RNA–Protein interactions for RNA: ENST00000515708.5

TSPAN17-209, Transcript of tetraspanin 17, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TSPAN17, Length 2,361 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN17-209ENST00000515708 ASPNQ9BXN1 380 aa16.06■□□□□ 0.16
TSPAN17-209ENST00000515708 SLC25A19Q9HC21 320 aa16.06■□□□□ 0.16
TSPAN17-209ENST00000515708 EXOSC4Q9NPD3 245 aaKnown RBP16.06■□□□□ 0.16
TSPAN17-209ENST00000515708 DYRK4Q9NR20 520 aa16.06■□□□□ 0.16
TSPAN17-209ENST00000515708 NPAP1Q9NZP6 1156 aa16.06■□□□□ 0.16
TSPAN17-209ENST00000515708 WBP11Q9Y2W2 641 aaKnown RBP16.06■□□□□ 0.16
TSPAN17-209ENST00000515708 FFAR1O14842 300 aa16.05■□□□□ 0.16
TSPAN17-209ENST00000515708 RGS13O14921 159 aa16.05■□□□□ 0.16
TSPAN17-209ENST00000515708 SLITRK5O94991 958 aa16.05■□□□□ 0.16
TSPAN17-209ENST00000515708 KRT75O95678 551 aa16.05■□□□□ 0.16
TSPAN17-209ENST00000515708 KRT8P05787 483 aa16.05■□□□□ 0.16
TSPAN17-209ENST00000515708 NPPBP16860 134 aa16.05■□□□□ 0.16
TSPAN17-209ENST00000515708 GJA1P17302 382 aa16.05■□□□□ 0.16
TSPAN17-209ENST00000515708 CA8P35219 290 aa16.05■□□□□ 0.16
TSPAN17-209ENST00000515708 RPS19P39019 145 aaKnown RBP16.05■□□□□ 0.16
TSPAN17-209ENST00000515708 HTR3AP46098 478 aa16.05■□□□□ 0.16
TSPAN17-209ENST00000515708 RHAGQ02094 409 aa16.05■□□□□ 0.16
TSPAN17-209ENST00000515708 TSTA3Q13630 321 aaPredicted RBP16.05■□□□□ 0.16
TSPAN17-209ENST00000515708 PUM1Q14671 1186 aaKnown RBP eCLIP16.05■□□□□ 0.16
TSPAN17-209ENST00000515708 DEFB115Q30KQ5 88 aa16.05■□□□□ 0.16
TSPAN17-209ENST00000515708 LEXMQ3ZCV2 418 aa16.05■□□□□ 0.16
TSPAN17-209ENST00000515708 MMAAQ8IVH4 418 aaKnown RBP16.05■□□□□ 0.16
TSPAN17-209ENST00000515708 LAS2Q8IYD9 372 aa16.05■□□□□ 0.16
TSPAN17-209ENST00000515708 OR6F1Q8NGZ6 308 aa16.05■□□□□ 0.16
TSPAN17-209ENST00000515708 TMCO6Q96DC7 493 aa16.05■□□□□ 0.16
TSPAN17-209ENST00000515708 CNPPD1Q9BV87 410 aa16.05■□□□□ 0.16
TSPAN17-209ENST00000515708 BARHL1Q9BZE3 327 aa16.05■□□□□ 0.16
TSPAN17-209ENST00000515708 FZD3Q9NPG1 666 aa16.05■□□□□ 0.16
TSPAN17-209ENST00000515708 C11orf16Q9NQ32 467 aa16.05■□□□□ 0.16
TSPAN17-209ENST00000515708 LSM2Q9Y333 95 aaKnown RBP16.05■□□□□ 0.16
TSPAN17-209ENST00000515708 NINQ8N4C6 2090 aa16.05■□□□□ 0.16
TSPAN17-209ENST00000515708 TRBV4-1A0A0J9YWV2 114 aa16.05■□□□□ 0.16
TSPAN17-209ENST00000515708 A0A1W2PRB8 838 aa16.05■□□□□ 0.16
TSPAN17-209ENST00000515708 PIPSLA2A3N6 862 aa16.05■□□□□ 0.16
TSPAN17-209ENST00000515708 H3BM21 787 aa16.05■□□□□ 0.16
TSPAN17-209ENST00000515708 SOX3P41225 446 aa16.05■□□□□ 0.16
TSPAN17-209ENST00000515708 LIM2P55344 173 aa16.05■□□□□ 0.16
TSPAN17-209ENST00000515708 NRARPQ7Z6K4 114 aa16.05■□□□□ 0.16
TSPAN17-209ENST00000515708 KRT73Q86Y46 540 aa16.05■□□□□ 0.16
TSPAN17-209ENST00000515708 UBQLNLQ8IYU4 475 aa16.05■□□□□ 0.16
TSPAN17-209ENST00000515708 OR8H2Q8N162 312 aa16.05■□□□□ 0.16
TSPAN17-209ENST00000515708 MYLIPQ8WY64 445 aa16.05■□□□□ 0.16
TSPAN17-209ENST00000515708 WDR34Q96EX3 536 aa16.05■□□□□ 0.16
TSPAN17-209ENST00000515708 EFCAB11Q9BUY7 163 aa16.05■□□□□ 0.16
TSPAN17-209ENST00000515708 WASH3PC4AMC7 463 aa16.04■□□□□ 0.16
TSPAN17-209ENST00000515708 TLR4O00206 839 aa16.04■□□□□ 0.16
TSPAN17-209ENST00000515708 RGS5O15539 181 aa16.04■□□□□ 0.16
TSPAN17-209ENST00000515708 PBLDP30039 288 aaPredicted RBP16.04■□□□□ 0.16
TSPAN17-209ENST00000515708 ZNF284Q2VY69 593 aa16.04■□□□□ 0.16
TSPAN17-209ENST00000515708 NXNL2Q5VZ03 156 aa16.04■□□□□ 0.16
TSPAN17-209ENST00000515708 ZNF544Q6NX49 715 aa16.04■□□□□ 0.16
TSPAN17-209ENST00000515708 TMEM25Q86YD3 366 aa16.04■□□□□ 0.16
TSPAN17-209ENST00000515708 LMNTD1Q8N9Z9 388 aa16.04■□□□□ 0.16
TSPAN17-209ENST00000515708 VANGL1Q8TAA9 524 aaPredicted RBP16.04■□□□□ 0.16
TSPAN17-209ENST00000515708 APOBEC4Q8WW27 367 aaKnown RBP16.04■□□□□ 0.16
TSPAN17-209ENST00000515708 GLYATL1Q969I3 302 aa16.04■□□□□ 0.16
TSPAN17-209ENST00000515708 TPK1Q9H3S4 243 aa16.04■□□□□ 0.16
TSPAN17-209ENST00000515708 GULP1Q9UBP9 304 aa16.04■□□□□ 0.16
TSPAN17-209ENST00000515708 CLEC2DQ9UHP7 191 aa16.04■□□□□ 0.16
TSPAN17-209ENST00000515708 ZNF221Q9UK13 617 aa16.04■□□□□ 0.16
TSPAN17-209ENST00000515708 TRAV19A0A0A6YYK7 116 aa16.04■□□□□ 0.16
TSPAN17-209ENST00000515708 LEFTY1O75610 366 aa16.04■□□□□ 0.16
TSPAN17-209ENST00000515708 C1orf105O95561 183 aa16.04■□□□□ 0.16
TSPAN17-209ENST00000515708 ADAP00813 363 aa16.04■□□□□ 0.16
TSPAN17-209ENST00000515708 KLK1P06870 262 aa16.04■□□□□ 0.16
TSPAN17-209ENST00000515708 CKMT1AP12532 417 aa16.04■□□□□ 0.16
TSPAN17-209ENST00000515708 CSTF2P33240 577 aaKnown RBP eCLIP16.04■□□□□ 0.16
TSPAN17-209ENST00000515708 FEN1P39748 380 aaKnown RBP16.04■□□□□ 0.16
TSPAN17-209ENST00000515708 MAPK9P45984 424 aa16.04■□□□□ 0.16
TSPAN17-209ENST00000515708 RECQLP46063 649 aaPredicted RBP16.04■□□□□ 0.16
TSPAN17-209ENST00000515708 CCL23P55773 120 aa16.04■□□□□ 0.16
TSPAN17-209ENST00000515708 ARPC4P59998 168 aa16.04■□□□□ 0.16
TSPAN17-209ENST00000515708 DSTNP60981 165 aa16.04■□□□□ 0.16
TSPAN17-209ENST00000515708 TMEM115Q12893 351 aaPredicted RBP16.04■□□□□ 0.16
TSPAN17-209ENST00000515708 C6orf183Q5T699 404 aa16.04■□□□□ 0.16
TSPAN17-209ENST00000515708 PSD4Q8NDX1 1056 aa16.04■□□□□ 0.16
TSPAN17-209ENST00000515708 SETD6Q8TBK2 473 aa16.04■□□□□ 0.16
TSPAN17-209ENST00000515708 MTERF3Q96E29 417 aa16.04■□□□□ 0.16
TSPAN17-209ENST00000515708 SPNS1Q9H2V7 528 aa16.04■□□□□ 0.16
TSPAN17-209ENST00000515708 NFKBIL1Q9UBC1 381 aaPredicted RBP16.04■□□□□ 0.16
TSPAN17-209ENST00000515708 REV1Q9UBZ9 1251 aa16.04■□□□□ 0.16
TSPAN17-209ENST00000515708 COL4A6Q14031 1691 aa16.04■□□□□ 0.16
TSPAN17-209ENST00000515708 PRRC2BQ5JSZ5 2229 aaKnown RBP16.03■□□□□ 0.16
TSPAN17-209ENST00000515708 A0A1W2PRU2 124 aa16.03■□□□□ 0.16
TSPAN17-209ENST00000515708 CAPN5O15484 640 aaPredicted RBP16.03■□□□□ 0.16
TSPAN17-209ENST00000515708 CSO75390 466 aaKnown RBP16.03■□□□□ 0.16
TSPAN17-209ENST00000515708 C1GALT1C1LP0DN25 315 aa16.03■□□□□ 0.16
TSPAN17-209ENST00000515708 OSMP13725 252 aa16.03■□□□□ 0.16
TSPAN17-209ENST00000515708 ENDOUP21128 410 aaKnown RBP16.03■□□□□ 0.16
TSPAN17-209ENST00000515708 ATN1P54259 1190 aaPredicted RBP16.03■□□□□ 0.16
TSPAN17-209ENST00000515708 SNRPGP62308 76 aaKnown RBP16.03■□□□□ 0.16
TSPAN17-209ENST00000515708 MEF2AQ02078 507 aaPredicted RBP16.03■□□□□ 0.16
TSPAN17-209ENST00000515708 GPR50Q13585 617 aa16.03■□□□□ 0.16
TSPAN17-209ENST00000515708 SMUG1Q53HV7 270 aa16.03■□□□□ 0.16
TSPAN17-209ENST00000515708 REEP3Q6NUK4 255 aa16.03■□□□□ 0.16
TSPAN17-209ENST00000515708 TMEM220Q6QAJ8 160 aa16.03■□□□□ 0.16
TSPAN17-209ENST00000515708 UNC5DQ6UXZ4 953 aa16.03■□□□□ 0.16
TSPAN17-209ENST00000515708 SLC30A8Q8IWU4 369 aa16.03■□□□□ 0.16
TSPAN17-209ENST00000515708 MMP21Q8N119 569 aa16.03■□□□□ 0.16
TSPAN17-209ENST00000515708 SLC39A11Q8N1S5 342 aa16.03■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms