RNA–Protein interactions for RNA: ENST00000520339.5

CTNNA1-221, Transcript of catenin alpha 1, humanhuman

TSL 3

Gene CTNNA1, Length 868 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-221ENST00000520339 SCMH1Q96GD3 660 aa8.69□□□□□ -1.02
CTNNA1-221ENST00000520339 SMIM10Q96HG1 83 aa8.69□□□□□ -1.02
CTNNA1-221ENST00000520339 COX4I2Q96KJ9 171 aa8.69□□□□□ -1.02
CTNNA1-221ENST00000520339 SIGLEC12Q96PQ1 595 aa8.69□□□□□ -1.02
CTNNA1-221ENST00000520339 UTP23Q9BRU9 249 aaKnown RBP8.69□□□□□ -1.02
CTNNA1-221ENST00000520339 HES7Q9BYE0 225 aa8.69□□□□□ -1.02
CTNNA1-221ENST00000520339 CLK4Q9HAZ1 481 aaKnown RBP8.69□□□□□ -1.02
CTNNA1-221ENST00000520339 MOCS1Q9NZB8 636 aa8.69□□□□□ -1.02
CTNNA1-221ENST00000520339 RNF14Q9UBS8 474 aa8.69□□□□□ -1.02
CTNNA1-221ENST00000520339 CHMP2BQ9UQN3 213 aa8.69□□□□□ -1.02
CTNNA1-221ENST00000520339 EMC9Q9Y3B6 208 aa8.69□□□□□ -1.02
CTNNA1-221ENST00000520339 PCM1Q15154 2024 aa8.68□□□□□ -1.02
CTNNA1-221ENST00000520339 ARHGAP10A1A4S6 786 aa8.68□□□□□ -1.02
CTNNA1-221ENST00000520339 PABPN1LA6NDY0 278 aaKnown RBP8.68□□□□□ -1.02
CTNNA1-221ENST00000520339 GABRR3A8MPY1 467 aa8.68□□□□□ -1.02
CTNNA1-221ENST00000520339 PRSS44E7EML9 344 aa8.68□□□□□ -1.02
CTNNA1-221ENST00000520339 CDC7O00311 574 aa8.68□□□□□ -1.02
CTNNA1-221ENST00000520339 CCL21O00585 134 aa8.68□□□□□ -1.02
CTNNA1-221ENST00000520339 TTI1O43156 1089 aa8.68□□□□□ -1.02
CTNNA1-221ENST00000520339 PRODHO43272 600 aa8.68□□□□□ -1.02
CTNNA1-221ENST00000520339 B4GALT2O60909 372 aa8.68□□□□□ -1.02
CTNNA1-221ENST00000520339 NEURL1O76050 574 aa8.68□□□□□ -1.02
CTNNA1-221ENST00000520339 KCNH1O95259 989 aa8.68□□□□□ -1.02
CTNNA1-221ENST00000520339 SERPIND1P05546 499 aa8.68□□□□□ -1.02
CTNNA1-221ENST00000520339 ZNF888P0CJ79 500 aaPredicted RBP8.68□□□□□ -1.02
CTNNA1-221ENST00000520339 ZNF37AP17032 561 aaPredicted RBP8.68□□□□□ -1.02
CTNNA1-221ENST00000520339 ITGA8P53708 1063 aa8.68□□□□□ -1.02
CTNNA1-221ENST00000520339 TAS2R39P59534 338 aa8.68□□□□□ -1.02
CTNNA1-221ENST00000520339 RAB8AP61006 207 aa8.68□□□□□ -1.02
CTNNA1-221ENST00000520339 OLR1P78380 273 aa8.68□□□□□ -1.02
CTNNA1-221ENST00000520339 BTG2P78543 158 aa8.68□□□□□ -1.02
CTNNA1-221ENST00000520339 GABPB1Q06547 395 aaPredicted RBP8.68□□□□□ -1.02
CTNNA1-221ENST00000520339 RGS1Q08116 209 aa8.68□□□□□ -1.02
CTNNA1-221ENST00000520339 MGAT5Q09328 741 aa8.68□□□□□ -1.02
CTNNA1-221ENST00000520339 PPP1R3AQ16821 1122 aa8.68□□□□□ -1.02
CTNNA1-221ENST00000520339 CYP27C1Q4G0S4 372 aa8.68□□□□□ -1.02
CTNNA1-221ENST00000520339 TEX35Q5T0J7 233 aa8.68□□□□□ -1.02
CTNNA1-221ENST00000520339 SLC25A25Q6KCM7 469 aa8.68□□□□□ -1.02
CTNNA1-221ENST00000520339 NIPAL1Q6NVV3 410 aa8.68□□□□□ -1.02
CTNNA1-221ENST00000520339 QSOX2Q6ZRP7 698 aa8.68□□□□□ -1.02
CTNNA1-221ENST00000520339 ABHD13Q7L211 337 aa8.68□□□□□ -1.02
CTNNA1-221ENST00000520339 ZNF572Q7Z3I7 529 aaPredicted RBP8.68□□□□□ -1.02
CTNNA1-221ENST00000520339 THOC6Q86W42 341 aaKnown RBP8.68□□□□□ -1.02
CTNNA1-221ENST00000520339 ZC3HC1Q86WB0 502 aaKnown RBP8.68□□□□□ -1.02
CTNNA1-221ENST00000520339 RPS19BP1Q86WX3 136 aaKnown RBP8.68□□□□□ -1.02
CTNNA1-221ENST00000520339 SCUBE1Q8IWY4 988 aa8.68□□□□□ -1.02
CTNNA1-221ENST00000520339 KLHL7Q8IXQ5 586 aa8.68□□□□□ -1.02
CTNNA1-221ENST00000520339 KIF2BQ8N4N8 673 aa8.68□□□□□ -1.02
CTNNA1-221ENST00000520339 ANKRD53Q8N9V6 530 aa8.68□□□□□ -1.02
CTNNA1-221ENST00000520339 CCDC120Q96HB5 630 aa8.68□□□□□ -1.02
CTNNA1-221ENST00000520339 Q96M66 194 aa8.68□□□□□ -1.02
CTNNA1-221ENST00000520339 AIF1LQ9BQI0 150 aa8.68□□□□□ -1.02
CTNNA1-221ENST00000520339 AICDAQ9GZX7 198 aa8.68□□□□□ -1.02
CTNNA1-221ENST00000520339 KLHL31Q9H511 634 aa8.68□□□□□ -1.02
CTNNA1-221ENST00000520339 CDCP1Q9H5V8 836 aa8.68□□□□□ -1.02
CTNNA1-221ENST00000520339 PELI2Q9HAT8 420 aa8.68□□□□□ -1.02
CTNNA1-221ENST00000520339 KLHL1Q9NR64 748 aa8.68□□□□□ -1.02
CTNNA1-221ENST00000520339 ANKRD10Q9NXR5 420 aa8.68□□□□□ -1.02
CTNNA1-221ENST00000520339 CGGBP1Q9UFW8 167 aaPredicted RBP8.68□□□□□ -1.02
CTNNA1-221ENST00000520339 NOL12Q9UGY1 213 aaKnown RBP eCLIP8.68□□□□□ -1.02
CTNNA1-221ENST00000520339 SLC22A14Q9Y267 594 aa8.68□□□□□ -1.02
CTNNA1-221ENST00000520339 ZNF835Q9Y2P0 537 aa8.68□□□□□ -1.02
CTNNA1-221ENST00000520339 KLF2Q9Y5W3 355 aaPredicted RBP8.68□□□□□ -1.02
CTNNA1-221ENST00000520339 PSAT1Q9Y617 370 aa8.68□□□□□ -1.02
CTNNA1-221ENST00000520339 KCNE2Q9Y6J6 123 aa8.68□□□□□ -1.02
CTNNA1-221ENST00000520339 V9GYY5 206 aaPredicted RBP8.68□□□□□ -1.02
CTNNA1-221ENST00000520339 UTP20O75691 2785 aaKnown RBP8.68□□□□□ -1.02
CTNNA1-221ENST00000520339 ITPR2Q14571 2701 aa8.67□□□□□ -1.02
CTNNA1-221ENST00000520339 IGKV3D-11A0A0A0MRZ8 115 aa8.67□□□□□ -1.02
CTNNA1-221ENST00000520339 TRBV23-1A0A0A0MS06 115 aa8.67□□□□□ -1.02
CTNNA1-221ENST00000520339 TTC36A6NLP5 189 aa8.67□□□□□ -1.02
CTNNA1-221ENST00000520339 FAM227AF5H4B4 570 aa8.67□□□□□ -1.02
CTNNA1-221ENST00000520339 NDC80O14777 642 aa8.67□□□□□ -1.02
CTNNA1-221ENST00000520339 SLC19A2O60779 497 aa8.67□□□□□ -1.02
CTNNA1-221ENST00000520339 SEC31AO94979 1220 aaKnown RBP8.67□□□□□ -1.02
CTNNA1-221ENST00000520339 SP1P08047 785 aa8.67□□□□□ -1.02
CTNNA1-221ENST00000520339 SERPINA6P08185 405 aa8.67□□□□□ -1.02
CTNNA1-221ENST00000520339 JAK1P23458 1154 aa8.67□□□□□ -1.02
CTNNA1-221ENST00000520339 HNF4AP41235 474 aa8.67□□□□□ -1.02
CTNNA1-221ENST00000520339 KIR3DL1P43629 444 aa8.67□□□□□ -1.02
CTNNA1-221ENST00000520339 ARL4CP56559 192 aa8.67□□□□□ -1.02
CTNNA1-221ENST00000520339 MLF1P58340 268 aa8.67□□□□□ -1.02
CTNNA1-221ENST00000520339 TAS2R50P59544 299 aa8.67□□□□□ -1.02
CTNNA1-221ENST00000520339 SKP1P63208 163 aa8.67□□□□□ -1.02
CTNNA1-221ENST00000520339 CDKL1Q00532 357 aa8.67□□□□□ -1.02
CTNNA1-221ENST00000520339 DR1Q01658 176 aa8.67□□□□□ -1.02
CTNNA1-221ENST00000520339 RBPJQ06330 500 aa8.67□□□□□ -1.02
CTNNA1-221ENST00000520339 ZNF460Q14592 562 aa8.67□□□□□ -1.02
CTNNA1-221ENST00000520339 RBBP5Q15291 538 aaKnown RBP8.67□□□□□ -1.02
CTNNA1-221ENST00000520339 C3AR1Q16581 482 aa8.67□□□□□ -1.02
CTNNA1-221ENST00000520339 KRTCAP3Q53RY4 240 aa8.67□□□□□ -1.02
CTNNA1-221ENST00000520339 MTFR2Q6P444 385 aa8.67□□□□□ -1.02
CTNNA1-221ENST00000520339 RPTNQ6XPR3 784 aa8.67□□□□□ -1.02
CTNNA1-221ENST00000520339 Q6ZPB1 254 aaPredicted RBP8.67□□□□□ -1.02
CTNNA1-221ENST00000520339 MRGPRGQ86SM5 289 aa8.67□□□□□ -1.02
CTNNA1-221ENST00000520339 TMPRSS11BQ86T26 416 aa8.67□□□□□ -1.02
CTNNA1-221ENST00000520339 SIAH3Q8IW03 269 aa8.67□□□□□ -1.02
CTNNA1-221ENST00000520339 KLHDC8AQ8IYD2 350 aa8.67□□□□□ -1.02
CTNNA1-221ENST00000520339 ZNF808Q8N4W9 903 aaPredicted RBP8.67□□□□□ -1.02
CTNNA1-221ENST00000520339 NKAPQ8N5F7 415 aaKnown RBP8.67□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms