RNA–Protein interactions for RNA: ENST00000519474.5

HDAC3-215, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 736 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-215ENST00000519474 ARMC2Q8NEN0 867 aa8.73□□□□□ -1.01
HDAC3-215ENST00000519474 SVIPQ8NHG7 77 aa8.73□□□□□ -1.01
HDAC3-215ENST00000519474 HUS1BQ8NHY5 278 aa8.73□□□□□ -1.01
HDAC3-215ENST00000519474 SUN3Q8TAQ9 357 aa8.73□□□□□ -1.01
HDAC3-215ENST00000519474 UBE2E3Q969T4 207 aa8.73□□□□□ -1.01
HDAC3-215ENST00000519474 ANKRD9Q96BM1 317 aaPredicted RBP8.73□□□□□ -1.01
HDAC3-215ENST00000519474 CMTM7Q96FZ5 175 aa8.73□□□□□ -1.01
HDAC3-215ENST00000519474 UTP23Q9BRU9 249 aaKnown RBP8.73□□□□□ -1.01
HDAC3-215ENST00000519474 SORBS1Q9BX66 1292 aaKnown RBP8.73□□□□□ -1.01
HDAC3-215ENST00000519474 HES7Q9BYE0 225 aa8.73□□□□□ -1.01
HDAC3-215ENST00000519474 ALOXE3Q9BYJ1 711 aa8.73□□□□□ -1.01
HDAC3-215ENST00000519474 TXLNGYQ9BZA5 131 aa8.73□□□□□ -1.01
HDAC3-215ENST00000519474 TRIM45Q9H8W5 580 aaPredicted RBP8.73□□□□□ -1.01
HDAC3-215ENST00000519474 IPPKQ9H8X2 491 aa8.73□□□□□ -1.01
HDAC3-215ENST00000519474 ZBTB26Q9HCK0 441 aa8.73□□□□□ -1.01
HDAC3-215ENST00000519474 LYRM4Q9HD34 91 aa8.73□□□□□ -1.01
HDAC3-215ENST00000519474 ANKRD10Q9NXR5 420 aa8.73□□□□□ -1.01
HDAC3-215ENST00000519474 PSD3Q9NYI0 1048 aa8.73□□□□□ -1.01
HDAC3-215ENST00000519474 CPSF2Q9P2I0 782 aaKnown RBP8.73□□□□□ -1.01
HDAC3-215ENST00000519474 VTI1BQ9UEU0 232 aa8.73□□□□□ -1.01
HDAC3-215ENST00000519474 ADGRE2Q9UHX3 823 aa8.73□□□□□ -1.01
HDAC3-215ENST00000519474 ZNF223Q9UK11 482 aaPredicted RBP8.73□□□□□ -1.01
HDAC3-215ENST00000519474 PPIEQ9UNP9 301 aaKnown RBP8.73□□□□□ -1.01
HDAC3-215ENST00000519474 OSGIN2Q9Y236 505 aa8.73□□□□□ -1.01
HDAC3-215ENST00000519474 ANGPTL3Q9Y5C1 460 aa8.73□□□□□ -1.01
HDAC3-215ENST00000519474 PCDHGA11Q9Y5H2 935 aa8.73□□□□□ -1.01
HDAC3-215ENST00000519474 TNPO3Q9Y5L0 923 aaKnown RBP8.73□□□□□ -1.01
HDAC3-215ENST00000519474 RELNP78509 3460 aa8.72□□□□□ -1.01
HDAC3-215ENST00000519474 A0A087WUV0 522 aaPredicted RBP8.72□□□□□ -1.01
HDAC3-215ENST00000519474 A0A088AWK7 358 aa8.72□□□□□ -1.01
HDAC3-215ENST00000519474 TMEM200CA6NKL6 621 aa8.72□□□□□ -1.01
HDAC3-215ENST00000519474 GABRR3A8MPY1 467 aa8.72□□□□□ -1.01
HDAC3-215ENST00000519474 FAM25EA8MYX2 175 aa8.72□□□□□ -1.01
HDAC3-215ENST00000519474 H0YIV9 168 aa8.72□□□□□ -1.01
HDAC3-215ENST00000519474 SAP18O00422 153 aaKnown RBP8.72□□□□□ -1.01
HDAC3-215ENST00000519474 PPP6CO00743 305 aa8.72□□□□□ -1.01
HDAC3-215ENST00000519474 CDK2AP1O14519 115 aa8.72□□□□□ -1.01
HDAC3-215ENST00000519474 OR7A17O14581 309 aa8.72□□□□□ -1.01
HDAC3-215ENST00000519474 PRKNO60260 465 aaPredicted RBP8.72□□□□□ -1.01
HDAC3-215ENST00000519474 LDB3O75112 727 aa8.72□□□□□ -1.01
HDAC3-215ENST00000519474 KRT38O76015 456 aa8.72□□□□□ -1.01
HDAC3-215ENST00000519474 NEURL1O76050 574 aa8.72□□□□□ -1.01
HDAC3-215ENST00000519474 MYO1DO94832 1006 aa8.72□□□□□ -1.01
HDAC3-215ENST00000519474 SCELO95171 688 aa8.72□□□□□ -1.01
HDAC3-215ENST00000519474 LDLRP01130 860 aa8.72□□□□□ -1.01
HDAC3-215ENST00000519474 SP1P08047 785 aa8.72□□□□□ -1.01
HDAC3-215ENST00000519474 SNRPAP09012 282 aaKnown RBP8.72□□□□□ -1.01
HDAC3-215ENST00000519474 COL6A2P12110 1019 aa8.72□□□□□ -1.01
HDAC3-215ENST00000519474 GFAPP14136 432 aa8.72□□□□□ -1.01
HDAC3-215ENST00000519474 ZNF10P21506 573 aaPredicted RBP8.72□□□□□ -1.01
HDAC3-215ENST00000519474 HIST1H1TP22492 207 aaPredicted RBP8.72□□□□□ -1.01
HDAC3-215ENST00000519474 PTX3P26022 381 aaPredicted RBP8.72□□□□□ -1.01
HDAC3-215ENST00000519474 TPP2P29144 1249 aaPredicted RBP8.72□□□□□ -1.01
HDAC3-215ENST00000519474 HPDP32754 393 aaPredicted RBP8.72□□□□□ -1.01
HDAC3-215ENST00000519474 PIK3CBP42338 1070 aa8.72□□□□□ -1.01
HDAC3-215ENST00000519474 NEK2P51955 445 aa8.72□□□□□ -1.01
HDAC3-215ENST00000519474 RPS13P62277 151 aaKnown RBP8.72□□□□□ -1.01
HDAC3-215ENST00000519474 CBX1P83916 185 aa8.72□□□□□ -1.01
HDAC3-215ENST00000519474 TGM3Q08188 693 aa8.72□□□□□ -1.01
HDAC3-215ENST00000519474 SLC13A2Q13183 592 aa8.72□□□□□ -1.01
HDAC3-215ENST00000519474 SLAMF1Q13291 335 aa8.72□□□□□ -1.01
HDAC3-215ENST00000519474 ELOAQ14241 798 aaKnown RBP8.72□□□□□ -1.01
HDAC3-215ENST00000519474 OR1C1Q15619 314 aa8.72□□□□□ -1.01
HDAC3-215ENST00000519474 AP5B1Q2VPB7 878 aa8.72□□□□□ -1.01
HDAC3-215ENST00000519474 KHDRBS2Q5VWX1 349 aaKnown RBP8.72□□□□□ -1.01
HDAC3-215ENST00000519474 HIST2H2BCQ6DN03 193 aa8.72□□□□□ -1.01
HDAC3-215ENST00000519474 SLC25A25Q6KCM7 469 aa8.72□□□□□ -1.01
HDAC3-215ENST00000519474 METTL2BQ6P1Q9 378 aaKnown RBP8.72□□□□□ -1.01
HDAC3-215ENST00000519474 KLC3Q6P597 504 aa8.72□□□□□ -1.01
HDAC3-215ENST00000519474 ADGRD1Q6QNK2 874 aa8.72□□□□□ -1.01
HDAC3-215ENST00000519474 FAM180AQ6UWF9 173 aa8.72□□□□□ -1.01
HDAC3-215ENST00000519474 GOLGA7Q7Z5G4 137 aa8.72□□□□□ -1.01
HDAC3-215ENST00000519474 CLNKQ7Z7G1 428 aa8.72□□□□□ -1.01
HDAC3-215ENST00000519474 IFT20Q8IY31 132 aa8.72□□□□□ -1.01
HDAC3-215ENST00000519474 LGI4Q8N135 537 aa8.72□□□□□ -1.01
HDAC3-215ENST00000519474 SLC5A8Q8N695 610 aa8.72□□□□□ -1.01
HDAC3-215ENST00000519474 FAM47BQ8NA70 645 aa8.72□□□□□ -1.01
HDAC3-215ENST00000519474 LRRN4CLQ8ND94 238 aa8.72□□□□□ -1.01
HDAC3-215ENST00000519474 B3GNT7Q8NFL0 401 aa8.72□□□□□ -1.01
HDAC3-215ENST00000519474 WDR20Q8TBZ3 569 aa8.72□□□□□ -1.01
HDAC3-215ENST00000519474 PTPMT1Q8WUK0 201 aaPredicted RBP8.72□□□□□ -1.01
HDAC3-215ENST00000519474 NR4A3Q92570 626 aa8.72□□□□□ -1.01
HDAC3-215ENST00000519474 UCN3Q969E3 161 aa8.72□□□□□ -1.01
HDAC3-215ENST00000519474 RGMAQ96B86 450 aa8.72□□□□□ -1.01
HDAC3-215ENST00000519474 MTFMTQ96DP5 389 aaKnown RBP8.72□□□□□ -1.01
HDAC3-215ENST00000519474 PHF21BQ96EK2 531 aa8.72□□□□□ -1.01
HDAC3-215ENST00000519474 SCMH1Q96GD3 660 aa8.72□□□□□ -1.01
HDAC3-215ENST00000519474 KCNC2Q96PR1 638 aa8.72□□□□□ -1.01
HDAC3-215ENST00000519474 CSF3RQ99062 836 aa8.72□□□□□ -1.01
HDAC3-215ENST00000519474 MTERF1Q99551 399 aaKnown RBP8.72□□□□□ -1.01
HDAC3-215ENST00000519474 NTMT1Q9BV86 223 aa8.72□□□□□ -1.01
HDAC3-215ENST00000519474 DEFB126Q9BYW3 111 aa8.72□□□□□ -1.01
HDAC3-215ENST00000519474 ROGDIQ9GZN7 287 aa8.72□□□□□ -1.01
HDAC3-215ENST00000519474 NOL11Q9H8H0 719 aaKnown RBP8.72□□□□□ -1.01
HDAC3-215ENST00000519474 KLHL1Q9NR64 748 aa8.72□□□□□ -1.01
HDAC3-215ENST00000519474 OLAHQ9NV23 265 aa8.72□□□□□ -1.01
HDAC3-215ENST00000519474 ABI3Q9P2A4 366 aa8.72□□□□□ -1.01
HDAC3-215ENST00000519474 TMCC3Q9ULS5 477 aa8.72□□□□□ -1.01
HDAC3-215ENST00000519474 SLC5A6Q9Y289 635 aa8.72□□□□□ -1.01
HDAC3-215ENST00000519474 ZGRF1Q86YA3 2104 aa8.72□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms