RNA–Protein interactions for RNA: ENST00000522243.5

SDCBP-209, Transcript of syndecan binding protein, humanhuman

TSL 5

Gene SDCBP, Length 556 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-209ENST00000522243 GFAPP14136 432 aa19.27■□□□□ 0.68
SDCBP-209ENST00000522243 ZNF24P17028 368 aa19.27■□□□□ 0.68
SDCBP-209ENST00000522243 TNNI3P19429 210 aa19.27■□□□□ 0.68
SDCBP-209ENST00000522243 GPR85P60893 370 aa19.27■□□□□ 0.68
SDCBP-209ENST00000522243 ELAVL1Q15717 326 aaKnown RBP19.27■□□□□ 0.68
SDCBP-209ENST00000522243 PFKFB4Q16877 469 aa19.27■□□□□ 0.68
SDCBP-209ENST00000522243 FAM83EQ2M2I3 478 aa19.27■□□□□ 0.68
SDCBP-209ENST00000522243 AP5B1Q2VPB7 878 aa19.27■□□□□ 0.68
SDCBP-209ENST00000522243 GRHL2Q6ISB3 625 aa19.27■□□□□ 0.68
SDCBP-209ENST00000522243 CHSY3Q70JA7 882 aa19.27■□□□□ 0.68
SDCBP-209ENST00000522243 SULF2Q8IWU5 870 aa19.27■□□□□ 0.68
SDCBP-209ENST00000522243 CYP4Z2PQ8N1L4 340 aa19.27■□□□□ 0.68
SDCBP-209ENST00000522243 TMEM132CQ8N3T6 1108 aa19.27■□□□□ 0.68
SDCBP-209ENST00000522243 ZNF321PQ8N8H1 164 aa19.27■□□□□ 0.68
SDCBP-209ENST00000522243 ROGDIQ9GZN7 287 aa19.27■□□□□ 0.68
SDCBP-209ENST00000522243 LYRM4Q9HD34 91 aa19.27■□□□□ 0.68
SDCBP-209ENST00000522243 ZNF835Q9Y2P0 537 aa19.27■□□□□ 0.68
SDCBP-209ENST00000522243 KLF13Q9Y2Y9 288 aaPredicted RBP19.27■□□□□ 0.68
SDCBP-209ENST00000522243 CLCA3PQ9Y6N3 262 aa19.27■□□□□ 0.68
SDCBP-209ENST00000522243 SYCE1LA8MT33 242 aa19.26■□□□□ 0.67
SDCBP-209ENST00000522243 HIST1H1TP22492 207 aaPredicted RBP19.26■□□□□ 0.67
SDCBP-209ENST00000522243 CPN2P22792 545 aa19.26■□□□□ 0.67
SDCBP-209ENST00000522243 GRNP28799 593 aaKnown RBP19.26■□□□□ 0.67
SDCBP-209ENST00000522243 TYK2P29597 1187 aa19.26■□□□□ 0.67
SDCBP-209ENST00000522243 PHBP35232 272 aa19.26■□□□□ 0.67
SDCBP-209ENST00000522243 SSR2P43308 183 aa19.26■□□□□ 0.67
SDCBP-209ENST00000522243 SSR4P51571 173 aa19.26■□□□□ 0.67
SDCBP-209ENST00000522243 SETDB1Q15047 1291 aa19.26■□□□□ 0.67
SDCBP-209ENST00000522243 TMEM35AQ53FP2 167 aa19.26■□□□□ 0.67
SDCBP-209ENST00000522243 KHDRBS2Q5VWX1 349 aaKnown RBP19.26■□□□□ 0.67
SDCBP-209ENST00000522243 MDGA2Q7Z553 956 aa19.26■□□□□ 0.67
SDCBP-209ENST00000522243 OR4N5Q8IXE1 308 aa19.26■□□□□ 0.67
SDCBP-209ENST00000522243 GHDCQ8N2G8 530 aa19.26■□□□□ 0.67
SDCBP-209ENST00000522243 RHEBL1Q8TAI7 183 aa19.26■□□□□ 0.67
SDCBP-209ENST00000522243 PTPMT1Q8WUK0 201 aaPredicted RBP19.26■□□□□ 0.67
SDCBP-209ENST00000522243 ZNF592Q92610 1267 aa19.26■□□□□ 0.67
SDCBP-209ENST00000522243 CMTM7Q96FZ5 175 aa19.26■□□□□ 0.67
SDCBP-209ENST00000522243 OR8D2Q9GZM6 311 aa19.26■□□□□ 0.67
SDCBP-209ENST00000522243 VPS11Q9H270 941 aa19.26■□□□□ 0.67
SDCBP-209ENST00000522243 CPSF2Q9P2I0 782 aaKnown RBP19.26■□□□□ 0.67
SDCBP-209ENST00000522243 VTI1BQ9UEU0 232 aa19.26■□□□□ 0.67
SDCBP-209ENST00000522243 SPACA6W5XKT8 324 aa19.26■□□□□ 0.67
SDCBP-209ENST00000522243 TMEM200CA6NKL6 621 aa19.25■□□□□ 0.67
SDCBP-209ENST00000522243 WWP2O00308 870 aa19.25■□□□□ 0.67
SDCBP-209ENST00000522243 PEX1O43933 1283 aa19.25■□□□□ 0.67
SDCBP-209ENST00000522243 OR2J2O76002 312 aa19.25■□□□□ 0.67
SDCBP-209ENST00000522243 KLHL2O95198 593 aa19.25■□□□□ 0.67
SDCBP-209ENST00000522243 ALDOAP04075 364 aaKnown RBP19.25■□□□□ 0.67
SDCBP-209ENST00000522243 ABOP16442 354 aa19.25■□□□□ 0.67
SDCBP-209ENST00000522243 PTGER1P34995 402 aa19.25■□□□□ 0.67
SDCBP-209ENST00000522243 ADORA2A-AS1P86434 159 aa19.25■□□□□ 0.67
SDCBP-209ENST00000522243 SLAMF1Q13291 335 aa19.25■□□□□ 0.67
SDCBP-209ENST00000522243 NAA30Q147X3 362 aaPredicted RBP19.25■□□□□ 0.67
SDCBP-209ENST00000522243 ACAP2Q15057 778 aa19.25■□□□□ 0.67
SDCBP-209ENST00000522243 DEPDC1Q5TB30 811 aa19.25■□□□□ 0.67
SDCBP-209ENST00000522243 OR4C11Q6IEV9 310 aa19.25■□□□□ 0.67
SDCBP-209ENST00000522243 Q6ZPB1 254 aaPredicted RBP19.25■□□□□ 0.67
SDCBP-209ENST00000522243 NCCRP1Q6ZVX7 275 aaPredicted RBP19.25■□□□□ 0.67
SDCBP-209ENST00000522243 LURAP1LQ8IV03 231 aa19.25■□□□□ 0.67
SDCBP-209ENST00000522243 SLC34A3Q8N130 599 aa19.25■□□□□ 0.67
SDCBP-209ENST00000522243 ZNF808Q8N4W9 903 aaPredicted RBP19.25■□□□□ 0.67
SDCBP-209ENST00000522243 HUS1BQ8NHY5 278 aa19.25■□□□□ 0.67
SDCBP-209ENST00000522243 DAZLQ92904 295 aaKnown RBP19.25■□□□□ 0.67
SDCBP-209ENST00000522243 MARVELD3Q96A59 401 aa19.25■□□□□ 0.67
SDCBP-209ENST00000522243 MTERF1Q99551 399 aaKnown RBP19.25■□□□□ 0.67
SDCBP-209ENST00000522243 ACTR8Q9H981 624 aa19.25■□□□□ 0.67
SDCBP-209ENST00000522243 DMGDHQ9UI17 866 aaKnown RBP19.25■□□□□ 0.67
SDCBP-209ENST00000522243 ERVK-11Q9UQG0 969 aa19.25■□□□□ 0.67
SDCBP-209ENST00000522243 ENTPD4Q9Y227 616 aa19.25■□□□□ 0.67
SDCBP-209ENST00000522243 YARS2Q9Y2Z4 477 aaKnown RBP19.25■□□□□ 0.67
SDCBP-209ENST00000522243 GTF3C1Q12789 2109 aa19.25■□□□□ 0.67
SDCBP-209ENST00000522243 C17orf105B2RV13 164 aa19.24■□□□□ 0.67
SDCBP-209ENST00000522243 KLRC4-KLRK1H3BQV0 150 aa19.24■□□□□ 0.67
SDCBP-209ENST00000522243 ACSL3O95573 720 aa19.24■□□□□ 0.67
SDCBP-209ENST00000522243 SERPINB8P50452 374 aa19.24■□□□□ 0.67
SDCBP-209ENST00000522243 RAP1GDS1P52306 607 aa19.24■□□□□ 0.67
SDCBP-209ENST00000522243 ALDH18A1P54886 795 aaKnown RBP19.24■□□□□ 0.67
SDCBP-209ENST00000522243 RPS13P62277 151 aaKnown RBP19.24■□□□□ 0.67
SDCBP-209ENST00000522243 PCDH1Q08174 1060 aa19.24■□□□□ 0.67
SDCBP-209ENST00000522243 ART3Q13508 389 aa19.24■□□□□ 0.67
SDCBP-209ENST00000522243 SERTAD2Q14140 314 aa19.24■□□□□ 0.67
SDCBP-209ENST00000522243 WHAMMP3Q1A5X7 153 aa19.24■□□□□ 0.67
SDCBP-209ENST00000522243 MTFR2Q6P444 385 aa19.24■□□□□ 0.67
SDCBP-209ENST00000522243 KLC3Q6P597 504 aa19.24■□□□□ 0.67
SDCBP-209ENST00000522243 IL20RBQ6UXL0 311 aa19.24■□□□□ 0.67
SDCBP-209ENST00000522243 HSDL2Q6YN16 418 aa19.24■□□□□ 0.67
SDCBP-209ENST00000522243 CCDC91Q7Z6B0 441 aa19.24■□□□□ 0.67
SDCBP-209ENST00000522243 PLD6Q8N2A8 252 aaKnown RBP19.24■□□□□ 0.67
SDCBP-209ENST00000522243 MORN4Q8NDC4 146 aa19.24■□□□□ 0.67
SDCBP-209ENST00000522243 OR14A16Q8NHC5 309 aa19.24■□□□□ 0.67
SDCBP-209ENST00000522243 ASB15Q8WXK1 588 aa19.24■□□□□ 0.67
SDCBP-209ENST00000522243 ANKRD9Q96BM1 317 aaPredicted RBP19.24■□□□□ 0.67
SDCBP-209ENST00000522243 GPR78Q96P69 363 aa19.24■□□□□ 0.67
SDCBP-209ENST00000522243 CDC42EP4Q9H3Q1 356 aaKnown RBP19.24■□□□□ 0.67
SDCBP-209ENST00000522243 ACSS3Q9H6R3 686 aa19.24■□□□□ 0.67
SDCBP-209ENST00000522243 DMRT3Q9NQL9 472 aa19.24■□□□□ 0.67
SDCBP-209ENST00000522243 ZNF358Q9NW07 568 aa19.24■□□□□ 0.67
SDCBP-209ENST00000522243 MTRF1LQ9UGC7 380 aaKnown RBP19.24■□□□□ 0.67
SDCBP-209ENST00000522243 EML6Q6ZMW3 1958 aa19.23■□□□□ 0.67
SDCBP-209ENST00000522243 A8MVJ9 347 aa19.23■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms