RNA–Protein interactions for RNA: ENST00000520880.1

CTHRC1-204, Transcript of collagen triple helix repeat containing 1, humanhuman

TSL 4 BASIC

Gene CTHRC1, Length 560 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTHRC1-204ENST00000520880 NAP1L3Q99457 506 aaPredicted RBP3.53□□□□□ -1.84
CTHRC1-204ENST00000520880 ADPGKQ9BRR6 497 aa3.53□□□□□ -1.84
CTHRC1-204ENST00000520880 GCOM2Q9BZD3 368 aaPredicted RBP3.53□□□□□ -1.84
CTHRC1-204ENST00000520880 ELOVL4Q9GZR5 314 aa3.53□□□□□ -1.84
CTHRC1-204ENST00000520880 FAM49AQ9H0Q0 323 aaPredicted RBP3.53□□□□□ -1.84
CTHRC1-204ENST00000520880 NEUROG2Q9H2A3 272 aa3.53□□□□□ -1.84
CTHRC1-204ENST00000520880 CXCL16Q9H2A7 254 aa3.53□□□□□ -1.84
CTHRC1-204ENST00000520880 ASB7Q9H672 318 aa3.53□□□□□ -1.84
CTHRC1-204ENST00000520880 ACKR4Q9NPB9 350 aa3.53□□□□□ -1.84
CTHRC1-204ENST00000520880 ADAM22Q9P0K1 906 aa3.53□□□□□ -1.84
CTHRC1-204ENST00000520880 HMGXB4Q9UGU5 601 aa3.53□□□□□ -1.84
CTHRC1-204ENST00000520880 AMACRQ9UHK6 382 aa3.53□□□□□ -1.84
CTHRC1-204ENST00000520880 FAM153AQ9UHL3 310 aa3.53□□□□□ -1.84
CTHRC1-204ENST00000520880 ITGA11Q9UKX5 1188 aa3.53□□□□□ -1.84
CTHRC1-204ENST00000520880 Q9Y3F1 56 aa3.53□□□□□ -1.84
CTHRC1-204ENST00000520880 MYO16Q9Y6X6 1858 aa3.53□□□□□ -1.84
CTHRC1-204ENST00000520880 CENPFP49454 3210 aa3.52□□□□□ -1.85
CTHRC1-204ENST00000520880 TANC1Q9C0D5 1861 aa3.52□□□□□ -1.85
CTHRC1-204ENST00000520880 A0A0U1RQG5 324 aaPredicted RBP3.52□□□□□ -1.85
CTHRC1-204ENST00000520880 O00370 1275 aa3.52□□□□□ -1.85
CTHRC1-204ENST00000520880 SCAMP1O15126 338 aa3.52□□□□□ -1.85
CTHRC1-204ENST00000520880 POLR3GO15318 223 aaPredicted RBP3.52□□□□□ -1.85
CTHRC1-204ENST00000520880 PSTPIP1O43586 416 aa3.52□□□□□ -1.85
CTHRC1-204ENST00000520880 GPC4O75487 556 aa3.52□□□□□ -1.85
CTHRC1-204ENST00000520880 KHDRBS3O75525 346 aaKnown RBP3.52□□□□□ -1.85
CTHRC1-204ENST00000520880 PROSCO94903 275 aa3.52□□□□□ -1.85
CTHRC1-204ENST00000520880 EIF2S1P05198 315 aaKnown RBP3.52□□□□□ -1.85
CTHRC1-204ENST00000520880 CALB1P05937 261 aa3.52□□□□□ -1.85
CTHRC1-204ENST00000520880 PAEPP09466 180 aa3.52□□□□□ -1.85
CTHRC1-204ENST00000520880 CYBAP13498 195 aa3.52□□□□□ -1.85
CTHRC1-204ENST00000520880 CYP3A5P20815 502 aa3.52□□□□□ -1.85
CTHRC1-204ENST00000520880 AXLP30530 894 aa3.52□□□□□ -1.85
CTHRC1-204ENST00000520880 MAN1A1P33908 653 aa3.52□□□□□ -1.85
CTHRC1-204ENST00000520880 HSPA9P38646 679 aaKnown RBP3.52□□□□□ -1.85
CTHRC1-204ENST00000520880 SLC1A1P43005 524 aa3.52□□□□□ -1.85
CTHRC1-204ENST00000520880 MAGEA11P43364 429 aa3.52□□□□□ -1.85
CTHRC1-204ENST00000520880 CDH8P55286 799 aa3.52□□□□□ -1.85
CTHRC1-204ENST00000520880 GSCP56915 257 aaPredicted RBP3.52□□□□□ -1.85
CTHRC1-204ENST00000520880 RWDD2BP57060 319 aa3.52□□□□□ -1.85
CTHRC1-204ENST00000520880 PPP2R2BQ00005 443 aa3.52□□□□□ -1.85
CTHRC1-204ENST00000520880 DR1Q01658 176 aa3.52□□□□□ -1.85
CTHRC1-204ENST00000520880 OGDHQ02218 1023 aa3.52□□□□□ -1.85
CTHRC1-204ENST00000520880 INCA1Q0VD86 236 aa3.52□□□□□ -1.85
CTHRC1-204ENST00000520880 CUL1Q13616 776 aa3.52□□□□□ -1.85
CTHRC1-204ENST00000520880 ZBTB6Q15916 424 aa3.52□□□□□ -1.85
CTHRC1-204ENST00000520880 KCTD19Q17RG1 926 aaPredicted RBP3.52□□□□□ -1.85
CTHRC1-204ENST00000520880 PCGF3Q3KNV8 242 aa3.52□□□□□ -1.85
CTHRC1-204ENST00000520880 GLIPR1L2Q4G1C9 344 aa3.52□□□□□ -1.85
CTHRC1-204ENST00000520880 PTPN20Q4JDL3 420 aa3.52□□□□□ -1.85
CTHRC1-204ENST00000520880 FASTKD1Q53R41 847 aaKnown RBP3.52□□□□□ -1.85
CTHRC1-204ENST00000520880 GCNT6Q5T4J0 391 aa3.52□□□□□ -1.85
CTHRC1-204ENST00000520880 LIN9Q5TKA1 542 aa3.52□□□□□ -1.85
CTHRC1-204ENST00000520880 DUPD1Q68J44 220 aa3.52□□□□□ -1.85
CTHRC1-204ENST00000520880 TTC27Q6P3X3 843 aa3.52□□□□□ -1.85
CTHRC1-204ENST00000520880 NOTUMQ6P988 496 aa3.52□□□□□ -1.85
CTHRC1-204ENST00000520880 PAQR6Q6TCH4 344 aa3.52□□□□□ -1.85
CTHRC1-204ENST00000520880 ALKAL1Q6UXT8 129 aa3.52□□□□□ -1.85
CTHRC1-204ENST00000520880 CFAP77Q6ZQR2 320 aa3.52□□□□□ -1.85
CTHRC1-204ENST00000520880 CATSPER4Q7RTX7 472 aa3.52□□□□□ -1.85
CTHRC1-204ENST00000520880 MAATS1Q7Z4T9 603 aa3.52□□□□□ -1.85
CTHRC1-204ENST00000520880 SLC13A5Q86YT5 568 aaPredicted RBP3.52□□□□□ -1.85
CTHRC1-204ENST00000520880 LMNTD2Q8IXW0 634 aa3.52□□□□□ -1.85
CTHRC1-204ENST00000520880 WDTC1Q8N5D0 677 aa3.52□□□□□ -1.85
CTHRC1-204ENST00000520880 PRELID2Q8N945 189 aa3.52□□□□□ -1.85
CTHRC1-204ENST00000520880 SLC4A11Q8NBS3 891 aa3.52□□□□□ -1.85
CTHRC1-204ENST00000520880 TMEM35BQ8NCS4 154 aa3.52□□□□□ -1.85
CTHRC1-204ENST00000520880 OR1J1Q8NGS3 322 aa3.52□□□□□ -1.85
CTHRC1-204ENST00000520880 OR4C3Q8NH37 302 aa3.52□□□□□ -1.85
CTHRC1-204ENST00000520880 CCDC26Q8TAB7 109 aa3.52□□□□□ -1.85
CTHRC1-204ENST00000520880 ZFAND2BQ8WV99 257 aa3.52□□□□□ -1.85
CTHRC1-204ENST00000520880 DNAJB3Q8WWF6 145 aa3.52□□□□□ -1.85
CTHRC1-204ENST00000520880 IFT81Q8WYA0 676 aa3.52□□□□□ -1.85
CTHRC1-204ENST00000520880 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP3.52□□□□□ -1.85
CTHRC1-204ENST00000520880 OMA1Q96E52 524 aa3.52□□□□□ -1.85
CTHRC1-204ENST00000520880 ZMAT2Q96NC0 199 aaKnown RBP3.52□□□□□ -1.85
CTHRC1-204ENST00000520880 FOXN4Q96NZ1 517 aa3.52□□□□□ -1.85
CTHRC1-204ENST00000520880 ZIM3Q96PE6 472 aa3.52□□□□□ -1.85
CTHRC1-204ENST00000520880 CPXM1Q96SM3 734 aa3.52□□□□□ -1.85
CTHRC1-204ENST00000520880 DDOQ99489 341 aa3.52□□□□□ -1.85
CTHRC1-204ENST00000520880 PIGQQ9BRB3 760 aa3.52□□□□□ -1.85
CTHRC1-204ENST00000520880 TRAF4Q9BUZ4 470 aaPredicted RBP3.52□□□□□ -1.85
CTHRC1-204ENST00000520880 CLEC7AQ9BXN2 247 aa3.52□□□□□ -1.85
CTHRC1-204ENST00000520880 RAB17Q9H0T7 212 aa3.52□□□□□ -1.85
CTHRC1-204ENST00000520880 UPF3AQ9H1J1 476 aaKnown RBP3.52□□□□□ -1.85
CTHRC1-204ENST00000520880 LHX5Q9H2C1 402 aa3.52□□□□□ -1.85
CTHRC1-204ENST00000520880 NXF3Q9H4D5 531 aaKnown RBP3.52□□□□□ -1.85
CTHRC1-204ENST00000520880 CYP3A43Q9HB55 503 aa3.52□□□□□ -1.85
CTHRC1-204ENST00000520880 MRPL47Q9HD33 250 aaKnown RBP3.52□□□□□ -1.85
CTHRC1-204ENST00000520880 MED4Q9NPJ6 270 aa3.52□□□□□ -1.85
CTHRC1-204ENST00000520880 PARVAQ9NVD7 372 aa3.52□□□□□ -1.85
CTHRC1-204ENST00000520880 FAM120CQ9NX05 1096 aaKnown RBP3.52□□□□□ -1.85
CTHRC1-204ENST00000520880 DPP3Q9NY33 737 aa3.52□□□□□ -1.85
CTHRC1-204ENST00000520880 TUBGCP4Q9UGJ1 667 aa3.52□□□□□ -1.85
CTHRC1-204ENST00000520880 PCYOX1Q9UHG3 505 aa3.52□□□□□ -1.85
CTHRC1-204ENST00000520880 CYTH4Q9UIA0 394 aa3.52□□□□□ -1.85
CTHRC1-204ENST00000520880 GINS2Q9Y248 185 aa3.52□□□□□ -1.85
CTHRC1-204ENST00000520880 HES2Q9Y543 173 aa3.52□□□□□ -1.85
CTHRC1-204ENST00000520880 SPIN1Q9Y657 262 aaPredicted RBP3.52□□□□□ -1.85
CTHRC1-204ENST00000520880 COL4A4P53420 1690 aaPredicted RBP3.52□□□□□ -1.85
CTHRC1-204ENST00000520880 M0QYV0 167 aa3.51□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 54 ms