RNA–Protein interactions for RNA: ENST00000516400.1

RNU1-48P-201, Transcript of RNA, U1 small nuclear 48, pseudogene, humanhuman

BASIC

Gene RNU1-48P, Length 162 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU1-48P-201ENST00000516400 TNXBP22105 4242 aa2.03□□□□□ -2.08
RNU1-48P-201ENST00000516400 KCNE1BA0A087WTH5 132 aa2.03□□□□□ -2.08
RNU1-48P-201ENST00000516400 C15orf38-AP3S2A0A0A6YYH1 394 aa2.03□□□□□ -2.08
RNU1-48P-201ENST00000516400 TRBV11-1A0A0K0K1C0 115 aa2.03□□□□□ -2.08
RNU1-48P-201ENST00000516400 LRRD1A4D1F6 860 aa2.03□□□□□ -2.08
RNU1-48P-201ENST00000516400 CCDC151A5D8V7 595 aa2.03□□□□□ -2.08
RNU1-48P-201ENST00000516400 KRT87PA6NCN2 255 aa2.03□□□□□ -2.08
RNU1-48P-201ENST00000516400 A8MVJ9 347 aa2.03□□□□□ -2.08
RNU1-48P-201ENST00000516400 CXorf49A8MYA2 514 aaPredicted RBP2.03□□□□□ -2.08
RNU1-48P-201ENST00000516400 H0YC42 278 aa2.03□□□□□ -2.08
RNU1-48P-201ENST00000516400 WWP2O00308 870 aa2.03□□□□□ -2.08
RNU1-48P-201ENST00000516400 PLOD2O00469 737 aa2.03□□□□□ -2.08
RNU1-48P-201ENST00000516400 CLOCKO15516 846 aa2.03□□□□□ -2.08
RNU1-48P-201ENST00000516400 PJA2O43164 708 aa2.03□□□□□ -2.08
RNU1-48P-201ENST00000516400 MED7O43513 233 aa2.03□□□□□ -2.08
RNU1-48P-201ENST00000516400 TNFRSF21O75509 655 aa2.03□□□□□ -2.08
RNU1-48P-201ENST00000516400 PRKRAO75569 313 aaKnown RBP2.03□□□□□ -2.08
RNU1-48P-201ENST00000516400 REM1O75628 298 aa2.03□□□□□ -2.08
RNU1-48P-201ENST00000516400 PGM3O95394 542 aa2.03□□□□□ -2.08
RNU1-48P-201ENST00000516400 AP2A1O95782 977 aa2.03□□□□□ -2.08
RNU1-48P-201ENST00000516400 ACTL6AO96019 429 aa2.03□□□□□ -2.08
RNU1-48P-201ENST00000516400 F13A1P00488 732 aa2.03□□□□□ -2.08
RNU1-48P-201ENST00000516400 IGHA1P01876 353 aa2.03□□□□□ -2.08
RNU1-48P-201ENST00000516400 UQCRHP07919 91 aa2.03□□□□□ -2.08
RNU1-48P-201ENST00000516400 CSF1P09603 554 aa2.03□□□□□ -2.08
RNU1-48P-201ENST00000516400 SMIM10L1P0DMW3 83 aa2.03□□□□□ -2.08
RNU1-48P-201ENST00000516400 ERGP11308 486 aa2.03□□□□□ -2.08
RNU1-48P-201ENST00000516400 CYP11B1P15538 503 aa2.03□□□□□ -2.08
RNU1-48P-201ENST00000516400 ZNF17P17021 662 aa2.03□□□□□ -2.08
RNU1-48P-201ENST00000516400 APEX1P27695 318 aaKnown RBP2.03□□□□□ -2.08
RNU1-48P-201ENST00000516400 PPP2R1BP30154 601 aa2.03□□□□□ -2.08
RNU1-48P-201ENST00000516400 GNA15P30679 374 aa2.03□□□□□ -2.08
RNU1-48P-201ENST00000516400 GRK3P35626 688 aa2.03□□□□□ -2.08
RNU1-48P-201ENST00000516400 PTGDSP41222 190 aa2.03□□□□□ -2.08
RNU1-48P-201ENST00000516400 STAT6P42226 847 aa2.03□□□□□ -2.08
RNU1-48P-201ENST00000516400 MMP13P45452 471 aa2.03□□□□□ -2.08
RNU1-48P-201ENST00000516400 RPL21P46778 160 aaKnown RBP2.03□□□□□ -2.08
RNU1-48P-201ENST00000516400 STARP49675 285 aa2.03□□□□□ -2.08
RNU1-48P-201ENST00000516400 GSK3AP49840 483 aa2.03□□□□□ -2.08
RNU1-48P-201ENST00000516400 CLCN2P51788 898 aa2.03□□□□□ -2.08
RNU1-48P-201ENST00000516400 SUCLG1P53597 346 aaKnown RBP2.03□□□□□ -2.08
RNU1-48P-201ENST00000516400 PMS1P54277 932 aaKnown RBP2.03□□□□□ -2.08
RNU1-48P-201ENST00000516400 GAS1P54826 345 aa2.03□□□□□ -2.08
RNU1-48P-201ENST00000516400 EIF3BP55884 814 aaKnown RBP2.03□□□□□ -2.08
RNU1-48P-201ENST00000516400 GSCP56915 257 aaPredicted RBP2.03□□□□□ -2.08
RNU1-48P-201ENST00000516400 B3GALT5-AS1P59052 145 aa2.03□□□□□ -2.08
RNU1-48P-201ENST00000516400 IRF9Q00978 393 aa2.03□□□□□ -2.08
RNU1-48P-201ENST00000516400 OGDHQ02218 1023 aa2.03□□□□□ -2.08
RNU1-48P-201ENST00000516400 PLOD1Q02809 727 aaPredicted RBP2.03□□□□□ -2.08
RNU1-48P-201ENST00000516400 SPOCK1Q08629 439 aa2.03□□□□□ -2.08
RNU1-48P-201ENST00000516400 SCGB2A2Q13296 93 aa2.03□□□□□ -2.08
RNU1-48P-201ENST00000516400 BECN1Q14457 450 aa2.03□□□□□ -2.08
RNU1-48P-201ENST00000516400 PTPRCAPQ14761 206 aa2.03□□□□□ -2.08
RNU1-48P-201ENST00000516400 MORF4L2Q15014 288 aa2.03□□□□□ -2.08
RNU1-48P-201ENST00000516400 TERF2Q15554 542 aa2.03□□□□□ -2.08
RNU1-48P-201ENST00000516400 CDO1Q16878 200 aa2.03□□□□□ -2.08
RNU1-48P-201ENST00000516400 CTU2Q2VPK5 515 aaKnown RBP2.03□□□□□ -2.08
RNU1-48P-201ENST00000516400 CCSMST1Q4G0I0 132 aa2.03□□□□□ -2.08
RNU1-48P-201ENST00000516400 KLHL22Q53GT1 634 aa2.03□□□□□ -2.08
RNU1-48P-201ENST00000516400 C4orf48Q5BLP8 95 aa2.03□□□□□ -2.08
RNU1-48P-201ENST00000516400 ZNF628Q5EBL2 1059 aa2.03□□□□□ -2.08
RNU1-48P-201ENST00000516400 PIGGQ5H8A4 983 aa2.03□□□□□ -2.08
RNU1-48P-201ENST00000516400 ERMARDQ5T6L9 678 aa2.03□□□□□ -2.08
RNU1-48P-201ENST00000516400 MARC1Q5VT66 337 aa2.03□□□□□ -2.08
RNU1-48P-201ENST00000516400 SLC22A10Q63ZE4 541 aa2.03□□□□□ -2.08
RNU1-48P-201ENST00000516400 SAXO2Q658L1 398 aa2.03□□□□□ -2.08
RNU1-48P-201ENST00000516400 TMEM214Q6NUQ4 689 aaKnown RBP2.03□□□□□ -2.08
RNU1-48P-201ENST00000516400 GJB7Q6PEY0 223 aa2.03□□□□□ -2.08
RNU1-48P-201ENST00000516400 TRIM65Q6PJ69 517 aa2.03□□□□□ -2.08
RNU1-48P-201ENST00000516400 C17orf107Q6ZR85 190 aa2.03□□□□□ -2.08
RNU1-48P-201ENST00000516400 QSOX2Q6ZRP7 698 aa2.03□□□□□ -2.08
RNU1-48P-201ENST00000516400 RFX8Q6ZV50 586 aa2.03□□□□□ -2.08
RNU1-48P-201ENST00000516400 MEPCEQ7L2J0 689 aaKnown RBP2.03□□□□□ -2.08
RNU1-48P-201ENST00000516400 POLNQ7Z5Q5 900 aa2.03□□□□□ -2.08
RNU1-48P-201ENST00000516400 TBC1D1Q86TI0 1168 aaPredicted RBP2.03□□□□□ -2.08
RNU1-48P-201ENST00000516400 GLCCI1Q86VQ1 547 aa2.03□□□□□ -2.08
RNU1-48P-201ENST00000516400 WFDC8Q8IUA0 241 aa2.03□□□□□ -2.08
RNU1-48P-201ENST00000516400 VRK3Q8IV63 474 aa2.03□□□□□ -2.08
RNU1-48P-201ENST00000516400 LRRC56Q8IYG6 542 aaPredicted RBP2.03□□□□□ -2.08
RNU1-48P-201ENST00000516400 NDUFAF2Q8N183 169 aa2.03□□□□□ -2.08
RNU1-48P-201ENST00000516400 ZNF786Q8N393 782 aa2.03□□□□□ -2.08
RNU1-48P-201ENST00000516400 PPM1KQ8N3J5 372 aa2.03□□□□□ -2.08
RNU1-48P-201ENST00000516400 C2orf73Q8N5S3 287 aaPredicted RBP2.03□□□□□ -2.08
RNU1-48P-201ENST00000516400 PDILTQ8N807 584 aa2.03□□□□□ -2.08
RNU1-48P-201ENST00000516400 OR5T3Q8NGG3 340 aa2.03□□□□□ -2.08
RNU1-48P-201ENST00000516400 OR6P1Q8NGX9 317 aa2.03□□□□□ -2.08
RNU1-48P-201ENST00000516400 CLDND2Q8NHS1 167 aa2.03□□□□□ -2.08
RNU1-48P-201ENST00000516400 MAGEC3Q8TD91 643 aa2.03□□□□□ -2.08
RNU1-48P-201ENST00000516400 WIPF2Q8TF74 440 aaPredicted RBP2.03□□□□□ -2.08
RNU1-48P-201ENST00000516400 FAM172AQ8WUF8 416 aa2.03□□□□□ -2.08
RNU1-48P-201ENST00000516400 SGCDQ92629 289 aa2.03□□□□□ -2.08
RNU1-48P-201ENST00000516400 DACT3Q96B18 629 aaPredicted RBP2.03□□□□□ -2.08
RNU1-48P-201ENST00000516400 S100PBPQ96BU1 408 aa2.03□□□□□ -2.08
RNU1-48P-201ENST00000516400 SMIM10Q96HG1 83 aa2.03□□□□□ -2.08
RNU1-48P-201ENST00000516400 ITCHQ96J02 903 aa2.03□□□□□ -2.08
RNU1-48P-201ENST00000516400 TEKT5Q96M29 485 aa2.03□□□□□ -2.08
RNU1-48P-201ENST00000516400 IL17FQ96PD4 163 aa2.03□□□□□ -2.08
RNU1-48P-201ENST00000516400 CSPG4P5Q96PW8 444 aa2.03□□□□□ -2.08
RNU1-48P-201ENST00000516400 OR1F2PQ96R84 312 aa2.03□□□□□ -2.08
RNU1-48P-201ENST00000516400 SNX18Q96RF0 628 aa2.03□□□□□ -2.08
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms