RNA–Protein interactions for RNA: ENST00000522122.1

SYNPO-205, Transcript of synaptopodin, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene SYNPO, Length 5,098 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPO-205ENST00000522122 TBC1D15Q8TC07 691 aa13.28□□□□□ -0.28
SYNPO-205ENST00000522122 PIP5K1AQ99755 562 aa13.28□□□□□ -0.28
SYNPO-205ENST00000522122 SMG9Q9H0W8 520 aaKnown RBP13.28□□□□□ -0.28
SYNPO-205ENST00000522122 GORASP2Q9H8Y8 452 aa13.28□□□□□ -0.28
SYNPO-205ENST00000522122 H7BY64 318 aa13.27□□□□□ -0.28
SYNPO-205ENST00000522122 J3QLW9 94 aa13.27□□□□□ -0.28
SYNPO-205ENST00000522122 GSRP00390 522 aa13.27□□□□□ -0.28
SYNPO-205ENST00000522122 PIM1P11309 404 aaPredicted RBP13.27□□□□□ -0.28
SYNPO-205ENST00000522122 ZNF19P17023 458 aa13.27□□□□□ -0.28
SYNPO-205ENST00000522122 IST1P53990 364 aa13.27□□□□□ -0.28
SYNPO-205ENST00000522122 TSPAN5P62079 268 aa13.27□□□□□ -0.28
SYNPO-205ENST00000522122 NEK7Q8TDX7 302 aa13.27□□□□□ -0.28
SYNPO-205ENST00000522122 PRAP1Q96NZ9 151 aa13.27□□□□□ -0.28
SYNPO-205ENST00000522122 ATOH8Q96SQ7 321 aa13.27□□□□□ -0.28
SYNPO-205ENST00000522122 SPATA9Q9BWV2 254 aa13.27□□□□□ -0.28
SYNPO-205ENST00000522122 DPAGT1Q9H3H5 408 aa13.27□□□□□ -0.28
SYNPO-205ENST00000522122 PLAGL1Q9UM63 463 aa13.27□□□□□ -0.28
SYNPO-205ENST00000522122 A0A1W2PRQ8 180 aa13.27□□□□□ -0.29
SYNPO-205ENST00000522122 F8A1P23610 371 aa13.27□□□□□ -0.29
SYNPO-205ENST00000522122 BLKP51451 505 aa13.27□□□□□ -0.29
SYNPO-205ENST00000522122 PON3Q15166 354 aa13.27□□□□□ -0.29
SYNPO-205ENST00000522122 MFSD6LQ8IWD5 586 aa13.27□□□□□ -0.29
SYNPO-205ENST00000522122 PRSS58Q8IYP2 241 aa13.27□□□□□ -0.29
SYNPO-205ENST00000522122 OSTF1Q92882 214 aa13.27□□□□□ -0.29
SYNPO-205ENST00000522122 C17orf62Q9BQA9 187 aa13.27□□□□□ -0.29
SYNPO-205ENST00000522122 DPH2Q9BQC3 489 aaPredicted RBP13.27□□□□□ -0.29
SYNPO-205ENST00000522122 RC3H2Q9HBD1 1191 aaKnown RBP13.27□□□□□ -0.29
SYNPO-205ENST00000522122 BAIAP2Q9UQB8 552 aa13.27□□□□□ -0.29
SYNPO-205ENST00000522122 A0A1W2PQ45 241 aaPredicted RBP13.27□□□□□ -0.29
SYNPO-205ENST00000522122 A0A1W2PQY0 241 aa13.27□□□□□ -0.29
SYNPO-205ENST00000522122 CD47Q08722 323 aa13.27□□□□□ -0.29
SYNPO-205ENST00000522122 SWI5Q1ZZU3 235 aa13.27□□□□□ -0.29
SYNPO-205ENST00000522122 EXOC3L2Q2M3D2 409 aa13.27□□□□□ -0.29
SYNPO-205ENST00000522122 TMEM53Q6P2H8 277 aa13.27□□□□□ -0.29
SYNPO-205ENST00000522122 GALNT12Q8IXK2 581 aa13.27□□□□□ -0.29
SYNPO-205ENST00000522122 WACQ9BTA9 647 aa13.27□□□□□ -0.29
SYNPO-205ENST00000522122 BRD7Q9NPI1 651 aa13.27□□□□□ -0.29
SYNPO-205ENST00000522122 HEBP1Q9NRV9 189 aa13.27□□□□□ -0.29
SYNPO-205ENST00000522122 NLGN3Q9NZ94 848 aa13.27□□□□□ -0.29
SYNPO-205ENST00000522122 COPS7AQ9UBW8 275 aa13.27□□□□□ -0.29
SYNPO-205ENST00000522122 EXOSC1Q9Y3B2 195 aaKnown RBP13.27□□□□□ -0.29
SYNPO-205ENST00000522122 SMIM30A4D0T7 59 aa13.27□□□□□ -0.29
SYNPO-205ENST00000522122 TMEM150CB9EJG8 249 aa13.27□□□□□ -0.29
SYNPO-205ENST00000522122 M0QZQ0 153 aa13.27□□□□□ -0.29
SYNPO-205ENST00000522122 S100GP29377 79 aa13.27□□□□□ -0.29
SYNPO-205ENST00000522122 ZNF805Q5CZA5 627 aa13.27□□□□□ -0.29
SYNPO-205ENST00000522122 NCEH1Q6PIU2 408 aa13.27□□□□□ -0.29
SYNPO-205ENST00000522122 OR52E4Q8NGH9 312 aa13.27□□□□□ -0.29
SYNPO-205ENST00000522122 BPIFB1Q8TDL5 484 aa13.27□□□□□ -0.29
SYNPO-205ENST00000522122 MCHR1Q99705 422 aa13.27□□□□□ -0.29
SYNPO-205ENST00000522122 PLEKHA1Q9HB21 404 aa13.27□□□□□ -0.29
SYNPO-205ENST00000522122 OR14I1A6ND48 311 aa13.26□□□□□ -0.29
SYNPO-205ENST00000522122 MROH6A6NGR9 719 aa13.26□□□□□ -0.29
SYNPO-205ENST00000522122 FAM155AB1AL88 458 aaPredicted RBP13.26□□□□□ -0.29
SYNPO-205ENST00000522122 ITGAMP11215 1152 aa13.26□□□□□ -0.29
SYNPO-205ENST00000522122 HK1P19367 917 aa13.26□□□□□ -0.29
SYNPO-205ENST00000522122 CRHBPP24387 322 aa13.26□□□□□ -0.29
SYNPO-205ENST00000522122 EDNRAP25101 427 aa13.26□□□□□ -0.29
SYNPO-205ENST00000522122 MSANTD1Q6ZTZ1 278 aa13.26□□□□□ -0.29
SYNPO-205ENST00000522122 NUP54Q7Z3B4 507 aa13.26□□□□□ -0.29
SYNPO-205ENST00000522122 TSPYL5Q86VY4 417 aaPredicted RBP13.26□□□□□ -0.29
SYNPO-205ENST00000522122 PTRH1Q86Y79 214 aaKnown RBP13.26□□□□□ -0.29
SYNPO-205ENST00000522122 TRAM1L1Q8N609 369 aa13.26□□□□□ -0.29
SYNPO-205ENST00000522122 OR8J1Q8NGP2 316 aa13.26□□□□□ -0.29
SYNPO-205ENST00000522122 LRRC20Q8TCA0 184 aa13.26□□□□□ -0.29
SYNPO-205ENST00000522122 SH3YL1Q96HL8 342 aaPredicted RBP13.26□□□□□ -0.29
SYNPO-205ENST00000522122 KXD1Q9BQD3 176 aa13.26□□□□□ -0.29
SYNPO-205ENST00000522122 ZNF385DQ9H6B1 395 aa13.26□□□□□ -0.29
SYNPO-205ENST00000522122 LOC285095A0A1B0GVY8 99 aa13.26□□□□□ -0.29
SYNPO-205ENST00000522122 GLOD5A6NK44 160 aa13.26□□□□□ -0.29
SYNPO-205ENST00000522122 RHPN2P1A8MT19 583 aa13.26□□□□□ -0.29
SYNPO-205ENST00000522122 ARHGEF15O94989 841 aa13.26□□□□□ -0.29
SYNPO-205ENST00000522122 CSF2P04141 144 aa13.26□□□□□ -0.29
SYNPO-205ENST00000522122 CELP19835 753 aa13.26□□□□□ -0.29
SYNPO-205ENST00000522122 ARF5P84085 180 aa13.26□□□□□ -0.29
SYNPO-205ENST00000522122 HNRNPA0Q13151 305 aaKnown RBP13.26□□□□□ -0.29
SYNPO-205ENST00000522122 KEAP1Q14145 624 aa13.26□□□□□ -0.29
SYNPO-205ENST00000522122 SCD5Q86SK9 330 aa13.26□□□□□ -0.29
SYNPO-205ENST00000522122 OR13F1Q8NGS4 319 aa13.26□□□□□ -0.29
SYNPO-205ENST00000522122 K7ERQ8 282 aa13.26□□□□□ -0.29
SYNPO-205ENST00000522122 UBFD1O14562 309 aaKnown RBP13.26□□□□□ -0.29
SYNPO-205ENST00000522122 IL3P08700 152 aa13.26□□□□□ -0.29
SYNPO-205ENST00000522122 STSP08842 583 aa13.26□□□□□ -0.29
SYNPO-205ENST00000522122 HLA-EP13747 358 aa13.26□□□□□ -0.29
SYNPO-205ENST00000522122 ENPP2Q13822 863 aa13.26□□□□□ -0.29
SYNPO-205ENST00000522122 FBXO42Q6P3S6 717 aa13.26□□□□□ -0.29
SYNPO-205ENST00000522122 QSOX2Q6ZRP7 698 aa13.26□□□□□ -0.29
SYNPO-205ENST00000522122 SLC37A3Q8NCC5 494 aa13.26□□□□□ -0.29
SYNPO-205ENST00000522122 OR4E2Q8NGC2 313 aa13.26□□□□□ -0.29
SYNPO-205ENST00000522122 PMEPA1Q969W9 287 aa13.26□□□□□ -0.29
SYNPO-205ENST00000522122 FEVQ99581 238 aa13.26□□□□□ -0.29
SYNPO-205ENST00000522122 MED11Q9P086 117 aa13.26□□□□□ -0.29
SYNPO-205ENST00000522122 PCDHGB5Q9Y5G0 923 aa13.26□□□□□ -0.29
SYNPO-205ENST00000522122 SPO11Q9Y5K1 396 aa13.26□□□□□ -0.29
SYNPO-205ENST00000522122 KRBA1A5PL33 1030 aa13.26□□□□□ -0.29
SYNPO-205ENST00000522122 FAAHO00519 579 aa13.26□□□□□ -0.29
SYNPO-205ENST00000522122 GABBR2O75899 941 aa13.26□□□□□ -0.29
SYNPO-205ENST00000522122 CKMT1AP12532 417 aa13.26□□□□□ -0.29
SYNPO-205ENST00000522122 HOXC13P31276 330 aa13.26□□□□□ -0.29
SYNPO-205ENST00000522122 SLC27A4Q6P1M0 643 aa13.26□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 47.2 ms