RNA–Protein interactions for RNA: ENST00000518344.1

FAM49B-208, Transcript of family with sequence similarity 49 member B, humanhuman

TSL 3

Gene FAM49B, Length 554 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM49B-208ENST00000518344 EMCNQ9ULC0 261 aa17.48■□□□□ 0.39
FAM49B-208ENST00000518344 VPS4AQ9UN37 437 aa17.48■□□□□ 0.39
FAM49B-208ENST00000518344 PCDHGA10Q9Y5H3 936 aa17.48■□□□□ 0.39
FAM49B-208ENST00000518344 FASNP49327 2511 aaKnown RBP17.48■□□□□ 0.39
FAM49B-208ENST00000518344 COPEO14579 308 aa17.47■□□□□ 0.39
FAM49B-208ENST00000518344 LDB3O75112 727 aa17.47■□□□□ 0.39
FAM49B-208ENST00000518344 OR4F21O95013 312 aa17.47■□□□□ 0.39
FAM49B-208ENST00000518344 MYL2P10916 166 aa17.47■□□□□ 0.39
FAM49B-208ENST00000518344 KRT4P19013 534 aa17.47■□□□□ 0.39
FAM49B-208ENST00000518344 PPP2R1BP30154 601 aa17.47■□□□□ 0.39
FAM49B-208ENST00000518344 CRHR1P34998 444 aa17.47■□□□□ 0.39
FAM49B-208ENST00000518344 MEP1AQ16819 746 aa17.47■□□□□ 0.39
FAM49B-208ENST00000518344 GGTA1PQ4G0N0 100 aa17.47■□□□□ 0.39
FAM49B-208ENST00000518344 H3F3CQ6NXT2 135 aa17.47■□□□□ 0.39
FAM49B-208ENST00000518344 LETMD1Q6P1Q0 360 aa17.47■□□□□ 0.39
FAM49B-208ENST00000518344 CYP20A1Q6UW02 462 aa17.47■□□□□ 0.39
FAM49B-208ENST00000518344 GPR180Q86V85 440 aa17.47■□□□□ 0.39
FAM49B-208ENST00000518344 CRLF3Q8IUI8 442 aa17.47■□□□□ 0.39
FAM49B-208ENST00000518344 C4orf33Q8N1A6 199 aa17.47■□□□□ 0.39
FAM49B-208ENST00000518344 ZCCHC7Q8N3Z6 543 aaKnown RBP17.47■□□□□ 0.39
FAM49B-208ENST00000518344 SLC5A8Q8N695 610 aa17.47■□□□□ 0.39
FAM49B-208ENST00000518344 NFAM1Q8NET5 270 aaPredicted RBP17.47■□□□□ 0.39
FAM49B-208ENST00000518344 ELP5Q8TE02 316 aa17.47■□□□□ 0.39
FAM49B-208ENST00000518344 SERPINI1Q99574 410 aa17.47■□□□□ 0.39
FAM49B-208ENST00000518344 PARD6BQ9BYG5 372 aa17.47■□□□□ 0.39
FAM49B-208ENST00000518344 ALOXE3Q9BYJ1 711 aa17.47■□□□□ 0.39
FAM49B-208ENST00000518344 CDCP1Q9H5V8 836 aa17.47■□□□□ 0.39
FAM49B-208ENST00000518344 GRID1Q9ULK0 1009 aa17.47■□□□□ 0.39
FAM49B-208ENST00000518344 CLDN16Q9Y5I7 305 aa17.47■□□□□ 0.39
FAM49B-208ENST00000518344 COPG1Q9Y678 874 aaKnown RBP17.47■□□□□ 0.39
FAM49B-208ENST00000518344 MAN1A2O60476 641 aa17.46■□□□□ 0.39
FAM49B-208ENST00000518344 EEDO75530 441 aaKnown RBP17.46■□□□□ 0.39
FAM49B-208ENST00000518344 NUDT17P0C025 328 aa17.46■□□□□ 0.39
FAM49B-208ENST00000518344 BSGP35613 385 aa17.46■□□□□ 0.39
FAM49B-208ENST00000518344 ST13P50502 369 aaKnown RBP17.46■□□□□ 0.39
FAM49B-208ENST00000518344 TNFSF10P50591 281 aa17.46■□□□□ 0.39
FAM49B-208ENST00000518344 ARFIP1P53367 373 aa17.46■□□□□ 0.39
FAM49B-208ENST00000518344 ID2Q02363 134 aa17.46■□□□□ 0.39
FAM49B-208ENST00000518344 CCDC153Q494R4 210 aa17.46■□□□□ 0.39
FAM49B-208ENST00000518344 ACER2Q5QJU3 275 aa17.46■□□□□ 0.39
FAM49B-208ENST00000518344 C10orf62Q5T681 223 aaPredicted RBP17.46■□□□□ 0.39
FAM49B-208ENST00000518344 BEST3Q8N1M1 668 aa17.46■□□□□ 0.39
FAM49B-208ENST00000518344 CCNYL1Q8N7R7 359 aa17.46■□□□□ 0.39
FAM49B-208ENST00000518344 CCDC63Q8NA47 563 aa17.46■□□□□ 0.39
FAM49B-208ENST00000518344 SELENOMQ8WWX9 145 aa17.46■□□□□ 0.39
FAM49B-208ENST00000518344 C12orf65Q9H3J6 166 aaKnown RBP17.46■□□□□ 0.39
FAM49B-208ENST00000518344 FARSBQ9NSD9 589 aaKnown RBP17.46■□□□□ 0.39
FAM49B-208ENST00000518344 ASF1BQ9NVP2 202 aa17.46■□□□□ 0.39
FAM49B-208ENST00000518344 MS4A12Q9NXJ0 267 aa17.46■□□□□ 0.39
FAM49B-208ENST00000518344 ABI3Q9P2A4 366 aa17.46■□□□□ 0.39
FAM49B-208ENST00000518344 TRPS1Q9UHF7 1281 aa17.46■□□□□ 0.39
FAM49B-208ENST00000518344 PHF11Q9UIL8 331 aa17.46■□□□□ 0.39
FAM49B-208ENST00000518344 SNX6Q9UNH7 406 aa17.46■□□□□ 0.39
FAM49B-208ENST00000518344 BLACEA4D250 179 aa17.45■□□□□ 0.38
FAM49B-208ENST00000518344 G3V2L1 256 aa17.45■□□□□ 0.38
FAM49B-208ENST00000518344 PDYNP01213 254 aa17.45■□□□□ 0.38
FAM49B-208ENST00000518344 GBAP04062 536 aa17.45■□□□□ 0.38
FAM49B-208ENST00000518344 PROCP04070 461 aa17.45■□□□□ 0.38
FAM49B-208ENST00000518344 TNNI3P19429 210 aa17.45■□□□□ 0.38
FAM49B-208ENST00000518344 TLX1P31314 330 aaPredicted RBP17.45■□□□□ 0.38
FAM49B-208ENST00000518344 FAM219BQ5XKK7 198 aa17.45■□□□□ 0.38
FAM49B-208ENST00000518344 C18orf63Q68DL7 685 aa17.45■□□□□ 0.38
FAM49B-208ENST00000518344 ZYG11AQ6WRX3 759 aa17.45■□□□□ 0.38
FAM49B-208ENST00000518344 GPRIN3Q6ZVF9 776 aa17.45■□□□□ 0.38
FAM49B-208ENST00000518344 RPS19BP1Q86WX3 136 aaKnown RBP17.45■□□□□ 0.38
FAM49B-208ENST00000518344 NUDT13Q86X67 352 aa17.45■□□□□ 0.38
FAM49B-208ENST00000518344 OR4N5Q8IXE1 308 aa17.45■□□□□ 0.38
FAM49B-208ENST00000518344 CDYL2Q8N8U2 506 aa17.45■□□□□ 0.38
FAM49B-208ENST00000518344 B3GNT7Q8NFL0 401 aa17.45■□□□□ 0.38
FAM49B-208ENST00000518344 MYRIPQ8NFW9 859 aa17.45■□□□□ 0.38
FAM49B-208ENST00000518344 SUN3Q8TAQ9 357 aa17.45■□□□□ 0.38
FAM49B-208ENST00000518344 CAVIN3Q969G5 261 aa17.45■□□□□ 0.38
FAM49B-208ENST00000518344 L3HYPDHQ96EM0 354 aa17.45■□□□□ 0.38
FAM49B-208ENST00000518344 NPAS2Q99743 824 aa17.45■□□□□ 0.38
FAM49B-208ENST00000518344 ZNF717Q9BY31 904 aaPredicted RBP17.45■□□□□ 0.38
FAM49B-208ENST00000518344 DEFB126Q9BYW3 111 aa17.45■□□□□ 0.38
FAM49B-208ENST00000518344 RPF2Q9H7B2 306 aaKnown RBP17.45■□□□□ 0.38
FAM49B-208ENST00000518344 DDX31Q9H8H2 851 aaKnown RBP17.45■□□□□ 0.38
FAM49B-208ENST00000518344 ADAP2Q9NPF8 381 aa17.45■□□□□ 0.38
FAM49B-208ENST00000518344 LYARQ9NX58 379 aaKnown RBP17.45■□□□□ 0.38
FAM49B-208ENST00000518344 ANKRD10Q9NXR5 420 aa17.45■□□□□ 0.38
FAM49B-208ENST00000518344 AHSPQ9NZD4 102 aa17.45■□□□□ 0.38
FAM49B-208ENST00000518344 ZNF225Q9UK10 706 aa17.45■□□□□ 0.38
FAM49B-208ENST00000518344 PPT2Q9UMR5 302 aa17.45■□□□□ 0.38
FAM49B-208ENST00000518344 SLC12A4Q9UP95 1085 aa17.45■□□□□ 0.38
FAM49B-208ENST00000518344 ATG4BQ9Y4P1 393 aa17.45■□□□□ 0.38
FAM49B-208ENST00000518344 CLCA3PQ9Y6N3 262 aa17.45■□□□□ 0.38
FAM49B-208ENST00000518344 GCN1Q92616 2671 aaKnown RBP17.44■□□□□ 0.38
FAM49B-208ENST00000518344 A0A0A6YYD5 115 aa17.44■□□□□ 0.38
FAM49B-208ENST00000518344 TRAV17A0A0B4J275 112 aa17.44■□□□□ 0.38
FAM49B-208ENST00000518344 OR5H15A6NDH6 313 aa17.44■□□□□ 0.38
FAM49B-208ENST00000518344 PLIN3O60664 434 aa17.44■□□□□ 0.38
FAM49B-208ENST00000518344 PRKRAO75569 313 aaKnown RBP17.44■□□□□ 0.38
FAM49B-208ENST00000518344 SEMA3DO95025 777 aa17.44■□□□□ 0.38
FAM49B-208ENST00000518344 MLYCDO95822 493 aa17.44■□□□□ 0.38
FAM49B-208ENST00000518344 KLK1P06870 262 aa17.44■□□□□ 0.38
FAM49B-208ENST00000518344 FAM58BPP0C7Q3 252 aa17.44■□□□□ 0.38
FAM49B-208ENST00000518344 BUD31P41223 144 aaPredicted RBP17.44■□□□□ 0.38
FAM49B-208ENST00000518344 HNRNPH2P55795 449 aaKnown RBP17.44■□□□□ 0.38
FAM49B-208ENST00000518344 TNFRSF17Q02223 184 aa17.44■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms