RNA–Protein interactions for RNA: ENST00000516989.1

SCARNA6.1-201, small Cajal body-specific RNA 6, humanhuman

BASIC

Gene SCARNA6, Length 238 nt, Biotype scaRNA, Subcellular localisation Cytosol, Nucleolus, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA6.1-201ENST00000516989 ESX1Q8N693 406 aa5.51□□□□□ -1.53
SCARNA6.1-201ENST00000516989 METTL27Q8N6F8 245 aaPredicted RBP5.51□□□□□ -1.53
SCARNA6.1-201ENST00000516989 SLC38A9Q8NBW4 561 aa5.51□□□□□ -1.53
SCARNA6.1-201ENST00000516989 CAMKVQ8NCB2 501 aa5.51□□□□□ -1.53
SCARNA6.1-201ENST00000516989 ZNF248Q8NDW4 579 aa5.51□□□□□ -1.53
SCARNA6.1-201ENST00000516989 TRPV3Q8NET8 790 aa5.51□□□□□ -1.53
SCARNA6.1-201ENST00000516989 OR52B6Q8NGF0 335 aa5.51□□□□□ -1.53
SCARNA6.1-201ENST00000516989 SVIPQ8NHG7 77 aa5.51□□□□□ -1.53
SCARNA6.1-201ENST00000516989 PPP1R14CQ8TAE6 165 aa5.51□□□□□ -1.53
SCARNA6.1-201ENST00000516989 RDH11Q8TC12 318 aa5.51□□□□□ -1.53
SCARNA6.1-201ENST00000516989 ZCCHC14Q8WYQ9 949 aaKnown RBP5.51□□□□□ -1.53
SCARNA6.1-201ENST00000516989 UBE2E3Q969T4 207 aa5.51□□□□□ -1.53
SCARNA6.1-201ENST00000516989 ARL8AQ96BM9 186 aa5.51□□□□□ -1.53
SCARNA6.1-201ENST00000516989 MTFMTQ96DP5 389 aaKnown RBP5.51□□□□□ -1.53
SCARNA6.1-201ENST00000516989 PGM2Q96G03 612 aa5.51□□□□□ -1.53
SCARNA6.1-201ENST00000516989 EFCAB11Q9BUY7 163 aa5.51□□□□□ -1.53
SCARNA6.1-201ENST00000516989 ERVK-6Q9BXR3 956 aa5.51□□□□□ -1.53
SCARNA6.1-201ENST00000516989 SPRY4Q9C004 299 aa5.51□□□□□ -1.53
SCARNA6.1-201ENST00000516989 DRC3Q9H069 523 aa5.51□□□□□ -1.53
SCARNA6.1-201ENST00000516989 SPNS1Q9H2V7 528 aa5.51□□□□□ -1.53
SCARNA6.1-201ENST00000516989 EHD1Q9H4M9 534 aa5.51□□□□□ -1.53
SCARNA6.1-201ENST00000516989 NT5DC2Q9H857 520 aa5.51□□□□□ -1.53
SCARNA6.1-201ENST00000516989 SYNPO2LQ9H987 977 aa5.51□□□□□ -1.53
SCARNA6.1-201ENST00000516989 AKIRIN1Q9H9L7 192 aaPredicted RBP5.51□□□□□ -1.53
SCARNA6.1-201ENST00000516989 LHX9Q9NQ69 397 aa5.51□□□□□ -1.53
SCARNA6.1-201ENST00000516989 CUTCQ9NTM9 273 aa5.51□□□□□ -1.53
SCARNA6.1-201ENST00000516989 COPG2Q9UBF2 871 aa5.51□□□□□ -1.53
SCARNA6.1-201ENST00000516989 DHCR7Q9UBM7 475 aaKnown RBP5.51□□□□□ -1.53
SCARNA6.1-201ENST00000516989 FBLN5Q9UBX5 448 aa5.51□□□□□ -1.53
SCARNA6.1-201ENST00000516989 ZFP69BQ9UJL9 534 aa5.51□□□□□ -1.53
SCARNA6.1-201ENST00000516989 MID2Q9UJV3 735 aa5.51□□□□□ -1.53
SCARNA6.1-201ENST00000516989 PCTPQ9UKL6 214 aa5.51□□□□□ -1.53
SCARNA6.1-201ENST00000516989 ZNF490Q9ULM2 529 aaPredicted RBP5.51□□□□□ -1.53
SCARNA6.1-201ENST00000516989 RUVBL1Q9Y265 456 aaKnown RBP5.51□□□□□ -1.53
SCARNA6.1-201ENST00000516989 TMEM184BQ9Y519 407 aaPredicted RBP5.51□□□□□ -1.53
SCARNA6.1-201ENST00000516989 SPTBP11277 2137 aa5.51□□□□□ -1.53
SCARNA6.1-201ENST00000516989 DMXL1Q9Y485 3027 aa5.5□□□□□ -1.53
SCARNA6.1-201ENST00000516989 LOC101059948A0A1B0GTJ6 334 aa5.5□□□□□ -1.53
SCARNA6.1-201ENST00000516989 FITM1A5D6W6 292 aa5.5□□□□□ -1.53
SCARNA6.1-201ENST00000516989 TMEM8BA6NDV4 472 aa5.5□□□□□ -1.53
SCARNA6.1-201ENST00000516989 URADA6NGE7 173 aa5.5□□□□□ -1.53
SCARNA6.1-201ENST00000516989 FAM90A27PA6NNH2 459 aa5.5□□□□□ -1.53
SCARNA6.1-201ENST00000516989 H3BMH7 237 aa5.5□□□□□ -1.53
SCARNA6.1-201ENST00000516989 OR7A17O14581 309 aa5.5□□□□□ -1.53
SCARNA6.1-201ENST00000516989 P2RX6O15547 441 aa5.5□□□□□ -1.53
SCARNA6.1-201ENST00000516989 NDUFS4O43181 175 aa5.5□□□□□ -1.53
SCARNA6.1-201ENST00000516989 TYROBPO43914 113 aa5.5□□□□□ -1.53
SCARNA6.1-201ENST00000516989 SH3BGRLO75368 114 aa5.5□□□□□ -1.53
SCARNA6.1-201ENST00000516989 CRCPO75575 148 aa5.5□□□□□ -1.53
SCARNA6.1-201ENST00000516989 MLYCDO95822 493 aa5.5□□□□□ -1.53
SCARNA6.1-201ENST00000516989 OTCP00480 354 aa5.5□□□□□ -1.53
SCARNA6.1-201ENST00000516989 TGFB1P01137 390 aa5.5□□□□□ -1.53
SCARNA6.1-201ENST00000516989 RPS17P08708 135 aaKnown RBP5.5□□□□□ -1.53
SCARNA6.1-201ENST00000516989 ZGLP1P0C6A0 271 aa5.5□□□□□ -1.53
SCARNA6.1-201ENST00000516989 SLC35G6P0C7Q6 338 aa5.5□□□□□ -1.53
SCARNA6.1-201ENST00000516989 PIM1P11309 404 aaPredicted RBP5.5□□□□□ -1.53
SCARNA6.1-201ENST00000516989 ALDH3A1P30838 453 aa5.5□□□□□ -1.53
SCARNA6.1-201ENST00000516989 DLSTP36957 453 aa5.5□□□□□ -1.53
SCARNA6.1-201ENST00000516989 EIF2S3P41091 472 aaKnown RBP5.5□□□□□ -1.53
SCARNA6.1-201ENST00000516989 CASP2P42575 452 aa5.5□□□□□ -1.53
SCARNA6.1-201ENST00000516989 AVPR1BP47901 424 aa5.5□□□□□ -1.53
SCARNA6.1-201ENST00000516989 DNAJB13P59910 316 aa5.5□□□□□ -1.53
SCARNA6.1-201ENST00000516989 RAB8AP61006 207 aa5.5□□□□□ -1.53
SCARNA6.1-201ENST00000516989 DCDP81605 110 aaKnown RBP5.5□□□□□ -1.53
SCARNA6.1-201ENST00000516989 MVKQ03426 396 aa5.5□□□□□ -1.53
SCARNA6.1-201ENST00000516989 RGS1Q08116 209 aa5.5□□□□□ -1.53
SCARNA6.1-201ENST00000516989 ASPHQ12797 758 aa5.5□□□□□ -1.53
SCARNA6.1-201ENST00000516989 GPS2Q13227 327 aa5.5□□□□□ -1.53
SCARNA6.1-201ENST00000516989 IKZF1Q13422 519 aa5.5□□□□□ -1.53
SCARNA6.1-201ENST00000516989 DDX39BQ13838 428 aaKnown RBP5.5□□□□□ -1.53
SCARNA6.1-201ENST00000516989 MUM1Q2TAK8 710 aa5.5□□□□□ -1.53
SCARNA6.1-201ENST00000516989 PRTGQ2VWP7 1150 aa5.5□□□□□ -1.53
SCARNA6.1-201ENST00000516989 NKAIN1Q4KMZ8 207 aa5.5□□□□□ -1.53
SCARNA6.1-201ENST00000516989 SGO1Q5FBB7 561 aa5.5□□□□□ -1.53
SCARNA6.1-201ENST00000516989 TNFAIP8L3Q5GJ75 292 aa5.5□□□□□ -1.53
SCARNA6.1-201ENST00000516989 MANEAQ5SRI9 462 aa5.5□□□□□ -1.53
SCARNA6.1-201ENST00000516989 AGBL2Q5U5Z8 902 aa5.5□□□□□ -1.53
SCARNA6.1-201ENST00000516989 HHATQ5VTY9 493 aa5.5□□□□□ -1.53
SCARNA6.1-201ENST00000516989 GARNL3Q5VVW2 1013 aa5.5□□□□□ -1.53
SCARNA6.1-201ENST00000516989 LIPMQ5VYY2 423 aa5.5□□□□□ -1.53
SCARNA6.1-201ENST00000516989 LIPJQ5W064 366 aa5.5□□□□□ -1.53
SCARNA6.1-201ENST00000516989 TTC19Q6DKK2 380 aaPredicted RBP5.5□□□□□ -1.53
SCARNA6.1-201ENST00000516989 LCN10Q6JVE6 187 aa5.5□□□□□ -1.53
SCARNA6.1-201ENST00000516989 RHBDD2Q6NTF9 364 aa5.5□□□□□ -1.53
SCARNA6.1-201ENST00000516989 MED27Q6P2C8 311 aa5.5□□□□□ -1.53
SCARNA6.1-201ENST00000516989 VN1R4Q7Z5H5 301 aa5.5□□□□□ -1.53
SCARNA6.1-201ENST00000516989 VASH2Q86V25 355 aa5.5□□□□□ -1.53
SCARNA6.1-201ENST00000516989 PROSER1Q86XN7 944 aa5.5□□□□□ -1.53
SCARNA6.1-201ENST00000516989 DTX1Q86Y01 620 aa5.5□□□□□ -1.53
SCARNA6.1-201ENST00000516989 ZDHHC13Q8IUH4 622 aa5.5□□□□□ -1.53
SCARNA6.1-201ENST00000516989 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP5.5□□□□□ -1.53
SCARNA6.1-201ENST00000516989 DSELQ8IZU8 1212 aa5.5□□□□□ -1.53
SCARNA6.1-201ENST00000516989 ANKRD42Q8N9B4 389 aa5.5□□□□□ -1.53
SCARNA6.1-201ENST00000516989 ANKRD53Q8N9V6 530 aa5.5□□□□□ -1.53
SCARNA6.1-201ENST00000516989 TTLQ8NG68 377 aa5.5□□□□□ -1.53
SCARNA6.1-201ENST00000516989 OR4F6Q8NGB9 312 aa5.5□□□□□ -1.53
SCARNA6.1-201ENST00000516989 ZCCHC10Q8TBK6 192 aa5.5□□□□□ -1.53
SCARNA6.1-201ENST00000516989 METTL6Q8TCB7 284 aa5.5□□□□□ -1.53
SCARNA6.1-201ENST00000516989 MGARPQ8TDB4 240 aa5.5□□□□□ -1.53
SCARNA6.1-201ENST00000516989 ZNF483Q8TF39 744 aaPredicted RBP5.5□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 76.2 ms