RNA–Protein interactions for RNA: ENST00000517713.5

COL13A1-210, Transcript of collagen type XIII alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL13A1, Length 2,007 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL13A1-210ENST00000517713 HIST1H1TP22492 207 aaPredicted RBP25.2■■□□□ 1.63
COL13A1-210ENST00000517713 DNAJA1P31689 397 aaKnown RBP25.2■■□□□ 1.63
COL13A1-210ENST00000517713 ITGA1P56199 1179 aa25.2■■□□□ 1.63
COL13A1-210ENST00000517713 DSTNP60981 165 aa25.2■■□□□ 1.63
COL13A1-210ENST00000517713 TUBA4AP68366 448 aa25.2■■□□□ 1.63
COL13A1-210ENST00000517713 KIR2DS3Q14952 304 aa25.2■■□□□ 1.63
COL13A1-210ENST00000517713 TJAP1Q5JTD0 557 aa25.2■■□□□ 1.63
COL13A1-210ENST00000517713 SRFBP1Q8NEF9 429 aaKnown RBP25.2■■□□□ 1.63
COL13A1-210ENST00000517713 ZNF555Q8NEP9 628 aa25.2■■□□□ 1.63
COL13A1-210ENST00000517713 ZFP28Q8NHY6 868 aa25.2■■□□□ 1.63
COL13A1-210ENST00000517713 GABARAPL1Q9H0R8 117 aa25.2■■□□□ 1.63
COL13A1-210ENST00000517713 EHD3Q9NZN3 535 aa25.2■■□□□ 1.63
COL13A1-210ENST00000517713 C3orf18Q9UK00 162 aa25.2■■□□□ 1.63
COL13A1-210ENST00000517713 LRP4O75096 1905 aa25.2■■□□□ 1.62
COL13A1-210ENST00000517713 OPN1SWP03999 348 aa25.2■■□□□ 1.62
COL13A1-210ENST00000517713 ATP5A1P25705 553 aaKnown RBP25.2■■□□□ 1.62
COL13A1-210ENST00000517713 IQCCQ4KMZ1 466 aa25.2■■□□□ 1.62
COL13A1-210ENST00000517713 CEP68Q76N32 757 aa25.2■■□□□ 1.62
COL13A1-210ENST00000517713 SYT13Q7L8C5 426 aa25.2■■□□□ 1.62
COL13A1-210ENST00000517713 DCP2Q8IU60 420 aaKnown RBP25.2■■□□□ 1.62
COL13A1-210ENST00000517713 ACOT4Q8N9L9 421 aa25.2■■□□□ 1.62
COL13A1-210ENST00000517713 AMBRA1Q9C0C7 1298 aa25.2■■□□□ 1.62
COL13A1-210ENST00000517713 SIRT3Q9NTG7 399 aaPredicted RBP25.2■■□□□ 1.62
COL13A1-210ENST00000517713 TMEFF2Q9UIK5 374 aaPredicted RBP25.2■■□□□ 1.62
COL13A1-210ENST00000517713 PADI2Q9Y2J8 665 aa25.2■■□□□ 1.62
COL13A1-210ENST00000517713 ASB4Q9Y574 426 aa25.2■■□□□ 1.62
COL13A1-210ENST00000517713 ORC6Q9Y5N6 252 aa25.2■■□□□ 1.62
COL13A1-210ENST00000517713 SNX11Q9Y5W9 270 aa25.2■■□□□ 1.62
COL13A1-210ENST00000517713 OR6B1O95007 311 aa25.19■■□□□ 1.62
COL13A1-210ENST00000517713 FPR1P21462 350 aa25.19■■□□□ 1.62
COL13A1-210ENST00000517713 CDH15P55291 814 aa25.19■■□□□ 1.62
COL13A1-210ENST00000517713 MLC1Q15049 377 aa25.19■■□□□ 1.62
COL13A1-210ENST00000517713 CCDC85BQ15834 202 aaPredicted RBP25.19■■□□□ 1.62
COL13A1-210ENST00000517713 SLC30A8Q8IWU4 369 aa25.19■■□□□ 1.62
COL13A1-210ENST00000517713 TRIM48Q8IWZ4 208 aa25.19■■□□□ 1.62
COL13A1-210ENST00000517713 GPBAR1Q8TDU6 330 aa25.19■■□□□ 1.62
COL13A1-210ENST00000517713 GAS2L1Q99501 681 aaPredicted RBP25.19■■□□□ 1.62
COL13A1-210ENST00000517713 APOBEC3BQ9UH17 382 aaKnown RBP25.19■■□□□ 1.62
COL13A1-210ENST00000517713 DMTF1Q9Y222 760 aa25.19■■□□□ 1.62
COL13A1-210ENST00000517713 ANGPT4Q9Y264 503 aa25.19■■□□□ 1.62
COL13A1-210ENST00000517713 SNRNP200O75643 2136 aaKnown RBP25.19■■□□□ 1.62
COL13A1-210ENST00000517713 M0QX08 132 aa25.19■■□□□ 1.62
COL13A1-210ENST00000517713 STXBP1P61764 594 aaKnown RBP25.19■■□□□ 1.62
COL13A1-210ENST00000517713 RPS15AP62244 130 aaKnown RBP25.19■■□□□ 1.62
COL13A1-210ENST00000517713 KCNAB2Q13303 367 aa25.19■■□□□ 1.62
COL13A1-210ENST00000517713 RFX4Q33E94 735 aa25.19■■□□□ 1.62
COL13A1-210ENST00000517713 LRIT3Q3SXY7 679 aa25.19■■□□□ 1.62
COL13A1-210ENST00000517713 SPDYE7PQ495Y7 208 aa25.19■■□□□ 1.62
COL13A1-210ENST00000517713 CRB2Q5IJ48 1285 aa25.19■■□□□ 1.62
COL13A1-210ENST00000517713 MRM1Q6IN84 353 aaKnown RBP25.19■■□□□ 1.62
COL13A1-210ENST00000517713 CEACAM20Q6UY09 585 aa25.19■■□□□ 1.62
COL13A1-210ENST00000517713 FLVCR1-AS1Q8TAF5 88 aa25.19■■□□□ 1.62
COL13A1-210ENST00000517713 TAMM41Q96BW9 452 aa25.19■■□□□ 1.62
COL13A1-210ENST00000517713 BARD1Q99728 777 aaKnown RBP25.19■■□□□ 1.62
COL13A1-210ENST00000517713 GPR174Q9BXC1 333 aa25.19■■□□□ 1.62
COL13A1-210ENST00000517713 YTHDF1Q9BYJ9 559 aaKnown RBP25.19■■□□□ 1.62
COL13A1-210ENST00000517713 TUBA8Q9NY65 449 aaPredicted RBP25.19■■□□□ 1.62
COL13A1-210ENST00000517713 WSB2Q9NYS7 404 aaPredicted RBP25.19■■□□□ 1.62
COL13A1-210ENST00000517713 SAMHD1Q9Y3Z3 626 aaKnown RBP25.19■■□□□ 1.62
COL13A1-210ENST00000517713 FANCMQ8IYD8 2048 aa25.18■■□□□ 1.62
COL13A1-210ENST00000517713 TRIM64A6NGJ6 449 aa25.18■■□□□ 1.62
COL13A1-210ENST00000517713 DPM1O60762 260 aa25.18■■□□□ 1.62
COL13A1-210ENST00000517713 GUCY1B2O75343 617 aa25.18■■□□□ 1.62
COL13A1-210ENST00000517713 RXRGP48443 463 aa25.18■■□□□ 1.62
COL13A1-210ENST00000517713 CDK9P50750 372 aaKnown RBP25.18■■□□□ 1.62
COL13A1-210ENST00000517713 RAD23AP54725 363 aa25.18■■□□□ 1.62
COL13A1-210ENST00000517713 GPR18Q14330 331 aa25.18■■□□□ 1.62
COL13A1-210ENST00000517713 CNPY1Q3B7I2 92 aa25.18■■□□□ 1.62
COL13A1-210ENST00000517713 C6orf120Q7Z4R8 191 aa25.18■■□□□ 1.62
COL13A1-210ENST00000517713 SPPL2AQ8TCT8 520 aa25.18■■□□□ 1.62
COL13A1-210ENST00000517713 LZICQ8WZA0 190 aa25.18■■□□□ 1.62
COL13A1-210ENST00000517713 NRBF2Q96F24 287 aa25.18■■□□□ 1.62
COL13A1-210ENST00000517713 OR2A14Q96R47 310 aa25.18■■□□□ 1.62
COL13A1-210ENST00000517713 TWSG1Q9GZX9 223 aa25.18■■□□□ 1.62
COL13A1-210ENST00000517713 TCEAL2Q9H3H9 227 aaPredicted RBP25.18■■□□□ 1.62
COL13A1-210ENST00000517713 REEP1Q9H902 201 aa25.18■■□□□ 1.62
COL13A1-210ENST00000517713 SLC35C2Q9NQQ7 365 aa25.18■■□□□ 1.62
COL13A1-210ENST00000517713 A0A087WXM4 84 aa25.17■■□□□ 1.62
COL13A1-210ENST00000517713 TSFMP43897 325 aaKnown RBP25.17■■□□□ 1.62
COL13A1-210ENST00000517713 LAPTM4AQ15012 233 aa25.17■■□□□ 1.62
COL13A1-210ENST00000517713 HORMAD2Q8N7B1 307 aa25.17■■□□□ 1.62
COL13A1-210ENST00000517713 FRMD1Q8N878 549 aa25.17■■□□□ 1.62
COL13A1-210ENST00000517713 PSMA8Q8TAA3 256 aa25.17■■□□□ 1.62
COL13A1-210ENST00000517713 TSC22D3Q99576 134 aa25.17■■□□□ 1.62
COL13A1-210ENST00000517713 C2orf42Q9NWW7 574 aa25.17■■□□□ 1.62
COL13A1-210ENST00000517713 A0A1W2PR48 441 aa25.17■■□□□ 1.62
COL13A1-210ENST00000517713 BMP10O95393 424 aa25.17■■□□□ 1.62
COL13A1-210ENST00000517713 VIPP01282 170 aa25.17■■□□□ 1.62
COL13A1-210ENST00000517713 IFNA14P01570 189 aa25.17■■□□□ 1.62
COL13A1-210ENST00000517713 PIGAP37287 484 aa25.17■■□□□ 1.62
COL13A1-210ENST00000517713 PCBP3P57721 371 aaKnown RBP25.17■■□□□ 1.62
COL13A1-210ENST00000517713 RAB8AP61006 207 aa25.17■■□□□ 1.62
COL13A1-210ENST00000517713 RPS26P62854 115 aaKnown RBP25.17■■□□□ 1.62
COL13A1-210ENST00000517713 SKIV2LQ15477 1246 aaKnown RBP25.17■■□□□ 1.62
COL13A1-210ENST00000517713 C8orf59Q8N0T1 100 aaPredicted RBP25.17■■□□□ 1.62
COL13A1-210ENST00000517713 ZFPM2Q8WW38 1151 aa25.17■■□□□ 1.62
COL13A1-210ENST00000517713 GSDMCQ9BYG8 508 aa25.17■■□□□ 1.62
COL13A1-210ENST00000517713 GLIPR2Q9H4G4 154 aa25.17■■□□□ 1.62
COL13A1-210ENST00000517713 LMAN1LQ9HAT1 526 aa25.17■■□□□ 1.62
COL13A1-210ENST00000517713 ATG4BQ9Y4P1 393 aa25.17■■□□□ 1.62
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms