RNA–Protein interactions for RNA: ENST00000526299.5

ECHDC1-219, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 5

Gene ECHDC1, Length 534 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-219ENST00000526299 RPA1P27694 616 aa1.5□□□□□ -2.17
ECHDC1-219ENST00000526299 IL10RBQ08334 325 aa1.5□□□□□ -2.17
ECHDC1-219ENST00000526299 C14orf28Q4W4Y0 310 aa1.5□□□□□ -2.17
ECHDC1-219ENST00000526299 PAN3Q58A45 887 aaKnown RBP1.5□□□□□ -2.17
ECHDC1-219ENST00000526299 RILPL1Q5EBL4 403 aa1.5□□□□□ -2.17
ECHDC1-219ENST00000526299 GPR157Q5UAW9 335 aa1.5□□□□□ -2.17
ECHDC1-219ENST00000526299 ZNF776Q68DI1 518 aaPredicted RBP1.5□□□□□ -2.17
ECHDC1-219ENST00000526299 FAM180BQ6P0A1 224 aa1.5□□□□□ -2.17
ECHDC1-219ENST00000526299 GCNT7Q6ZNI0 430 aa1.5□□□□□ -2.17
ECHDC1-219ENST00000526299 CERS3Q8IU89 383 aa1.5□□□□□ -2.17
ECHDC1-219ENST00000526299 GPR137CQ8N3F9 429 aa1.5□□□□□ -2.17
ECHDC1-219ENST00000526299 TPRX1Q8N7U7 411 aa1.5□□□□□ -2.17
ECHDC1-219ENST00000526299 CLEC1AQ8NC01 280 aa1.5□□□□□ -2.17
ECHDC1-219ENST00000526299 CAMKVQ8NCB2 501 aa1.5□□□□□ -2.17
ECHDC1-219ENST00000526299 ZNF540Q8NDQ6 660 aa1.5□□□□□ -2.17
ECHDC1-219ENST00000526299 SRSF12Q8WXF0 261 aaKnown RBP1.5□□□□□ -2.17
ECHDC1-219ENST00000526299 CDHR1Q96JP9 859 aa1.5□□□□□ -2.17
ECHDC1-219ENST00000526299 ABHD1Q96SE0 405 aa1.5□□□□□ -2.17
ECHDC1-219ENST00000526299 CHCHD6Q9BRQ6 235 aa1.5□□□□□ -2.17
ECHDC1-219ENST00000526299 MXD3Q9BW11 206 aa1.5□□□□□ -2.17
ECHDC1-219ENST00000526299 SLC25A39Q9BZJ4 359 aaPredicted RBP1.5□□□□□ -2.17
ECHDC1-219ENST00000526299 NACAP1Q9BZK3 213 aa1.5□□□□□ -2.17
ECHDC1-219ENST00000526299 UBA5Q9GZZ9 404 aa1.5□□□□□ -2.17
ECHDC1-219ENST00000526299 ZHX3Q9H4I2 956 aa1.5□□□□□ -2.17
ECHDC1-219ENST00000526299 NTN4Q9HB63 628 aa1.5□□□□□ -2.17
ECHDC1-219ENST00000526299 ABCC13Q9NSE7 274 aa1.5□□□□□ -2.17
ECHDC1-219ENST00000526299 CPSF2Q9P2I0 782 aaKnown RBP1.5□□□□□ -2.17
ECHDC1-219ENST00000526299 IGKV2D-24A0A075B6R9 120 aa1.49□□□□□ -2.17
ECHDC1-219ENST00000526299 CCDC189A1A4V9 331 aa1.49□□□□□ -2.17
ECHDC1-219ENST00000526299 OR5H15A6NDH6 313 aa1.49□□□□□ -2.17
ECHDC1-219ENST00000526299 ZNF732B4DXR9 585 aa1.49□□□□□ -2.17
ECHDC1-219ENST00000526299 PRAF2O60831 178 aa1.49□□□□□ -2.17
ECHDC1-219ENST00000526299 DUSP14O95147 198 aaKnown RBP1.49□□□□□ -2.17
ECHDC1-219ENST00000526299 PSG2P11465 335 aa1.49□□□□□ -2.17
ECHDC1-219ENST00000526299 P4HA1P13674 534 aa1.49□□□□□ -2.17
ECHDC1-219ENST00000526299 SLC1A3P43003 542 aa1.49□□□□□ -2.17
ECHDC1-219ENST00000526299 RASA2Q15283 850 aa1.49□□□□□ -2.17
ECHDC1-219ENST00000526299 SLC27A4Q6P1M0 643 aa1.49□□□□□ -2.17
ECHDC1-219ENST00000526299 MOXD1Q6UVY6 613 aa1.49□□□□□ -2.17
ECHDC1-219ENST00000526299 C17orf107Q6ZR85 190 aa1.49□□□□□ -2.17
ECHDC1-219ENST00000526299 ZNF589Q86UQ0 364 aaPredicted RBP1.49□□□□□ -2.17
ECHDC1-219ENST00000526299 ZNF677Q86XU0 584 aa1.49□□□□□ -2.17
ECHDC1-219ENST00000526299 APCDD1Q8J025 514 aa1.49□□□□□ -2.17
ECHDC1-219ENST00000526299 SLC43A2Q8N370 569 aa1.49□□□□□ -2.17
ECHDC1-219ENST00000526299 ZNF491Q8N8L2 437 aa1.49□□□□□ -2.17
ECHDC1-219ENST00000526299 TEX19Q8NA77 164 aa1.49□□□□□ -2.17
ECHDC1-219ENST00000526299 P2RX5Q93086 422 aa1.49□□□□□ -2.17
ECHDC1-219ENST00000526299 IL22RA2Q969J5 263 aa1.49□□□□□ -2.17
ECHDC1-219ENST00000526299 LINC00615Q96LM1 132 aaPredicted RBP1.49□□□□□ -2.17
ECHDC1-219ENST00000526299 CHRDL1Q9BU40 450 aa1.49□□□□□ -2.17
ECHDC1-219ENST00000526299 GTPBP2Q9BX10 602 aaKnown RBP1.49□□□□□ -2.17
ECHDC1-219ENST00000526299 NMUR2Q9GZQ4 415 aa1.49□□□□□ -2.17
ECHDC1-219ENST00000526299 FZD8Q9H461 694 aa1.49□□□□□ -2.17
ECHDC1-219ENST00000526299 ELL3Q9HB65 397 aaPredicted RBP1.49□□□□□ -2.17
ECHDC1-219ENST00000526299 SENP1Q9P0U3 644 aa1.49□□□□□ -2.17
ECHDC1-219ENST00000526299 RUVBL2Q9Y230 463 aaKnown RBP1.49□□□□□ -2.17
ECHDC1-219ENST00000526299 TCRBV21S2A2A0A5A6 115 aa1.48□□□□□ -2.17
ECHDC1-219ENST00000526299 TADA2AO75478 443 aa1.48□□□□□ -2.17
ECHDC1-219ENST00000526299 LUC7L3O95232 432 aaKnown RBP1.48□□□□□ -2.17
ECHDC1-219ENST00000526299 HSPB1P04792 205 aaKnown RBP1.48□□□□□ -2.17
ECHDC1-219ENST00000526299 RPS2P15880 293 aaKnown RBP1.48□□□□□ -2.17
ECHDC1-219ENST00000526299 PPP2R1BP30154 601 aa1.48□□□□□ -2.17
ECHDC1-219ENST00000526299 OR3A3P47888 321 aa1.48□□□□□ -2.17
ECHDC1-219ENST00000526299 STK4Q13043 487 aa1.48□□□□□ -2.17
ECHDC1-219ENST00000526299 ASAH1Q13510 395 aa1.48□□□□□ -2.17
ECHDC1-219ENST00000526299 TAZQ16635 292 aa1.48□□□□□ -2.17
ECHDC1-219ENST00000526299 ENPP7Q6UWV6 458 aa1.48□□□□□ -2.17
ECHDC1-219ENST00000526299 OR13F1Q8NGS4 319 aa1.48□□□□□ -2.17
ECHDC1-219ENST00000526299 GRK7Q8WTQ7 553 aa1.48□□□□□ -2.17
ECHDC1-219ENST00000526299 SPSB1Q96BD6 273 aa1.48□□□□□ -2.17
ECHDC1-219ENST00000526299 SPATA33Q96N06 139 aa1.48□□□□□ -2.17
ECHDC1-219ENST00000526299 C5orf66Q9H5L9 145 aa1.48□□□□□ -2.17
ECHDC1-219ENST00000526299 VPS28Q9UK41 221 aa1.48□□□□□ -2.17
ECHDC1-219ENST00000526299 PCDHGB4Q9UN71 923 aa1.48□□□□□ -2.17
ECHDC1-219ENST00000526299 EXOC6BQ9Y2D4 811 aa1.48□□□□□ -2.17
ECHDC1-219ENST00000526299 A8MX80 341 aa1.47□□□□□ -2.17
ECHDC1-219ENST00000526299 NPIPA3F8WFD2 350 aa1.47□□□□□ -2.17
ECHDC1-219ENST00000526299 EEF2KO00418 725 aaKnown RBP1.47□□□□□ -2.17
ECHDC1-219ENST00000526299 B4GAT1O43505 415 aa1.47□□□□□ -2.17
ECHDC1-219ENST00000526299 BEST1O76090 585 aa1.47□□□□□ -2.17
ECHDC1-219ENST00000526299 HSP90AA1P07900 732 aaKnown RBP1.47□□□□□ -2.17
ECHDC1-219ENST00000526299 ZNF44P15621 663 aa1.47□□□□□ -2.17
ECHDC1-219ENST00000526299 CASP2P42575 452 aa1.47□□□□□ -2.17
ECHDC1-219ENST00000526299 CSE1LP55060 971 aaKnown RBP1.47□□□□□ -2.17
ECHDC1-219ENST00000526299 DDX10Q13206 875 aaKnown RBP1.47□□□□□ -2.17
ECHDC1-219ENST00000526299 PPA1Q15181 289 aa1.47□□□□□ -2.17
ECHDC1-219ENST00000526299 RALBP1Q15311 655 aa1.47□□□□□ -2.17
ECHDC1-219ENST00000526299 SCARA5Q6ZMJ2 495 aa1.47□□□□□ -2.17
ECHDC1-219ENST00000526299 MAATS1Q7Z4T9 603 aa1.47□□□□□ -2.17
ECHDC1-219ENST00000526299 NRARPQ7Z6K4 114 aa1.47□□□□□ -2.17
ECHDC1-219ENST00000526299 ERI1Q8IV48 349 aaKnown RBP1.47□□□□□ -2.17
ECHDC1-219ENST00000526299 ARL14Q8N4G2 192 aa1.47□□□□□ -2.17
ECHDC1-219ENST00000526299 Q8N9G6 341 aaPredicted RBP1.47□□□□□ -2.17
ECHDC1-219ENST00000526299 ADAMTS16Q8TE57 1224 aa1.47□□□□□ -2.17
ECHDC1-219ENST00000526299 MPP4Q96JB8 637 aa1.47□□□□□ -2.17
ECHDC1-219ENST00000526299 LRRC3BQ96PB8 259 aa1.47□□□□□ -2.17
ECHDC1-219ENST00000526299 SDF4Q9BRK5 362 aa1.47□□□□□ -2.17
ECHDC1-219ENST00000526299 TNMDQ9H2S6 317 aa1.47□□□□□ -2.17
ECHDC1-219ENST00000526299 FN3KQ9H479 309 aa1.47□□□□□ -2.17
ECHDC1-219ENST00000526299 IMPAD1Q9NX62 359 aa1.47□□□□□ -2.17
Retrieved 100 of 20,778 RNA–protein pairs in 125 ms