□□□ -0.34
CD44-224ENST00000526669 G6PDP11413 515 aa12.92□□□□□ -0.34
CD44-224ENST00000526669 BUD31P41223 144 aaPredicted RBP12.92□□□□□ -0.34
CD44-224ENST00000526669 EFNA3P52797 238 aa12.92□□□□□ -0.34
CD44-224ENST00000526669 BTG2P78543 158 aa12.92□□□□□ -0.34
CD44-224ENST00000526669 KLC1Q07866 573 aa12.92□□□□□ -0.34
CD44-224ENST00000526669 CLN3Q13286 438 aa12.92□□□□□ -0.34
CD44-224ENST00000526669 PTGR1Q14914 329 aa12.92□□□□□ -0.34
CD44-224ENST00000526669 NDUFAF5Q5TEU4 345 aa12.92□□□□□ -0.34
CD44-224ENST00000526669 ERMP1Q7Z2K6 904 aa12.92□□□□□ -0.34
CD44-224ENST00000526669 SPATA21Q7Z572 469 aa12.92□□□□□ -0.34
CD44-224ENST00000526669 OR4N5Q8IXE1 308 aa12.92□□□□□ -0.34
CD44-224ENST00000526669 KCNE4Q8WWG9 221 aa12.92□□□□□ -0.34
CD44-224ENST00000526669 FGF11Q92914 225 aa12.92□□□□□ -0.34
CD44-224ENST00000526669 TSLPQ969D9 159 aa12.92□□□□□ -0.34
CD44-224ENST00000526669 METTL2AQ96IZ6 378 aaKnown RBP12.92□□□□□ -0.34
CD44-224ENST00000526669 SPSB2Q99619 263 aa12.92□□□□□ -0.34
CD44-224ENST00000526669 CCDC28BQ9BUN5 200 aa12.92□□□□□ -0.34
CD44-224ENST00000526669 EPN3Q9H201 632 aa12.92□□□□□ -0.34
CD44-224ENST00000526669 MYNNQ9NPC7 610 aa12.92□□□□□ -0.34
CD44-224ENST00000526669 PRTFDC1Q9NRG1 225 aa12.92□□□□□ -0.34
CD44-224ENST00000526669 LANCL2Q9NS86 450 aa12.92□□□□□ -0.34
CD44-224ENST00000526669 NOP53Q9NZM5 478 aaKnown RBP12.92□□□□□ -0.34
CD44-224ENST00000526669 KLHL14Q9P2G3 628 aa12.92□□□□□ -0.34
CD44-224ENST00000526669 IL17BQ9UHF5 180 aa12.92□□□□□ -0.34
CD44-224ENST00000526669 FARSAQ9Y285 508 aaKnown RBP12.92□□□□□ -0.34
CD44-224ENST00000526669 ASPMQ8IZT6 3477 aa12.92□□□□□ -0.34
CD44-224ENST00000526669 TPRP12270 2363 aaKnown RBP12.91□□□□□ -0.34
CD44-224ENST00000526669 IGLV3-12A0A075B6K2 115 aa12.91□□□□□ -0.34
CD44-224ENST00000526669 C9JVG2 144 aa12.91□□□□□ -0.34
CD44-224ENST00000526669 CYR61O00622 381 aa12.91□□□□□ -0.34
CD44-224ENST00000526669 UBDO15205 165 aa12.91□□□□□ -0.34
CD44-224ENST00000526669 SHOX2O60902 331 aaPredicted RBP12.91□□□□□ -0.34
CD44-224ENST00000526669 LDB3O75112 727 aa12.91□□□□□ -0.34
CD44-224ENST00000526669 ALBP02768 609 aa12.91□□□□□ -0.34
CD44-224ENST00000526669 HEXBP07686 556 aa12.91□□□□□ -0.34
CD44-224ENST00000526669 PRPS2P11908 318 aa12.91□□□□□ -0.34
CD44-224ENST00000526669 LIFP15018 202 aa12.91□□□□□ -0.34
CD44-224ENST00000526669 RPS15P62841 145 aaKnown RBP12.91□□□□□ -0.34
CD44-224ENST00000526669 TRA2BP62995 288 aaKnown RBP12.91□□□□□ -0.34
CD44-224ENST00000526669 SMU1Q2TAY7 513 aa12.91□□□□□ -0.34
CD44-224ENST00000526669 FAM71E1Q6IPT2 247 aa12.91□□□□□ -0.34
CD44-224ENST00000526669 OGFOD2Q6N063 350 aa12.91□□□□□ -0.34
CD44-224ENST00000526669 ANKRD26P1Q6NSI1 321 aa12.91□□□□□ -0.34
CD44-224ENST00000526669 FAM180BQ6P0A1 224 aa12.91□□□□□ -0.34
CD44-224ENST00000526669 SPATA19Q7Z5L4 167 aa12.91□□□□□ -0.34
CD44-224ENST00000526669 TMEM132CQ8N3T6 1108 aa12.91□□□□□ -0.34
CD44-224ENST00000526669 KRTCAP2Q8N6L1 136 aa12.91□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms