RNA–Protein interactions for RNA: ENST00000526553.5

CD44-223, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 4

Gene CD44, Length 571 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-223ENST00000526553 NACAP1Q9BZK3 213 aa3.76□□□□□ -1.81
CD44-223ENST00000526553 TSPYL1Q9H0U9 437 aa3.76□□□□□ -1.81
CD44-223ENST00000526553 MIS18AQ9NYP9 233 aa3.76□□□□□ -1.81
CD44-223ENST00000526553 POLKQ9UBT6 870 aa3.76□□□□□ -1.81
CD44-223ENST00000526553 TRIM10Q9UDY6 481 aa3.76□□□□□ -1.81
CD44-223ENST00000526553 BAIAP2L1Q9UHR4 511 aa3.76□□□□□ -1.81
CD44-223ENST00000526553 KLK4Q9Y5K2 254 aa3.76□□□□□ -1.81
CD44-223ENST00000526553 COLEC10Q9Y6Z7 277 aa3.76□□□□□ -1.81
CD44-223ENST00000526553 NEDD4P46934 1319 aa3.75□□□□□ -1.81
CD44-223ENST00000526553 KIF21AQ7Z4S6 1674 aa3.75□□□□□ -1.81
CD44-223ENST00000526553 IGLV4-3A0A075B6K6 122 aa3.75□□□□□ -1.81
CD44-223ENST00000526553 A0A0A6YYC8 382 aaPredicted RBP3.75□□□□□ -1.81
CD44-223ENST00000526553 KRT87PA6NCN2 255 aa3.75□□□□□ -1.81
CD44-223ENST00000526553 PRSS46E5RG02 174 aa3.75□□□□□ -1.81
CD44-223ENST00000526553 H3BMM5 538 aa3.75□□□□□ -1.81
CD44-223ENST00000526553 I3L1I5 382 aaPredicted RBP3.75□□□□□ -1.81
CD44-223ENST00000526553 HOXD4P09016 255 aaPredicted RBP3.75□□□□□ -1.81
CD44-223ENST00000526553 SBK2P0C263 348 aa3.75□□□□□ -1.81
CD44-223ENST00000526553 SP9P0CG40 484 aa3.75□□□□□ -1.81
CD44-223ENST00000526553 IL4RP24394 825 aa3.75□□□□□ -1.81
CD44-223ENST00000526553 PKLRP30613 574 aa3.75□□□□□ -1.81
CD44-223ENST00000526553 ETV5P41161 510 aa3.75□□□□□ -1.81
CD44-223ENST00000526553 OR3A3P47888 321 aa3.75□□□□□ -1.81
CD44-223ENST00000526553 RGS19P49795 217 aa3.75□□□□□ -1.81
CD44-223ENST00000526553 UCP2P55851 309 aa3.75□□□□□ -1.81
CD44-223ENST00000526553 YBEYP58557 167 aaPredicted RBP3.75□□□□□ -1.81
CD44-223ENST00000526553 KIAA0141Q14154 515 aaPredicted RBP3.75□□□□□ -1.81
CD44-223ENST00000526553 PPA1Q15181 289 aa3.75□□□□□ -1.81
CD44-223ENST00000526553 ACKR1Q16570 336 aa3.75□□□□□ -1.81
CD44-223ENST00000526553 UPP1Q16831 310 aa3.75□□□□□ -1.81
CD44-223ENST00000526553 AGAP6Q5VW22 663 aa3.75□□□□□ -1.81
CD44-223ENST00000526553 PRAMEF8Q5VWM4 474 aa3.75□□□□□ -1.81
CD44-223ENST00000526553 DHRS11Q6UWP2 260 aa3.75□□□□□ -1.81
CD44-223ENST00000526553 CATSPER4Q7RTX7 472 aa3.75□□□□□ -1.81
CD44-223ENST00000526553 CCDC185Q8N715 623 aa3.75□□□□□ -1.81
CD44-223ENST00000526553 RPLP0P6Q8NHW5 317 aa3.75□□□□□ -1.81
CD44-223ENST00000526553 ZDHHC19Q8WVZ1 309 aaPredicted RBP3.75□□□□□ -1.81
CD44-223ENST00000526553 SLC13A3Q8WWT9 602 aa3.75□□□□□ -1.81
CD44-223ENST00000526553 RSPH1Q8WYR4 309 aa3.75□□□□□ -1.81
CD44-223ENST00000526553 RUNDC3BQ96NL0 473 aa3.75□□□□□ -1.81
CD44-223ENST00000526553 PRAM1Q96QH2 718 aa3.75□□□□□ -1.81
CD44-223ENST00000526553 CHCHD5Q9BSY4 110 aa3.75□□□□□ -1.81
CD44-223ENST00000526553 RPP25Q9BUL9 199 aaKnown RBP3.75□□□□□ -1.81
CD44-223ENST00000526553 CUEDC2Q9H467 287 aa3.75□□□□□ -1.81
CD44-223ENST00000526553 HEXA-AS1Q9H8Q6 139 aa3.75□□□□□ -1.81
CD44-223ENST00000526553 HPF1Q9NWY4 346 aa3.75□□□□□ -1.81
CD44-223ENST00000526553 GTSE1Q9NYZ3 720 aa3.75□□□□□ -1.81
CD44-223ENST00000526553 NOCTQ9UK39 431 aaKnown RBP3.75□□□□□ -1.81
CD44-223ENST00000526553 TSPAN16Q9UKR8 245 aa3.75□□□□□ -1.81
CD44-223ENST00000526553 HBS1LQ9Y450 684 aaKnown RBP3.75□□□□□ -1.81
CD44-223ENST00000526553 A0A087X0K7 114 aa3.74□□□□□ -1.81
CD44-223ENST00000526553 MAGEB2O15479 319 aa3.74□□□□□ -1.81
CD44-223ENST00000526553 NME6O75414 186 aaPredicted RBP3.74□□□□□ -1.81
CD44-223ENST00000526553 RPLP0P05388 317 aaKnown RBP3.74□□□□□ -1.81
CD44-223ENST00000526553 ABHD2P08910 425 aa3.74□□□□□ -1.81
CD44-223ENST00000526553 PCP11498 1178 aaKnown RBP3.74□□□□□ -1.81
CD44-223ENST00000526553 SELEP16581 610 aa3.74□□□□□ -1.81
CD44-223ENST00000526553 OR3A1P47881 315 aa3.74□□□□□ -1.81
CD44-223ENST00000526553 CASP9P55211 416 aa3.74□□□□□ -1.81
CD44-223ENST00000526553 FKBP3Q00688 224 aaKnown RBP3.74□□□□□ -1.81
CD44-223ENST00000526553 FCHO2Q0JRZ9 810 aa3.74□□□□□ -1.81
CD44-223ENST00000526553 GRB14Q14449 540 aa3.74□□□□□ -1.81
CD44-223ENST00000526553 ZNF146Q15072 292 aa3.74□□□□□ -1.81
CD44-223ENST00000526553 HIGD2BQ4VC39 106 aa3.74□□□□□ -1.81
CD44-223ENST00000526553 SPANXN4Q5MJ08 99 aa3.74□□□□□ -1.81
CD44-223ENST00000526553 KLHL10Q6JEL2 608 aa3.74□□□□□ -1.81
CD44-223ENST00000526553 ZNF841Q6ZN19 808 aa3.74□□□□□ -1.81
CD44-223ENST00000526553 COX8CQ7Z4L0 72 aa3.74□□□□□ -1.81
CD44-223ENST00000526553 RNF130Q86XS8 419 aa3.74□□□□□ -1.81
CD44-223ENST00000526553 SLC39A11Q8N1S5 342 aa3.74□□□□□ -1.81
CD44-223ENST00000526553 OR9Q2Q8NGE9 314 aa3.74□□□□□ -1.81
CD44-223ENST00000526553 OR52B6Q8NGF0 335 aa3.74□□□□□ -1.81
CD44-223ENST00000526553 OR5M9Q8NGP3 310 aa3.74□□□□□ -1.81
CD44-223ENST00000526553 THOC2Q8NI27 1593 aaKnown RBP3.74□□□□□ -1.81
CD44-223ENST00000526553 ZNF597Q96LX8 424 aa3.74□□□□□ -1.81
CD44-223ENST00000526553 PSMB7Q99436 277 aa3.74□□□□□ -1.81
CD44-223ENST00000526553 FAM213AQ9BRX8 229 aa3.74□□□□□ -1.81
CD44-223ENST00000526553 ALKBH7Q9BT30 221 aaPredicted RBP3.74□□□□□ -1.81
CD44-223ENST00000526553 PUS3Q9BZE2 481 aaKnown RBP3.74□□□□□ -1.81
CD44-223ENST00000526553 MRPL17Q9NRX2 175 aaKnown RBP3.74□□□□□ -1.81
CD44-223ENST00000526553 KLK11Q9UBX7 282 aa3.74□□□□□ -1.81
CD44-223ENST00000526553 TRMT6Q9UJA5 497 aaKnown RBP3.74□□□□□ -1.81
CD44-223ENST00000526553 POMT2Q9UKY4 750 aa3.74□□□□□ -1.81
CD44-223ENST00000526553 CCPG1Q9ULG6 757 aa3.74□□□□□ -1.81
CD44-223ENST00000526553 FOXA2Q9Y261 457 aaPredicted RBP3.74□□□□□ -1.81
CD44-223ENST00000526553 RPH3AQ9Y2J0 694 aaPredicted RBP3.74□□□□□ -1.81
CD44-223ENST00000526553 SPATA31D1Q6ZQQ2 1576 aa3.73□□□□□ -1.81
CD44-223ENST00000526553 MAGEB16A2A368 324 aa3.73□□□□□ -1.81
CD44-223ENST00000526553 GLTPD2A6NH11 291 aa3.73□□□□□ -1.81
CD44-223ENST00000526553 BCL2L11O43521 198 aa3.73□□□□□ -1.81
CD44-223ENST00000526553 KIF5CO60282 957 aa3.73□□□□□ -1.81
CD44-223ENST00000526553 LETM1O95202 739 aaPredicted RBP3.73□□□□□ -1.81
CD44-223ENST00000526553 ALPPP05187 535 aa3.73□□□□□ -1.81
CD44-223ENST00000526553 ALPPL2P10696 532 aa3.73□□□□□ -1.81
CD44-223ENST00000526553 FERP16591 822 aa3.73□□□□□ -1.81
CD44-223ENST00000526553 DESP17661 470 aa3.73□□□□□ -1.81
CD44-223ENST00000526553 GIFP27352 417 aa3.73□□□□□ -1.81
CD44-223ENST00000526553 SSTR1P30872 391 aa3.73□□□□□ -1.81
CD44-223ENST00000526553 MAGEB1P43366 347 aa3.73□□□□□ -1.81
CD44-223ENST00000526553 CSRP3P50461 194 aa3.73□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms