RNA–Protein interactions for RNA: ENST00000519254.2

CLN8-204, Transcript of CLN8, transmembrane ER and ERGIC protein, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CLN8, Length 1,769 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN8-204ENST00000519254 MAP3K3Q99759 626 aa13.75□□□□□ -0.21
CLN8-204ENST00000519254 MACROD1Q9BQ69 325 aa13.75□□□□□ -0.21
CLN8-204ENST00000519254 EDEM2Q9BV94 578 aa13.75□□□□□ -0.21
CLN8-204ENST00000519254 SEMA6CQ9H3T2 930 aa13.75□□□□□ -0.21
CLN8-204ENST00000519254 KLHL31Q9H511 634 aa13.75□□□□□ -0.21
CLN8-204ENST00000519254 DDX31Q9H8H2 851 aaKnown RBP13.75□□□□□ -0.21
CLN8-204ENST00000519254 COQ10BQ9H8M1 238 aa13.75□□□□□ -0.21
CLN8-204ENST00000519254 TPT1P8Q9HAU6 139 aa13.75□□□□□ -0.21
CLN8-204ENST00000519254 RXFP3Q9NSD7 469 aa13.75□□□□□ -0.21
CLN8-204ENST00000519254 ADAM29Q9UKF5 820 aa13.75□□□□□ -0.21
CLN8-204ENST00000519254 CNOT11Q9UKZ1 510 aaKnown RBP13.75□□□□□ -0.21
CLN8-204ENST00000519254 WBP11Q9Y2W2 641 aaKnown RBP13.75□□□□□ -0.21
CLN8-204ENST00000519254 V9GYQ6 96 aa13.75□□□□□ -0.21
CLN8-204ENST00000519254 ARID1BQ8NFD5 2236 aaPredicted RBP13.75□□□□□ -0.21
CLN8-204ENST00000519254 SCN3AQ9NY46 2000 aa13.74□□□□□ -0.21
CLN8-204ENST00000519254 GPR179Q6PRD1 2367 aa13.74□□□□□ -0.21
CLN8-204ENST00000519254 A0A0J9YVX5 310 aa13.74□□□□□ -0.21
CLN8-204ENST00000519254 ARHGAP10A1A4S6 786 aa13.74□□□□□ -0.21
CLN8-204ENST00000519254 OR2A25A4D2G3 310 aa13.74□□□□□ -0.21
CLN8-204ENST00000519254 FAM149AA5PLN7 773 aa13.74□□□□□ -0.21
CLN8-204ENST00000519254 SLC9B1P1A6NJY1 282 aa13.74□□□□□ -0.21
CLN8-204ENST00000519254 TNFSF14O43557 240 aa13.74□□□□□ -0.21
CLN8-204ENST00000519254 TMPRSS11DO60235 418 aa13.74□□□□□ -0.21
CLN8-204ENST00000519254 CTSVO60911 334 aa13.74□□□□□ -0.21
CLN8-204ENST00000519254 CREG1O75629 220 aa13.74□□□□□ -0.21
CLN8-204ENST00000519254 KCNK5O95279 499 aa13.74□□□□□ -0.21
CLN8-204ENST00000519254 ZNF883P0CG24 379 aa13.74□□□□□ -0.21
CLN8-204ENST00000519254 UQCRBP14927 111 aa13.74□□□□□ -0.21
CLN8-204ENST00000519254 FASP25445 335 aa13.74□□□□□ -0.21
CLN8-204ENST00000519254 GRK6P43250 576 aa13.74□□□□□ -0.21
CLN8-204ENST00000519254 HBA1P69905 142 aa13.74□□□□□ -0.21
CLN8-204ENST00000519254 KLC1Q07866 573 aa13.74□□□□□ -0.21
CLN8-204ENST00000519254 ADPRMQ3LIE5 342 aa13.74□□□□□ -0.21
CLN8-204ENST00000519254 SNAP47Q5SQN1 464 aa13.74□□□□□ -0.21
CLN8-204ENST00000519254 OR4C11Q6IEV9 310 aa13.74□□□□□ -0.21
CLN8-204ENST00000519254 CLEC4FQ8N1N0 589 aa13.74□□□□□ -0.21
CLN8-204ENST00000519254 GALNT4Q8N4A0 578 aa13.74□□□□□ -0.21
CLN8-204ENST00000519254 FAM86B1Q8N7N1 296 aa13.74□□□□□ -0.21
CLN8-204ENST00000519254 OR6C4Q8NGE1 309 aa13.74□□□□□ -0.21
CLN8-204ENST00000519254 OR4A15Q8NGL6 344 aa13.74□□□□□ -0.21
CLN8-204ENST00000519254 BAHD1Q8TBE0 780 aaPredicted RBP13.74□□□□□ -0.21
CLN8-204ENST00000519254 ZFP90Q8TF47 636 aa13.74□□□□□ -0.21
CLN8-204ENST00000519254 EME1Q96AY2 570 aa13.74□□□□□ -0.21
CLN8-204ENST00000519254 QRFPRQ96P65 431 aa13.74□□□□□ -0.21
CLN8-204ENST00000519254 BTBD9Q96Q07 612 aa13.74□□□□□ -0.21
CLN8-204ENST00000519254 TEFMQ96QE5 360 aaKnown RBP13.74□□□□□ -0.21
CLN8-204ENST00000519254 CCDC3Q9BQI4 270 aa13.74□□□□□ -0.21
CLN8-204ENST00000519254 SLC6A16Q9GZN6 736 aa13.74□□□□□ -0.21
CLN8-204ENST00000519254 SEMA4GQ9NTN9 838 aa13.74□□□□□ -0.21
CLN8-204ENST00000519254 DNAAF2Q9NVR5 837 aaKnown RBP13.74□□□□□ -0.21
CLN8-204ENST00000519254 PCDHGA4Q9Y5G9 962 aa13.74□□□□□ -0.21
CLN8-204ENST00000519254 AK5Q9Y6K8 562 aa13.74□□□□□ -0.21
CLN8-204ENST00000519254 EME2A4GXA9 379 aaPredicted RBP13.73□□□□□ -0.21
CLN8-204ENST00000519254 C4orf51C9J302 202 aa13.73□□□□□ -0.21
CLN8-204ENST00000519254 FKBP9O95302 570 aa13.73□□□□□ -0.21
CLN8-204ENST00000519254 C6orf47O95873 294 aa13.73□□□□□ -0.21
CLN8-204ENST00000519254 DDCP20711 480 aa13.73□□□□□ -0.21
CLN8-204ENST00000519254 GSTM2P28161 218 aa13.73□□□□□ -0.21
CLN8-204ENST00000519254 CD1CP29017 333 aa13.73□□□□□ -0.21
CLN8-204ENST00000519254 CSF2RBP32927 897 aa13.73□□□□□ -0.21
CLN8-204ENST00000519254 GPLD1P80108 840 aa13.73□□□□□ -0.21
CLN8-204ENST00000519254 NR1D2Q14995 579 aa13.73□□□□□ -0.21
CLN8-204ENST00000519254 ADRM1Q16186 407 aa13.73□□□□□ -0.21
CLN8-204ENST00000519254 NKG7Q16617 165 aa13.73□□□□□ -0.21
CLN8-204ENST00000519254 PROX2Q3B8N5 592 aa13.73□□□□□ -0.21
CLN8-204ENST00000519254 INAVAQ3KP66 663 aa13.73□□□□□ -0.21
CLN8-204ENST00000519254 TMEM35AQ53FP2 167 aa13.73□□□□□ -0.21
CLN8-204ENST00000519254 ENPP6Q6UWR7 440 aa13.73□□□□□ -0.21
CLN8-204ENST00000519254 NUDT13Q86X67 352 aa13.73□□□□□ -0.21
CLN8-204ENST00000519254 PTOV1Q86YD1 416 aa13.73□□□□□ -0.21
CLN8-204ENST00000519254 ZZZ3Q8IYH5 903 aa13.73□□□□□ -0.21
CLN8-204ENST00000519254 C19orf47Q8N9M1 422 aaKnown RBP13.73□□□□□ -0.21
CLN8-204ENST00000519254 FAM47BQ8NA70 645 aa13.73□□□□□ -0.21
CLN8-204ENST00000519254 MFSD9Q8NBP5 474 aa13.73□□□□□ -0.21
CLN8-204ENST00000519254 IFI44Q8TCB0 444 aa13.73□□□□□ -0.21
CLN8-204ENST00000519254 PNPT1Q8TCS8 783 aaKnown RBP13.73□□□□□ -0.21
CLN8-204ENST00000519254 NETO1Q8TDF5 533 aa13.73□□□□□ -0.21
CLN8-204ENST00000519254 NAT6Q93015 286 aa13.73□□□□□ -0.21
CLN8-204ENST00000519254 ZDHHC12Q96GR4 267 aa13.73□□□□□ -0.21
CLN8-204ENST00000519254 CENPNQ96H22 339 aaPredicted RBP13.73□□□□□ -0.21
CLN8-204ENST00000519254 RNF145Q96MT1 663 aa13.73□□□□□ -0.21
CLN8-204ENST00000519254 TRAPPC9Q96Q05 1148 aa13.73□□□□□ -0.21
CLN8-204ENST00000519254 SLC29A1Q99808 456 aa13.73□□□□□ -0.21
CLN8-204ENST00000519254 CIB1Q99828 191 aa13.73□□□□□ -0.21
CLN8-204ENST00000519254 CHID1Q9BWS9 393 aa13.73□□□□□ -0.21
CLN8-204ENST00000519254 TRIM4Q9C037 500 aa13.73□□□□□ -0.21
CLN8-204ENST00000519254 CHST8Q9H2A9 424 aa13.73□□□□□ -0.21
CLN8-204ENST00000519254 DCAF13Q9NV06 445 aaKnown RBP13.73□□□□□ -0.21
CLN8-204ENST00000519254 TMEM9Q9P0T7 183 aa13.73□□□□□ -0.21
CLN8-204ENST00000519254 ANKMY1Q9P2S6 941 aa13.73□□□□□ -0.21
CLN8-204ENST00000519254 VPS4AQ9UN37 437 aa13.73□□□□□ -0.21
CLN8-204ENST00000519254 A0A0A6YYD5 115 aa13.73□□□□□ -0.21
CLN8-204ENST00000519254 A0A0G2JN53 185 aa13.73□□□□□ -0.21
CLN8-204ENST00000519254 TLCD2A6NGC4 264 aa13.73□□□□□ -0.21
CLN8-204ENST00000519254 TBX19O60806 448 aa13.73□□□□□ -0.21
CLN8-204ENST00000519254 MT-ND1P03886 318 aa13.73□□□□□ -0.21
CLN8-204ENST00000519254 RPLP0P05388 317 aaKnown RBP13.73□□□□□ -0.21
CLN8-204ENST00000519254 ABCB1P08183 1280 aaPredicted RBP13.73□□□□□ -0.21
CLN8-204ENST00000519254 FCGR1AP12314 374 aa13.73□□□□□ -0.21
CLN8-204ENST00000519254 CKMT1AP12532 417 aa13.73□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms