RNA–Protein interactions for RNA: ENST00000520265.1

VEGFA-221, Transcript of vascular endothelial growth factor A, humanhuman

TSL 5

Gene VEGFA, Length 336 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-221ENST00000520265 FETUBQ9UGM5 382 aa13.26□□□□□ -0.29
VEGFA-221ENST00000520265 PHF11Q9UIL8 331 aa13.26□□□□□ -0.29
VEGFA-221ENST00000520265 SLC12A4Q9UP95 1085 aa13.26□□□□□ -0.29
VEGFA-221ENST00000520265 PLPP1O14494 284 aa13.25□□□□□ -0.29
VEGFA-221ENST00000520265 FCHO1O14526 889 aa13.25□□□□□ -0.29
VEGFA-221ENST00000520265 MAN1A2O60476 641 aa13.25□□□□□ -0.29
VEGFA-221ENST00000520265 PRAMEF2O60811 474 aa13.25□□□□□ -0.29
VEGFA-221ENST00000520265 PRKRAO75569 313 aaKnown RBP13.25□□□□□ -0.29
VEGFA-221ENST00000520265 RPS17P08708 135 aaKnown RBP13.25□□□□□ -0.29
VEGFA-221ENST00000520265 MYL2P10916 166 aa13.25□□□□□ -0.29
VEGFA-221ENST00000520265 COX7A2P14406 83 aa13.25□□□□□ -0.29
VEGFA-221ENST00000520265 ATP5F1P24539 256 aaPredicted RBP13.25□□□□□ -0.29
VEGFA-221ENST00000520265 HMOX2P30519 316 aa13.25□□□□□ -0.29
VEGFA-221ENST00000520265 HSD17B3P37058 310 aa13.25□□□□□ -0.29
VEGFA-221ENST00000520265 BUD31P41223 144 aaPredicted RBP13.25□□□□□ -0.29
VEGFA-221ENST00000520265 CLCN2P51788 898 aa13.25□□□□□ -0.29
VEGFA-221ENST00000520265 HERVK_113P63132 956 aa13.25□□□□□ -0.29
VEGFA-221ENST00000520265 TRAF3Q13114 568 aa13.25□□□□□ -0.29
VEGFA-221ENST00000520265 E2F2Q14209 437 aa13.25□□□□□ -0.29
VEGFA-221ENST00000520265 EIF2S3LQ2VIR3 472 aaKnown RBP13.25□□□□□ -0.29
VEGFA-221ENST00000520265 FHL5Q5TD97 284 aa13.25□□□□□ -0.29
VEGFA-221ENST00000520265 GPR180Q86V85 440 aa13.25□□□□□ -0.29
VEGFA-221ENST00000520265 LCA5Q86VQ0 697 aa13.25□□□□□ -0.29
VEGFA-221ENST00000520265 RPS19BP1Q86WX3 136 aaKnown RBP13.25□□□□□ -0.29
VEGFA-221ENST00000520265 SLC22A9Q8IVM8 553 aa13.25□□□□□ -0.29
VEGFA-221ENST00000520265 OR4N5Q8IXE1 308 aa13.25□□□□□ -0.29
VEGFA-221ENST00000520265 CDYL2Q8N8U2 506 aa13.25□□□□□ -0.29
VEGFA-221ENST00000520265 B3GNT7Q8NFL0 401 aa13.25□□□□□ -0.29
VEGFA-221ENST00000520265 ZNF483Q8TF39 744 aaPredicted RBP13.25□□□□□ -0.29
VEGFA-221ENST00000520265 HAS2Q92819 552 aa13.25□□□□□ -0.29
VEGFA-221ENST00000520265 NCLNQ969V3 563 aa13.25□□□□□ -0.29
VEGFA-221ENST00000520265 VMP1Q96GC9 406 aa13.25□□□□□ -0.29
VEGFA-221ENST00000520265 DGAT2Q96PD7 388 aa13.25□□□□□ -0.29
VEGFA-221ENST00000520265 TMEM237Q96Q45 408 aa13.25□□□□□ -0.29
VEGFA-221ENST00000520265 HBEGFQ99075 208 aa13.25□□□□□ -0.29
VEGFA-221ENST00000520265 SERPINI1Q99574 410 aa13.25□□□□□ -0.29
VEGFA-221ENST00000520265 ERVK-6Q9BXR3 956 aa13.25□□□□□ -0.29
VEGFA-221ENST00000520265 ALOXE3Q9BYJ1 711 aa13.25□□□□□ -0.29
VEGFA-221ENST00000520265 OR8D2Q9GZM6 311 aa13.25□□□□□ -0.29
VEGFA-221ENST00000520265 WDR41Q9HAD4 459 aa13.25□□□□□ -0.29
VEGFA-221ENST00000520265 ZBTB26Q9HCK0 441 aa13.25□□□□□ -0.29
VEGFA-221ENST00000520265 ADAP2Q9NPF8 381 aa13.25□□□□□ -0.29
VEGFA-221ENST00000520265 OLAHQ9NV23 265 aa13.25□□□□□ -0.29
VEGFA-221ENST00000520265 DCDC2Q9UHG0 476 aa13.25□□□□□ -0.29
VEGFA-221ENST00000520265 SNX6Q9UNH7 406 aa13.25□□□□□ -0.29
VEGFA-221ENST00000520265 NTNG1Q9Y2I2 539 aa13.25□□□□□ -0.29
VEGFA-221ENST00000520265 NBASA2RRP1 2371 aa13.24□□□□□ -0.29
VEGFA-221ENST00000520265 ANKUB1A6NFN9 424 aa13.24□□□□□ -0.29
VEGFA-221ENST00000520265 GLOD5A6NK44 160 aa13.24□□□□□ -0.29
VEGFA-221ENST00000520265 C17orf105B2RV13 164 aa13.24□□□□□ -0.29
VEGFA-221ENST00000520265 TGFBR3LH3BV60 316 aa13.24□□□□□ -0.29
VEGFA-221ENST00000520265 CYR61O00622 381 aa13.24□□□□□ -0.29
VEGFA-221ENST00000520265 COPEO14579 308 aa13.24□□□□□ -0.29
VEGFA-221ENST00000520265 DYRK3O43781 588 aa13.24□□□□□ -0.29
VEGFA-221ENST00000520265 OR10H2O60403 315 aa13.24□□□□□ -0.29
VEGFA-221ENST00000520265 DLX3O60479 287 aa13.24□□□□□ -0.29
VEGFA-221ENST00000520265 CTNSO60931 367 aa13.24□□□□□ -0.29
VEGFA-221ENST00000520265 EEDO75530 441 aaKnown RBP13.24□□□□□ -0.29
VEGFA-221ENST00000520265 CRCPO75575 148 aa13.24□□□□□ -0.29
VEGFA-221ENST00000520265 OR4F21O95013 312 aa13.24□□□□□ -0.29
VEGFA-221ENST00000520265 RASAL1O95294 804 aa13.24□□□□□ -0.29
VEGFA-221ENST00000520265 ETHE1O95571 254 aa13.24□□□□□ -0.29
VEGFA-221ENST00000520265 GSTA1P08263 222 aa13.24□□□□□ -0.29
VEGFA-221ENST00000520265 NR2F6P10588 404 aa13.24□□□□□ -0.29
VEGFA-221ENST00000520265 CD46P15529 392 aa13.24□□□□□ -0.29
VEGFA-221ENST00000520265 TPP2P29144 1249 aaPredicted RBP13.24□□□□□ -0.29
VEGFA-221ENST00000520265 TNFRSF17Q02223 184 aa13.24□□□□□ -0.29
VEGFA-221ENST00000520265 CLCQ05315 142 aa13.24□□□□□ -0.29
VEGFA-221ENST00000520265 SRSF11Q05519 484 aaKnown RBP13.24□□□□□ -0.29
VEGFA-221ENST00000520265 PCDH1Q08174 1060 aa13.24□□□□□ -0.29
VEGFA-221ENST00000520265 TUBA3CQ13748 450 aa13.24□□□□□ -0.29
VEGFA-221ENST00000520265 SERTAD2Q14140 314 aa13.24□□□□□ -0.29
VEGFA-221ENST00000520265 OR1C1Q15619 314 aa13.24□□□□□ -0.29
VEGFA-221ENST00000520265 ELAVL1Q15717 326 aaKnown RBP13.24□□□□□ -0.29
VEGFA-221ENST00000520265 ZNF766Q5HY98 468 aa13.24□□□□□ -0.29
VEGFA-221ENST00000520265 CFAP157Q5JU67 520 aa13.24□□□□□ -0.29
VEGFA-221ENST00000520265 C18orf63Q68DL7 685 aa13.24□□□□□ -0.29
VEGFA-221ENST00000520265 LETMD1Q6P1Q0 360 aa13.24□□□□□ -0.29
VEGFA-221ENST00000520265 TUBA3EQ6PEY2 450 aa13.24□□□□□ -0.29
VEGFA-221ENST00000520265 C4orf33Q8N1A6 199 aa13.24□□□□□ -0.29
VEGFA-221ENST00000520265 TMEM132CQ8N3T6 1108 aa13.24□□□□□ -0.29
VEGFA-221ENST00000520265 HORMAD2Q8N7B1 307 aa13.24□□□□□ -0.29
VEGFA-221ENST00000520265 BCORP1Q8N888 145 aa13.24□□□□□ -0.29
VEGFA-221ENST00000520265 OR2W6PQ8NHA6 318 aa13.24□□□□□ -0.29
VEGFA-221ENST00000520265 WDR20Q8TBZ3 569 aa13.24□□□□□ -0.29
VEGFA-221ENST00000520265 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP13.24□□□□□ -0.295e-12■■■■■ 41.4
VEGFA-221ENST00000520265 DAZLQ92904 295 aaKnown RBP13.24□□□□□ -0.29
VEGFA-221ENST00000520265 NTMT1Q9BV86 223 aa13.24□□□□□ -0.29
VEGFA-221ENST00000520265 RPF2Q9H7B2 306 aaKnown RBP13.24□□□□□ -0.29
VEGFA-221ENST00000520265 PPCSQ9HAB8 311 aa13.24□□□□□ -0.29
VEGFA-221ENST00000520265 LYARQ9NX58 379 aaKnown RBP13.24□□□□□ -0.29
VEGFA-221ENST00000520265 MS4A12Q9NXJ0 267 aa13.24□□□□□ -0.29
VEGFA-221ENST00000520265 AHSPQ9NZD4 102 aa13.24□□□□□ -0.29
VEGFA-221ENST00000520265 COPS7AQ9UBW8 275 aa13.24□□□□□ -0.29
VEGFA-221ENST00000520265 CPAMD8Q8IZJ3 1885 aa13.24□□□□□ -0.29
VEGFA-221ENST00000520265 SPENQ96T58 3664 aaKnown RBP13.24□□□□□ -0.29
VEGFA-221ENST00000520265 CNTRLQ7Z7A1 2325 aa13.24□□□□□ -0.29
VEGFA-221ENST00000520265 BLACEA4D250 179 aa13.23□□□□□ -0.29
VEGFA-221ENST00000520265 SYNDIG1LA6NDD5 238 aa13.23□□□□□ -0.29
VEGFA-221ENST00000520265 ESPNB1AK53 854 aa13.23□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 46.9 ms