RNA–Protein interactions for RNA: ENST00000525459.1

PTPRK-218, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

TSL 2 BASIC

Gene PTPRK, Length 1,722 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-218ENST00000525459 HEXBP07686 556 aa17.63■□□□□ 0.41
PTPRK-218ENST00000525459 ANXA4P09525 319 aaPredicted RBP17.63■□□□□ 0.41
PTPRK-218ENST00000525459 NR2F6P10588 404 aa17.63■□□□□ 0.41
PTPRK-218ENST00000525459 KITP10721 976 aa17.63■□□□□ 0.41
PTPRK-218ENST00000525459 F8A1P23610 371 aa17.63■□□□□ 0.41
PTPRK-218ENST00000525459 TMPRSS3P57727 454 aa17.63■□□□□ 0.41
PTPRK-218ENST00000525459 TLE3Q04726 772 aa17.63■□□□□ 0.41
PTPRK-218ENST00000525459 KIAA0040Q15053 153 aa17.63■□□□□ 0.41
PTPRK-218ENST00000525459 GALNTL6Q49A17 601 aa17.63■□□□□ 0.41
PTPRK-218ENST00000525459 MFSD4BQ5TF39 518 aa17.63■□□□□ 0.41
PTPRK-218ENST00000525459 NOXRED1Q6NXP6 359 aa17.63■□□□□ 0.41
PTPRK-218ENST00000525459 IKBIPQ70UQ0 350 aa17.63■□□□□ 0.41
PTPRK-218ENST00000525459 FAM9CQ8IZT9 166 aa17.63■□□□□ 0.41
PTPRK-218ENST00000525459 STON2Q8WXE9 905 aa17.63■□□□□ 0.41
PTPRK-218ENST00000525459 C19orf25Q9UFG5 118 aaPredicted RBP17.63■□□□□ 0.41
PTPRK-218ENST00000525459 IL17BQ9UHF5 180 aa17.63■□□□□ 0.41
PTPRK-218ENST00000525459 C3orf18Q9UK00 162 aa17.63■□□□□ 0.41
PTPRK-218ENST00000525459 ATP6AP2A0A1C7CYW4 349 aa17.62■□□□□ 0.41
PTPRK-218ENST00000525459 C1orf226A1L170 272 aa17.62■□□□□ 0.41
PTPRK-218ENST00000525459 CYR61O00622 381 aa17.62■□□□□ 0.41
PTPRK-218ENST00000525459 PROM1O43490 865 aa17.62■□□□□ 0.41
PTPRK-218ENST00000525459 ATP6AP2O75787 350 aa17.62■□□□□ 0.41
PTPRK-218ENST00000525459 JUNP05412 331 aaKnown RBP17.62■□□□□ 0.41
PTPRK-218ENST00000525459 PRR35P0CG20 571 aa17.62■□□□□ 0.41
PTPRK-218ENST00000525459 ATXN8OSP0DMR3 200 aa17.62■□□□□ 0.41
PTPRK-218ENST00000525459 ALOX15P16050 662 aaPredicted RBP17.62■□□□□ 0.41
PTPRK-218ENST00000525459 MMP11P24347 488 aa17.62■□□□□ 0.41
PTPRK-218ENST00000525459 HNRNPH2P55795 449 aaKnown RBP17.62■□□□□ 0.41
PTPRK-218ENST00000525459 RAE1P78406 368 aaKnown RBP17.62■□□□□ 0.41
PTPRK-218ENST00000525459 BIKQ13323 160 aa17.62■□□□□ 0.41
PTPRK-218ENST00000525459 HEPACAMQ14CZ8 416 aa17.62■□□□□ 0.41
PTPRK-218ENST00000525459 UGT8Q16880 541 aa17.62■□□□□ 0.41
PTPRK-218ENST00000525459 C6orf136Q5SQH8 315 aa17.62■□□□□ 0.41
PTPRK-218ENST00000525459 CCDC81Q6ZN84 652 aa17.62■□□□□ 0.41
PTPRK-218ENST00000525459 FAM47BQ8NA70 645 aa17.62■□□□□ 0.41
PTPRK-218ENST00000525459 METTL21AQ8WXB1 218 aa17.62■□□□□ 0.41
PTPRK-218ENST00000525459 C3orf30Q96M34 536 aa17.62■□□□□ 0.41
PTPRK-218ENST00000525459 ASIC5Q9NY37 505 aa17.62■□□□□ 0.41
PTPRK-218ENST00000525459 USH1CQ9Y6N9 552 aa17.62■□□□□ 0.41
PTPRK-218ENST00000525459 ASPMQ8IZT6 3477 aa17.62■□□□□ 0.41
PTPRK-218ENST00000525459 PRMT3O60678 531 aa17.61■□□□□ 0.41
PTPRK-218ENST00000525459 GBAP04062 536 aa17.61■□□□□ 0.41
PTPRK-218ENST00000525459 UMODP07911 640 aa17.61■□□□□ 0.41
PTPRK-218ENST00000525459 ASMTP46597 345 aa17.61■□□□□ 0.41
PTPRK-218ENST00000525459 EMP2P54851 167 aa17.61■□□□□ 0.41
PTPRK-218ENST00000525459 RPS18P62269 152 aaKnown RBP17.61■□□□□ 0.41
PTPRK-218ENST00000525459 ERVK-8P63133 956 aa17.61■□□□□ 0.41
PTPRK-218ENST00000525459 OR52E8Q6IFG1 317 aa17.61■□□□□ 0.41
PTPRK-218ENST00000525459 OGFOD2Q6N063 350 aa17.61■□□□□ 0.41
PTPRK-218ENST00000525459 FNDC5Q8NAU1 212 aa17.61■□□□□ 0.41
PTPRK-218ENST00000525459 PLPP5Q8NEB5 264 aa17.61■□□□□ 0.41
PTPRK-218ENST00000525459 TANKQ92844 425 aa17.61■□□□□ 0.41
PTPRK-218ENST00000525459 MAELQ96JY0 434 aaKnown RBP17.61■□□□□ 0.41
PTPRK-218ENST00000525459 RBCK1Q9BYM8 510 aa17.61■□□□□ 0.41
PTPRK-218ENST00000525459 VN1R1Q9GZP7 353 aa17.61■□□□□ 0.41
PTPRK-218ENST00000525459 RPF2Q9H7B2 306 aaKnown RBP17.61■□□□□ 0.41
PTPRK-218ENST00000525459 MYNNQ9NPC7 610 aa17.61■□□□□ 0.41
PTPRK-218ENST00000525459 PRTFDC1Q9NRG1 225 aa17.61■□□□□ 0.41
PTPRK-218ENST00000525459 NOP53Q9NZM5 478 aaKnown RBP17.61■□□□□ 0.41
PTPRK-218ENST00000525459 ATG4BQ9Y4P1 393 aa17.61■□□□□ 0.41
PTPRK-218ENST00000525459 ANKRD11Q6UB99 2663 aaPredicted RBP17.61■□□□□ 0.41
PTPRK-218ENST00000525459 ACACBO00763 2458 aa17.61■□□□□ 0.41
PTPRK-218ENST00000525459 PEX11AO75192 247 aa17.61■□□□□ 0.41
PTPRK-218ENST00000525459 PRPS2P11908 318 aa17.61■□□□□ 0.41
PTPRK-218ENST00000525459 DRD2P14416 443 aa17.61■□□□□ 0.41
PTPRK-218ENST00000525459 RHAGQ02094 409 aa17.61■□□□□ 0.41
PTPRK-218ENST00000525459 EMX2Q04743 252 aa17.61■□□□□ 0.41
PTPRK-218ENST00000525459 RFTN2Q52LD8 501 aaPredicted RBP17.61■□□□□ 0.41
PTPRK-218ENST00000525459 NDUFAF5Q5TEU4 345 aa17.61■□□□□ 0.41
PTPRK-218ENST00000525459 SCUBE1Q8IWY4 988 aa17.61■□□□□ 0.41
PTPRK-218ENST00000525459 THAP4Q8WY91 577 aa17.61■□□□□ 0.41
PTPRK-218ENST00000525459 CSF3RQ99062 836 aa17.61■□□□□ 0.41
PTPRK-218ENST00000525459 MAPRE3Q9UPY8 281 aa17.61■□□□□ 0.41
PTPRK-218ENST00000525459 EIF3LQ9Y262 564 aaKnown RBP17.61■□□□□ 0.41
PTPRK-218ENST00000525459 POLR3HQ9Y535 204 aaPredicted RBP17.61■□□□□ 0.41
PTPRK-218ENST00000525459 TAF4O00268 1085 aa17.6■□□□□ 0.41
PTPRK-218ENST00000525459 SDHDO14521 159 aa17.6■□□□□ 0.41
PTPRK-218ENST00000525459 B4GALT2O60909 372 aa17.6■□□□□ 0.41
PTPRK-218ENST00000525459 CTNSO60931 367 aa17.6■□□□□ 0.41
PTPRK-218ENST00000525459 DNAJB6O75190 326 aa17.6■□□□□ 0.41
PTPRK-218ENST00000525459 ALOX12BO75342 701 aa17.6■□□□□ 0.41
PTPRK-218ENST00000525459 AIFM1O95831 613 aa17.6■□□□□ 0.41
PTPRK-218ENST00000525459 C8orf89P0DMQ9 161 aa17.6■□□□□ 0.41
PTPRK-218ENST00000525459 TROVE2P10155 538 aaKnown RBP eCLIP17.6■□□□□ 0.41
PTPRK-218ENST00000525459 DDX5P17844 614 aaKnown RBP17.6■□□□□ 0.41
PTPRK-218ENST00000525459 LBPP18428 481 aa17.6■□□□□ 0.41
PTPRK-218ENST00000525459 SLC13A2Q13183 592 aa17.6■□□□□ 0.41
PTPRK-218ENST00000525459 PRSS58Q8IYP2 241 aa17.6■□□□□ 0.41
PTPRK-218ENST00000525459 TMEM132CQ8N3T6 1108 aa17.6■□□□□ 0.41
PTPRK-218ENST00000525459 ADAMTS17Q8TE56 1095 aa17.6■□□□□ 0.41
PTPRK-218ENST00000525459 EBPLQ9BY08 206 aa17.6■□□□□ 0.41
PTPRK-218ENST00000525459 TRIM55Q9BYV6 548 aa17.6■□□□□ 0.41
PTPRK-218ENST00000525459 AKTIPQ9H8T0 292 aa17.6■□□□□ 0.41
PTPRK-218ENST00000525459 TEX10Q9NXF1 929 aaPredicted RBP17.6■□□□□ 0.41
PTPRK-218ENST00000525459 FAM53CQ9NYF3 392 aa17.6■□□□□ 0.41
PTPRK-218ENST00000525459 EHD3Q9NZN3 535 aa17.6■□□□□ 0.41
PTPRK-218ENST00000525459 MRPS18BQ9Y676 258 aaKnown RBP17.6■□□□□ 0.41
PTPRK-218ENST00000525459 FRYQ5TBA9 3013 aa17.6■□□□□ 0.41
PTPRK-218ENST00000525459 A0A1W2PQ72 361 aa17.59■□□□□ 0.41
PTPRK-218ENST00000525459 A0A1W2PR48 441 aa17.59■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 86.2 ms