RNA–Protein interactions for RNA: ENST00000526216.1

COLCA2-202, Transcript of colorectal cancer associated 2, humanhuman

TSL 1 (best) BASIC

Gene COLCA2, Length 1,332 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COLCA2-202ENST00000526216 C1orf21Q9H246 121 aa13.61□□□□□ -0.23
COLCA2-202ENST00000526216 EFCAB1Q9HAE3 211 aa13.61□□□□□ -0.23
COLCA2-202ENST00000526216 ANKHQ9HCJ1 492 aa13.61□□□□□ -0.23
COLCA2-202ENST00000526216 LYRM4Q9HD34 91 aa13.61□□□□□ -0.23
COLCA2-202ENST00000526216 CUTCQ9NTM9 273 aa13.61□□□□□ -0.23
COLCA2-202ENST00000526216 IRAK4Q9NWZ3 460 aa13.61□□□□□ -0.23
COLCA2-202ENST00000526216 SH3BP4Q9P0V3 963 aa13.61□□□□□ -0.23
COLCA2-202ENST00000526216 MAPRE3Q9UPY8 281 aa13.61□□□□□ -0.23
COLCA2-202ENST00000526216 ZNF292O60281 2723 aa13.61□□□□□ -0.23
COLCA2-202ENST00000526216 RIF1Q5UIP0 2472 aaKnown RBP13.6□□□□□ -0.23
COLCA2-202ENST00000526216 EP300Q09472 2414 aaPredicted RBP13.6□□□□□ -0.23
COLCA2-202ENST00000526216 ZFHX2Q9C0A1 2572 aaPredicted RBP13.6□□□□□ -0.23
COLCA2-202ENST00000526216 TRBV5-3A0A0A0MS03 114 aa13.6□□□□□ -0.23
COLCA2-202ENST00000526216 GLOD5A6NK44 160 aa13.6□□□□□ -0.23
COLCA2-202ENST00000526216 EFCAB7A8K855 629 aa13.6□□□□□ -0.23
COLCA2-202ENST00000526216 FAM227AF5H4B4 570 aa13.6□□□□□ -0.23
COLCA2-202ENST00000526216 CYR61O00622 381 aa13.6□□□□□ -0.23
COLCA2-202ENST00000526216 CHST10O43529 356 aa13.6□□□□□ -0.23
COLCA2-202ENST00000526216 FOXD2O60548 495 aaPredicted RBP13.6□□□□□ -0.23
COLCA2-202ENST00000526216 DKK1O94907 266 aa13.6□□□□□ -0.23
COLCA2-202ENST00000526216 C1QCP02747 245 aa13.6□□□□□ -0.23
COLCA2-202ENST00000526216 CCL4P13236 92 aa13.6□□□□□ -0.23
COLCA2-202ENST00000526216 DRD2P14416 443 aa13.6□□□□□ -0.23
COLCA2-202ENST00000526216 ALDH9A1P49189 494 aa13.6□□□□□ -0.23
COLCA2-202ENST00000526216 LIMK1P53667 647 aa13.6□□□□□ -0.23
COLCA2-202ENST00000526216 KCNJ2P63252 427 aa13.6□□□□□ -0.23
COLCA2-202ENST00000526216 MXRA7P84157 204 aa13.6□□□□□ -0.23
COLCA2-202ENST00000526216 SHC2P98077 582 aa13.6□□□□□ -0.23
COLCA2-202ENST00000526216 MAT1AQ00266 395 aaKnown RBP13.6□□□□□ -0.23
COLCA2-202ENST00000526216 HEPACAMQ14CZ8 416 aa13.6□□□□□ -0.23
COLCA2-202ENST00000526216 TRIP6Q15654 476 aaKnown RBP13.6□□□□□ -0.23
COLCA2-202ENST00000526216 NDUFA9Q16795 377 aa13.6□□□□□ -0.23
COLCA2-202ENST00000526216 SYT16Q17RD7 645 aa13.6□□□□□ -0.23
COLCA2-202ENST00000526216 MMEL1Q495T6 779 aa13.6□□□□□ -0.23
COLCA2-202ENST00000526216 TLDC1Q6P9B6 456 aa13.6□□□□□ -0.23
COLCA2-202ENST00000526216 MSANTD1Q6ZTZ1 278 aa13.6□□□□□ -0.23
COLCA2-202ENST00000526216 R3HCC1LQ7Z5L2 792 aaKnown RBP13.6□□□□□ -0.23
COLCA2-202ENST00000526216 STARD8Q92502 1023 aa13.6□□□□□ -0.23
COLCA2-202ENST00000526216 PMEPA1Q969W9 287 aa13.6□□□□□ -0.23
COLCA2-202ENST00000526216 PPCDCQ96CD2 204 aa13.6□□□□□ -0.23
COLCA2-202ENST00000526216 KLHL29Q96CT2 875 aa13.6□□□□□ -0.23
COLCA2-202ENST00000526216 NPLQ9BXD5 320 aaPredicted RBP13.6□□□□□ -0.23
COLCA2-202ENST00000526216 TRIM4Q9C037 500 aa13.6□□□□□ -0.23
COLCA2-202ENST00000526216 BHLHE41Q9C0J9 482 aaPredicted RBP13.6□□□□□ -0.23
COLCA2-202ENST00000526216 ACTR5Q9H9F9 607 aaPredicted RBP13.6□□□□□ -0.23
COLCA2-202ENST00000526216 IL1RL2Q9HB29 575 aa13.6□□□□□ -0.23
COLCA2-202ENST00000526216 HCN3Q9P1Z3 774 aa13.6□□□□□ -0.23
COLCA2-202ENST00000526216 DHCR7Q9UBM7 475 aaKnown RBP13.6□□□□□ -0.23
COLCA2-202ENST00000526216 PHF11Q9UIL8 331 aa13.6□□□□□ -0.23
COLCA2-202ENST00000526216 PCDHGA7Q9Y5G6 932 aa13.6□□□□□ -0.23
COLCA2-202ENST00000526216 A0A088AWK7 358 aa13.59□□□□□ -0.23
COLCA2-202ENST00000526216 PMS2P1A4D2B8 440 aa13.59□□□□□ -0.23
COLCA2-202ENST00000526216 GYG2O15488 501 aa13.59□□□□□ -0.23
COLCA2-202ENST00000526216 GSC2O15499 205 aa13.59□□□□□ -0.23
COLCA2-202ENST00000526216 DNAJC8O75937 253 aaPredicted RBP13.59□□□□□ -0.23
COLCA2-202ENST00000526216 NR2F6P10588 404 aa13.59□□□□□ -0.23
COLCA2-202ENST00000526216 ZNF10P21506 573 aaPredicted RBP13.59□□□□□ -0.23
COLCA2-202ENST00000526216 CPN2P22792 545 aa13.59□□□□□ -0.23
COLCA2-202ENST00000526216 RPL3P39023 403 aaKnown RBP13.59□□□□□ -0.23
COLCA2-202ENST00000526216 FRKP42685 505 aaPredicted RBP13.59□□□□□ -0.23
COLCA2-202ENST00000526216 MNAT1P51948 309 aa13.59□□□□□ -0.23
COLCA2-202ENST00000526216 RAB38P57729 211 aa13.59□□□□□ -0.23
COLCA2-202ENST00000526216 PSME3P61289 254 aa13.59□□□□□ -0.23
COLCA2-202ENST00000526216 NFYCQ13952 458 aa13.59□□□□□ -0.23
COLCA2-202ENST00000526216 CAPRIN1Q14444 709 aaKnown RBP13.59□□□□□ -0.23
COLCA2-202ENST00000526216 ZNF750Q32MQ0 723 aa13.59□□□□□ -0.23
COLCA2-202ENST00000526216 TRMT5Q32P41 509 aaKnown RBP13.59□□□□□ -0.23
COLCA2-202ENST00000526216 PWWP2BQ6NUJ5 590 aa13.59□□□□□ -0.23
COLCA2-202ENST00000526216 SLC48A1Q6P1K1 146 aa13.59□□□□□ -0.23
COLCA2-202ENST00000526216 DHRS13Q6UX07 377 aa13.59□□□□□ -0.23
COLCA2-202ENST00000526216 DNAJC14Q6Y2X3 702 aaPredicted RBP13.59□□□□□ -0.23
COLCA2-202ENST00000526216 TTLL10Q6ZVT0 673 aa13.59□□□□□ -0.23
COLCA2-202ENST00000526216 DHDDSQ86SQ9 333 aa13.59□□□□□ -0.23
COLCA2-202ENST00000526216 DEFB107AQ8IZN7 70 aa13.59□□□□□ -0.23
COLCA2-202ENST00000526216 SLC38A9Q8NBW4 561 aa13.59□□□□□ -0.23
COLCA2-202ENST00000526216 DNAJB14Q8TBM8 379 aa13.59□□□□□ -0.23
COLCA2-202ENST00000526216 EXOSC8Q96B26 276 aaKnown RBP13.59□□□□□ -0.23
COLCA2-202ENST00000526216 CCDC115Q96NT0 180 aa13.59□□□□□ -0.23
COLCA2-202ENST00000526216 FAIM2Q9BWQ8 316 aa13.59□□□□□ -0.23
COLCA2-202ENST00000526216 TRIM8Q9BZR9 551 aa13.59□□□□□ -0.23
COLCA2-202ENST00000526216 WDR41Q9HAD4 459 aa13.59□□□□□ -0.23
COLCA2-202ENST00000526216 FANCEQ9HB96 536 aa13.59□□□□□ -0.23
COLCA2-202ENST00000526216 MIEF1Q9NQG6 463 aa13.59□□□□□ -0.23
COLCA2-202ENST00000526216 FAM120CQ9NX05 1096 aaKnown RBP13.59□□□□□ -0.23
COLCA2-202ENST00000526216 TAS2R7Q9NYW3 318 aa13.59□□□□□ -0.23
COLCA2-202ENST00000526216 SLC25A37Q9NYZ2 338 aa13.59□□□□□ -0.23
COLCA2-202ENST00000526216 EHD3Q9NZN3 535 aa13.59□□□□□ -0.23
COLCA2-202ENST00000526216 GMPR2Q9P2T1 348 aaKnown RBP13.59□□□□□ -0.23
COLCA2-202ENST00000526216 SERTAD3Q9UJW9 196 aa13.59□□□□□ -0.23
COLCA2-202ENST00000526216 PCDHGA1Q9Y5H4 931 aa13.59□□□□□ -0.23
COLCA2-202ENST00000526216 SPEGQ15772 3267 aa13.58□□□□□ -0.23
COLCA2-202ENST00000526216 SPAARA0A1B0GVQ0 90 aa13.58□□□□□ -0.24
COLCA2-202ENST00000526216 A0A1W2PNU3 283 aaPredicted RBP13.58□□□□□ -0.24
COLCA2-202ENST00000526216 C1orf226A1L170 272 aa13.58□□□□□ -0.24
COLCA2-202ENST00000526216 TM4SF5O14894 197 aa13.58□□□□□ -0.24
COLCA2-202ENST00000526216 DSCR3O14972 297 aa13.58□□□□□ -0.24
COLCA2-202ENST00000526216 GSNP06396 782 aa13.58□□□□□ -0.24
COLCA2-202ENST00000526216 KRT16P08779 473 aa13.58□□□□□ -0.24
COLCA2-202ENST00000526216 FGF5P12034 268 aa13.58□□□□□ -0.24
COLCA2-202ENST00000526216 CSTF2P33240 577 aaKnown RBP eCLIP13.58□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms