RNA–Protein interactions for RNA: ENST00000521387.1

CTNNA1-227, Transcript of catenin alpha 1, humanhuman

TSL 2

Gene CTNNA1, Length 871 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-227ENST00000521387 RAP1GDS1P52306 607 aa6.85□□□□□ -1.31
CTNNA1-227ENST00000521387 NR1H2P55055 460 aa6.85□□□□□ -1.31
CTNNA1-227ENST00000521387 NSUN2Q08J23 767 aaKnown RBP eCLIP6.85□□□□□ -1.31
CTNNA1-227ENST00000521387 ASPHQ12797 758 aa6.85□□□□□ -1.31
CTNNA1-227ENST00000521387 TRAF2Q12933 501 aa6.85□□□□□ -1.31
CTNNA1-227ENST00000521387 KLF10Q13118 480 aa6.85□□□□□ -1.31
CTNNA1-227ENST00000521387 PRKAA1Q13131 559 aa6.85□□□□□ -1.31
CTNNA1-227ENST00000521387 RFTN1Q14699 578 aaPredicted RBP6.85□□□□□ -1.31
CTNNA1-227ENST00000521387 KPNB1Q14974 876 aaKnown RBP6.85□□□□□ -1.31
CTNNA1-227ENST00000521387 POU4F3Q15319 338 aa6.85□□□□□ -1.31
CTNNA1-227ENST00000521387 TAF1AQ15573 450 aaPredicted RBP6.85□□□□□ -1.31
CTNNA1-227ENST00000521387 TBCCQ15814 346 aa6.85□□□□□ -1.31
CTNNA1-227ENST00000521387 PDCD2Q16342 344 aaPredicted RBP6.85□□□□□ -1.31
CTNNA1-227ENST00000521387 KHDC1Q4VXA5 237 aaKnown RBP6.85□□□□□ -1.31
CTNNA1-227ENST00000521387 ACSBG2Q5FVE4 666 aa6.85□□□□□ -1.31
CTNNA1-227ENST00000521387 CFAP157Q5JU67 520 aa6.85□□□□□ -1.31
CTNNA1-227ENST00000521387 FAM45BPQ6NSW5 357 aa6.85□□□□□ -1.31
CTNNA1-227ENST00000521387 CRTC3Q6UUV7 619 aa6.85□□□□□ -1.31
CTNNA1-227ENST00000521387 RPS27LQ71UM5 84 aaKnown RBP6.85□□□□□ -1.31
CTNNA1-227ENST00000521387 OVCH1Q7RTY7 1134 aa6.85□□□□□ -1.31
CTNNA1-227ENST00000521387 LMNTD2Q8IXW0 634 aa6.85□□□□□ -1.31
CTNNA1-227ENST00000521387 SHISA5Q8N114 240 aa6.85□□□□□ -1.31
CTNNA1-227ENST00000521387 CCNYL1Q8N7R7 359 aa6.85□□□□□ -1.31
CTNNA1-227ENST00000521387 LPCAT1Q8NF37 534 aa6.85□□□□□ -1.31
CTNNA1-227ENST00000521387 OR4L1Q8NH43 312 aa6.85□□□□□ -1.31
CTNNA1-227ENST00000521387 SGMS2Q8NHU3 365 aa6.85□□□□□ -1.31
CTNNA1-227ENST00000521387 SUN3Q8TAQ9 357 aa6.85□□□□□ -1.31
CTNNA1-227ENST00000521387 FAM45AQ8TCE6 357 aa6.85□□□□□ -1.31
CTNNA1-227ENST00000521387 AGR3Q8TD06 166 aa6.85□□□□□ -1.31
CTNNA1-227ENST00000521387 WDR60Q8WVS4 1066 aa6.85□□□□□ -1.31
CTNNA1-227ENST00000521387 ZDHHC19Q8WVZ1 309 aaPredicted RBP6.85□□□□□ -1.31
CTNNA1-227ENST00000521387 SCRN2Q96FV2 425 aa6.85□□□□□ -1.31
CTNNA1-227ENST00000521387 TSPAN17Q96FV3 270 aa6.85□□□□□ -1.31
CTNNA1-227ENST00000521387 CLPTM1LQ96KA5 538 aa6.85□□□□□ -1.31
CTNNA1-227ENST00000521387 UBXN10Q96LJ8 280 aa6.85□□□□□ -1.31
CTNNA1-227ENST00000521387 NRTNQ99748 197 aa6.85□□□□□ -1.31
CTNNA1-227ENST00000521387 AARSD1Q9BTE6 412 aaKnown RBP6.85□□□□□ -1.31
CTNNA1-227ENST00000521387 THTPAQ9BU02 230 aa6.85□□□□□ -1.31
CTNNA1-227ENST00000521387 KLHL25Q9H0H3 589 aa6.85□□□□□ -1.31
CTNNA1-227ENST00000521387 SOX17Q9H6I2 414 aaPredicted RBP6.85□□□□□ -1.31
CTNNA1-227ENST00000521387 WDR55Q9H6Y2 383 aaPredicted RBP6.85□□□□□ -1.31
CTNNA1-227ENST00000521387 RNPEPL1Q9HAU8 725 aa6.85□□□□□ -1.31
CTNNA1-227ENST00000521387 KLHL1Q9NR64 748 aa6.85□□□□□ -1.31
CTNNA1-227ENST00000521387 CATSPERZQ9NTU4 200 aa6.85□□□□□ -1.31
CTNNA1-227ENST00000521387 SDAD1Q9NVU7 687 aaKnown RBP eCLIP6.85□□□□□ -1.312e-6■■■□□ 16.1
CTNNA1-227ENST00000521387 NLE1Q9NVX2 485 aaPredicted RBP6.85□□□□□ -1.31
CTNNA1-227ENST00000521387 POMT2Q9UKY4 750 aa6.85□□□□□ -1.31
CTNNA1-227ENST00000521387 CRYL1Q9Y2S2 319 aa6.85□□□□□ -1.31
CTNNA1-227ENST00000521387 SEC23IPQ9Y6Y8 1000 aaKnown RBP6.85□□□□□ -1.31
CTNNA1-227ENST00000521387 ZNF407Q9C0G0 2248 aa6.84□□□□□ -1.31
CTNNA1-227ENST00000521387 VSTM2BA6NLU5 285 aa6.84□□□□□ -1.31
CTNNA1-227ENST00000521387 CLCA1A8K7I4 914 aa6.84□□□□□ -1.31
CTNNA1-227ENST00000521387 E9PBE3 544 aa6.84□□□□□ -1.31
CTNNA1-227ENST00000521387 SDHDO14521 159 aa6.84□□□□□ -1.31
CTNNA1-227ENST00000521387 HDAC3O15379 428 aa6.84□□□□□ -1.31
CTNNA1-227ENST00000521387 CRTAMO95727 393 aa6.84□□□□□ -1.31
CTNNA1-227ENST00000521387 MLYCDO95822 493 aa6.84□□□□□ -1.31
CTNNA1-227ENST00000521387 JUNP05412 331 aaKnown RBP6.84□□□□□ -1.31
CTNNA1-227ENST00000521387 RBP1P09455 135 aa6.84□□□□□ -1.31
CTNNA1-227ENST00000521387 TPBGLP0DKB5 382 aa6.84□□□□□ -1.31
CTNNA1-227ENST00000521387 ITGAMP11215 1152 aa6.84□□□□□ -1.31
CTNNA1-227ENST00000521387 COX6A1P12074 109 aa6.84□□□□□ -1.31
CTNNA1-227ENST00000521387 COX4I1P13073 169 aa6.84□□□□□ -1.31
CTNNA1-227ENST00000521387 ZNF7P17097 686 aaPredicted RBP6.84□□□□□ -1.31
CTNNA1-227ENST00000521387 CTPS1P17812 591 aa6.84□□□□□ -1.31
CTNNA1-227ENST00000521387 OGNP20774 298 aaKnown RBP6.84□□□□□ -1.31
CTNNA1-227ENST00000521387 CES1P23141 567 aa6.84□□□□□ -1.31
CTNNA1-227ENST00000521387 TACR1P25103 407 aa6.84□□□□□ -1.31
CTNNA1-227ENST00000521387 PRDX6P30041 224 aa6.84□□□□□ -1.31
CTNNA1-227ENST00000521387 FMO4P31512 558 aa6.84□□□□□ -1.31
CTNNA1-227ENST00000521387 CDKN1CP49918 316 aaPredicted RBP6.84□□□□□ -1.31
CTNNA1-227ENST00000521387 HK2P52789 917 aa6.84□□□□□ -1.31
CTNNA1-227ENST00000521387 MXRA7P84157 204 aa6.84□□□□□ -1.31
CTNNA1-227ENST00000521387 SLC25A3Q00325 362 aa6.84□□□□□ -1.31
CTNNA1-227ENST00000521387 ACAP2Q15057 778 aa6.84□□□□□ -1.31
CTNNA1-227ENST00000521387 RPE65Q16518 533 aa6.84□□□□□ -1.31
CTNNA1-227ENST00000521387 RBBP7Q16576 425 aa6.84□□□□□ -1.31
CTNNA1-227ENST00000521387 FAM83EQ2M2I3 478 aa6.84□□□□□ -1.31
CTNNA1-227ENST00000521387 TYSND1Q2T9J0 566 aa6.84□□□□□ -1.31
CTNNA1-227ENST00000521387 LSM12Q3MHD2 195 aaKnown RBP6.84□□□□□ -1.31
CTNNA1-227ENST00000521387 UNC50Q53HI1 259 aa6.84□□□□□ -1.31
CTNNA1-227ENST00000521387 FAM219BQ5XKK7 198 aa6.84□□□□□ -1.31
CTNNA1-227ENST00000521387 LRRC66Q68CR7 880 aa6.84□□□□□ -1.31
CTNNA1-227ENST00000521387 KLHL35Q6PF15 583 aa6.84□□□□□ -1.31
CTNNA1-227ENST00000521387 PNPLA5Q7Z6Z6 429 aaPredicted RBP6.84□□□□□ -1.31
CTNNA1-227ENST00000521387 ADGRG6Q86SQ4 1221 aa6.84□□□□□ -1.31
CTNNA1-227ENST00000521387 ISCA2Q86U28 154 aa6.84□□□□□ -1.31
CTNNA1-227ENST00000521387 MEX3DQ86XN8 651 aaKnown RBP6.84□□□□□ -1.31
CTNNA1-227ENST00000521387 SCUBE1Q8IWY4 988 aa6.84□□□□□ -1.31
CTNNA1-227ENST00000521387 ZNF655Q8N720 491 aaPredicted RBP6.84□□□□□ -1.31
CTNNA1-227ENST00000521387 OR4K2Q8NGD2 314 aa6.84□□□□□ -1.31
CTNNA1-227ENST00000521387 LINC01560Q8TB33 94 aa6.84□□□□□ -1.31
CTNNA1-227ENST00000521387 PEX13Q92968 403 aa6.84□□□□□ -1.31
CTNNA1-227ENST00000521387 MCUR1Q96AQ8 359 aa6.84□□□□□ -1.31
CTNNA1-227ENST00000521387 PPP1R36Q96LQ0 422 aa6.84□□□□□ -1.31
CTNNA1-227ENST00000521387 CCDC28BQ9BUN5 200 aa6.84□□□□□ -1.31
CTNNA1-227ENST00000521387 SARGQ9BW04 601 aa6.84□□□□□ -1.31
CTNNA1-227ENST00000521387 TDRD1Q9BXT4 1180 aaKnown RBP6.84□□□□□ -1.31
CTNNA1-227ENST00000521387 NUF2Q9BZD4 464 aa6.84□□□□□ -1.31
CTNNA1-227ENST00000521387 OR2AG1Q9H205 316 aa6.84□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 57 ms