RNA–Protein interactions for RNA: ENST00000523237.1

CLN8-206, Transcript of CLN8, transmembrane ER and ERGIC protein, humanhuman

TSL 3

Gene CLN8, Length 835 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN8-206ENST00000523237 STX4Q12846 297 aa15.14■□□□□ 0.01
CLN8-206ENST00000523237 DDX39BQ13838 428 aaKnown RBP15.14■□□□□ 0.01
CLN8-206ENST00000523237 SERTAD2Q14140 314 aa15.14■□□□□ 0.01
CLN8-206ENST00000523237 PCBP2Q15366 365 aaKnown RBP eCLIP15.14■□□□□ 0.01
CLN8-206ENST00000523237 MAPKAPK3Q16644 382 aa15.14■□□□□ 0.01
CLN8-206ENST00000523237 ZNF800Q2TB10 664 aaPredicted RBP eCLIP15.14■□□□□ 0.01
CLN8-206ENST00000523237 TECRLQ5HYJ1 363 aa15.14■□□□□ 0.01
CLN8-206ENST00000523237 DEPDC1Q5TB30 811 aa15.14■□□□□ 0.01
CLN8-206ENST00000523237 C1QL3Q5VWW1 255 aa15.14■□□□□ 0.01
CLN8-206ENST00000523237 METTL2BQ6P1Q9 378 aaKnown RBP15.14■□□□□ 0.01
CLN8-206ENST00000523237 FJX1Q86VR8 437 aa15.14■□□□□ 0.01
CLN8-206ENST00000523237 TMEM132CQ8N3T6 1108 aa15.14■□□□□ 0.01
CLN8-206ENST00000523237 C7orf57Q8NEG2 295 aa15.14■□□□□ 0.01
CLN8-206ENST00000523237 HUS1BQ8NHY5 278 aa15.14■□□□□ 0.01
CLN8-206ENST00000523237 THAP3Q8WTV1 239 aaPredicted RBP15.14■□□□□ 0.01
CLN8-206ENST00000523237 NCLNQ969V3 563 aa15.14■□□□□ 0.01
CLN8-206ENST00000523237 RELTQ969Z4 430 aa15.14■□□□□ 0.01
CLN8-206ENST00000523237 REPS1Q96D71 796 aa15.14■□□□□ 0.01
CLN8-206ENST00000523237 GPR78Q96P69 363 aa15.14■□□□□ 0.01
CLN8-206ENST00000523237 PAFAH2Q99487 392 aa15.14■□□□□ 0.01
CLN8-206ENST00000523237 MAPKAP1Q9BPZ7 522 aa15.14■□□□□ 0.01
CLN8-206ENST00000523237 CLCA3PQ9Y6N3 262 aa15.14■□□□□ 0.01
CLN8-206ENST00000523237 SAP18O00422 153 aaKnown RBP15.13■□□□□ 0.01
CLN8-206ENST00000523237 NME2P1O60361 137 aa15.13■□□□□ 0.01
CLN8-206ENST00000523237 KRT38O76015 456 aa15.13■□□□□ 0.01
CLN8-206ENST00000523237 ZFAND5O76080 213 aa15.13■□□□□ 0.01
CLN8-206ENST00000523237 RBP1P09455 135 aa15.13■□□□□ 0.01
CLN8-206ENST00000523237 NME2P22392 152 aa15.13■□□□□ 0.01
CLN8-206ENST00000523237 CPN2P22792 545 aa15.13■□□□□ 0.01
CLN8-206ENST00000523237 CNTFP26441 200 aa15.13■□□□□ 0.01
CLN8-206ENST00000523237 ECHS1P30084 290 aa15.13■□□□□ 0.01
CLN8-206ENST00000523237 GPR143P51810 404 aa15.13■□□□□ 0.01
CLN8-206ENST00000523237 GTF2H2Q13888 395 aa15.13■□□□□ 0.01
CLN8-206ENST00000523237 OR4C11Q6IEV9 310 aa15.13■□□□□ 0.01
CLN8-206ENST00000523237 GTF2H2CQ6P1K8 395 aa15.13■□□□□ 0.01
CLN8-206ENST00000523237 GOLGA7Q7Z5G4 137 aa15.13■□□□□ 0.01
CLN8-206ENST00000523237 KIF18AQ8NI77 898 aa15.13■□□□□ 0.01
CLN8-206ENST00000523237 DAZLQ92904 295 aaKnown RBP15.13■□□□□ 0.01
CLN8-206ENST00000523237 ISL2Q96A47 359 aa15.13■□□□□ 0.01
CLN8-206ENST00000523237 RGMAQ96B86 450 aa15.13■□□□□ 0.01
CLN8-206ENST00000523237 FRMD6Q96NE9 622 aa15.13■□□□□ 0.01
CLN8-206ENST00000523237 MTERF1Q99551 399 aaKnown RBP15.13■□□□□ 0.01
CLN8-206ENST00000523237 ALOXE3Q9BYJ1 711 aa15.13■□□□□ 0.01
CLN8-206ENST00000523237 OR51B5Q9H339 312 aa15.13■□□□□ 0.01
CLN8-206ENST00000523237 IPPKQ9H8X2 491 aa15.13■□□□□ 0.01
CLN8-206ENST00000523237 DMRT3Q9NQL9 472 aa15.13■□□□□ 0.01
CLN8-206ENST00000523237 MS4A12Q9NXJ0 267 aa15.13■□□□□ 0.01
CLN8-206ENST00000523237 VTI1BQ9UEU0 232 aa15.13■□□□□ 0.01
CLN8-206ENST00000523237 ZNF223Q9UK11 482 aaPredicted RBP15.13■□□□□ 0.01
CLN8-206ENST00000523237 TSC22D4Q9Y3Q8 395 aa15.13■□□□□ 0.01
CLN8-206ENST00000523237 A0A087WUV0 522 aaPredicted RBP15.12■□□□□ 0.01
CLN8-206ENST00000523237 TRGV8A0A0C4DH27 118 aa15.12■□□□□ 0.01
CLN8-206ENST00000523237 LRRC14BA6NHZ5 514 aa15.12■□□□□ 0.01
CLN8-206ENST00000523237 POC1B-GALNT4F8VUJ3 575 aa15.12■□□□□ 0.01
CLN8-206ENST00000523237 H0YIV9 168 aa15.12■□□□□ 0.01
CLN8-206ENST00000523237 ZG16O60844 167 aa15.12■□□□□ 0.01
CLN8-206ENST00000523237 LDB3O75112 727 aa15.12■□□□□ 0.01
CLN8-206ENST00000523237 ITGA10O75578 1167 aa15.12■□□□□ 0.01
CLN8-206ENST00000523237 MAGEA12P43365 314 aa15.12■□□□□ 0.01
CLN8-206ENST00000523237 ARFIP1P53367 373 aa15.12■□□□□ 0.01
CLN8-206ENST00000523237 CASP6P55212 293 aa15.12■□□□□ 0.01
CLN8-206ENST00000523237 TSNAXIP1Q2TAA8 658 aa15.12■□□□□ 0.01
CLN8-206ENST00000523237 KRTCAP3Q53RY4 240 aa15.12■□□□□ 0.01
CLN8-206ENST00000523237 PNPLA5Q7Z6Z6 429 aaPredicted RBP15.12■□□□□ 0.01
CLN8-206ENST00000523237 PLD6Q8N2A8 252 aaKnown RBP15.12■□□□□ 0.01
CLN8-206ENST00000523237 RNF175Q8N4F7 328 aa15.12■□□□□ 0.01
CLN8-206ENST00000523237 TMEM156Q8N614 296 aa15.12■□□□□ 0.01
CLN8-206ENST00000523237 MORN4Q8NDC4 146 aa15.12■□□□□ 0.01
CLN8-206ENST00000523237 OR14A16Q8NHC5 309 aa15.12■□□□□ 0.01
CLN8-206ENST00000523237 SCYL1Q96KG9 808 aa15.12■□□□□ 0.01
CLN8-206ENST00000523237 GPR137Q96N19 417 aa15.12■□□□□ 0.01
CLN8-206ENST00000523237 ZNF180Q9UJW8 692 aa15.12■□□□□ 0.01
CLN8-206ENST00000523237 TMCO1Q9UM00 188 aa15.12■□□□□ 0.01
CLN8-206ENST00000523237 YARS2Q9Y2Z4 477 aaKnown RBP15.12■□□□□ 0.01
CLN8-206ENST00000523237 PLPP1O14494 284 aa15.11■□□□□ 0.01
CLN8-206ENST00000523237 SIX3O95343 332 aaPredicted RBP15.11■□□□□ 0.01
CLN8-206ENST00000523237 COL6A2P12110 1019 aa15.11■□□□□ 0.01
CLN8-206ENST00000523237 TNNI3P19429 210 aa15.11■□□□□ 0.01
CLN8-206ENST00000523237 PTX3P26022 381 aaPredicted RBP15.11■□□□□ 0.01
CLN8-206ENST00000523237 ARL1P40616 181 aaPredicted RBP15.11■□□□□ 0.01
CLN8-206ENST00000523237 SSR4P51571 173 aa15.11■□□□□ 0.01
CLN8-206ENST00000523237 SLAMF1Q13291 335 aa15.11■□□□□ 0.01
CLN8-206ENST00000523237 ZRSR2Q15696 482 aaKnown RBP15.11■□□□□ 0.01
CLN8-206ENST00000523237 CPSF6Q16630 551 aaKnown RBP eCLIP15.11■□□□□ 0.01
CLN8-206ENST00000523237 HSDL2Q6YN16 418 aa15.11■□□□□ 0.01
CLN8-206ENST00000523237 ZNF227Q86WZ6 799 aa15.11■□□□□ 0.01
CLN8-206ENST00000523237 CYP4Z2PQ8N1L4 340 aa15.11■□□□□ 0.01
CLN8-206ENST00000523237 CEP112Q8N8E3 955 aa15.11■□□□□ 0.01
CLN8-206ENST00000523237 PTGR2Q8N8N7 351 aaPredicted RBP15.11■□□□□ 0.01
CLN8-206ENST00000523237 L3MBTL4Q8NA19 623 aa15.11■□□□□ 0.01
CLN8-206ENST00000523237 UHMK1Q8TAS1 419 aaKnown RBP15.11■□□□□ 0.01
CLN8-206ENST00000523237 PTPMT1Q8WUK0 201 aaPredicted RBP15.11■□□□□ 0.01
CLN8-206ENST00000523237 DCAKDQ8WVC6 231 aa15.11■□□□□ 0.01
CLN8-206ENST00000523237 ATP6V1E2Q96A05 226 aa15.11■□□□□ 0.01
CLN8-206ENST00000523237 PHF21BQ96EK2 531 aa15.11■□□□□ 0.01
CLN8-206ENST00000523237 MAGED4Q96JG8 741 aa15.11■□□□□ 0.01
CLN8-206ENST00000523237 ZNF358Q9NW07 568 aa15.11■□□□□ 0.01
CLN8-206ENST00000523237 SUCOQ9UBS9 1254 aaKnown RBP15.11■□□□□ 0.01
CLN8-206ENST00000523237 PHF11Q9UIL8 331 aa15.11■□□□□ 0.01
CLN8-206ENST00000523237 KLF13Q9Y2Y9 288 aaPredicted RBP15.11■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms