RNA–Protein interactions for RNA: ENST00000514402.1

MATR3-223, Transcript of matrin 3, human

TSL 2

Gene MATR3, Length 556 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MATR3-223	ENST00000514402	SPATA19	Q7Z5L4	167 aa		3.07	□□□□□ -1.92
MATR3-223	ENST00000514402	NLRP14	Q86W24	1093 aa		3.07	□□□□□ -1.92
MATR3-223	ENST00000514402	ANKRD46	Q86W74	232 aa		3.07	□□□□□ -1.92
MATR3-223	ENST00000514402	CARNMT1	Q8N4J0	409 aa		3.07	□□□□□ -1.92
MATR3-223	ENST00000514402	RNF149	Q8NC42	400 aa		3.07	□□□□□ -1.92
MATR3-223	ENST00000514402	OR13C5	Q8NGS8	318 aa		3.07	□□□□□ -1.92
MATR3-223	ENST00000514402	SETD6	Q8TBK2	473 aa		3.07	□□□□□ -1.92
MATR3-223	ENST00000514402	KIAA1524	Q8TCG1	905 aa		3.07	□□□□□ -1.92
MATR3-223	ENST00000514402	AFAP1L1	Q8TED9	768 aa		3.07	□□□□□ -1.92
MATR3-223	ENST00000514402	ST6GALNAC6	Q969X2	333 aa		3.07	□□□□□ -1.92
MATR3-223	ENST00000514402	B3GALT6	Q96L58	329 aa		3.07	□□□□□ -1.92
MATR3-223	ENST00000514402	HSD17B14	Q9BPX1	270 aa		3.07	□□□□□ -1.92
MATR3-223	ENST00000514402	ADPGK	Q9BRR6	497 aa		3.07	□□□□□ -1.92
MATR3-223	ENST00000514402	PLEKHA3	Q9HB20	300 aa		3.07	□□□□□ -1.92
MATR3-223	ENST00000514402	S100A14	Q9HCY8	104 aa		3.07	□□□□□ -1.92
MATR3-223	ENST00000514402	CUTC	Q9NTM9	273 aa		3.07	□□□□□ -1.92
MATR3-223	ENST00000514402	ANAPC11	Q9NYG5	84 aa		3.07	□□□□□ -1.92
MATR3-223	ENST00000514402	NIP7	Q9Y221	180 aa	Known RBP eCLIP	3.07	□□□□□ -1.92
MATR3-223	ENST00000514402	ZNF256	Q9Y2P7	627 aa	Predicted RBP	3.07	□□□□□ -1.92
MATR3-223	ENST00000514402	HBS1L	Q9Y450	684 aa	Known RBP	3.07	□□□□□ -1.92
MATR3-223	ENST00000514402	CPQ	Q9Y646	472 aa		3.07	□□□□□ -1.92
MATR3-223	ENST00000514402	TRIM64	A6NGJ6	449 aa		3.06	□□□□□ -1.92
MATR3-223	ENST00000514402	TRIM64B	A6NI03	449 aa		3.06	□□□□□ -1.92
MATR3-223	ENST00000514402	FOXI3	A8MTJ6	420 aa	Predicted RBP	3.06	□□□□□ -1.92
MATR3-223	ENST00000514402	CCS	O14618	274 aa		3.06	□□□□□ -1.92
MATR3-223	ENST00000514402	ANKRD34C	P0C6C1	535 aa		3.06	□□□□□ -1.92
MATR3-223	ENST00000514402	PPP2R1A	P30153	589 aa		3.06	□□□□□ -1.92
MATR3-223	ENST00000514402	OR3A1	P47881	315 aa		3.06	□□□□□ -1.92
MATR3-223	ENST00000514402	NPBWR1	P48145	328 aa		3.06	□□□□□ -1.92
MATR3-223	ENST00000514402	CEACAM7	Q14002	265 aa		3.06	□□□□□ -1.92
MATR3-223	ENST00000514402	GON4L	Q3T8J9	2241 aa		3.06	□□□□□ -1.92
MATR3-223	ENST00000514402	REP15	Q6BDI9	236 aa		3.06	□□□□□ -1.92
MATR3-223	ENST00000514402	ZNF444	Q8N0Y2	327 aa	Predicted RBP	3.06	□□□□□ -1.92
MATR3-223	ENST00000514402	CKAP2	Q8WWK9	683 aa		3.06	□□□□□ -1.92
MATR3-223	ENST00000514402	SMPDL3A	Q92484	453 aa		3.06	□□□□□ -1.92
MATR3-223	ENST00000514402	SLC35C1	Q96A29	364 aa		3.06	□□□□□ -1.92
MATR3-223	ENST00000514402	BPIFA2	Q96DR5	249 aa		3.06	□□□□□ -1.92
MATR3-223	ENST00000514402	SIPA1	Q96FS4	1042 aa		3.06	□□□□□ -1.92
MATR3-223	ENST00000514402	MRPL9	Q9BYD2	267 aa	Known RBP	3.06	□□□□□ -1.92
MATR3-223	ENST00000514402	GRPEL1	Q9HAV7	217 aa		3.06	□□□□□ -1.92
MATR3-223	ENST00000514402	ARGLU1	Q9NWB6	273 aa	Predicted RBP	3.06	□□□□□ -1.92
MATR3-223	ENST00000514402	SLC6A5	Q9Y345	797 aa		3.06	□□□□□ -1.92
MATR3-223	ENST00000514402	RALGAPA1	Q6GYQ0	2036 aa		3.05	□□□□□ -1.92
MATR3-223	ENST00000514402	LOC390937	A0A1W2PQ73	354 aa		3.05	□□□□□ -1.92
MATR3-223	ENST00000514402	E2F3	O00716	465 aa		3.05	□□□□□ -1.92
MATR3-223	ENST00000514402	VENTX	O95231	258 aa		3.05	□□□□□ -1.92
MATR3-223	ENST00000514402	LY6G6D	O95868	133 aa		3.05	□□□□□ -1.92
MATR3-223	ENST00000514402	LBP	P18428	481 aa		3.05	□□□□□ -1.92
MATR3-223	ENST00000514402	ACKR3	P25106	362 aa		3.05	□□□□□ -1.92
MATR3-223	ENST00000514402	TNNT3	P45378	269 aa	Predicted RBP	3.05	□□□□□ -1.92
MATR3-223	ENST00000514402	WASHC5	Q12768	1159 aa		3.05	□□□□□ -1.92
MATR3-223	ENST00000514402	ABR	Q12979	859 aa		3.05	□□□□□ -1.92
MATR3-223	ENST00000514402	SCARB2	Q14108	478 aa		3.05	□□□□□ -1.92
MATR3-223	ENST00000514402	PCK2	Q16822	640 aa		3.05	□□□□□ -1.92
MATR3-223	ENST00000514402	LCE3A	Q5TA76	89 aa		3.05	□□□□□ -1.92
MATR3-223	ENST00000514402	IQCA1	Q86XH1	822 aa		3.05	□□□□□ -1.92
MATR3-223	ENST00000514402	PARP8	Q8N3A8	854 aa		3.05	□□□□□ -1.92
MATR3-223	ENST00000514402	ZNF781	Q8N8C0	355 aa		3.05	□□□□□ -1.92
MATR3-223	ENST00000514402	FLVCR1-AS1	Q8TAF5	88 aa		3.05	□□□□□ -1.92
MATR3-223	ENST00000514402	DNASE1L2	Q92874	299 aa		3.05	□□□□□ -1.92
MATR3-223	ENST00000514402	SNX21	Q969T3	373 aa		3.05	□□□□□ -1.92
MATR3-223	ENST00000514402	SPATA17	Q96L03	361 aa		3.05	□□□□□ -1.92
MATR3-223	ENST00000514402	JAKMIP1	Q96N16	626 aa	Known RBP	3.05	□□□□□ -1.92
MATR3-223	ENST00000514402	ATG101	Q9BSB4	218 aa		3.05	□□□□□ -1.92
MATR3-223	ENST00000514402	ZWILCH	Q9H900	591 aa		3.05	□□□□□ -1.92
MATR3-223	ENST00000514402	DBNDD1	Q9H9R9	158 aa		3.05	□□□□□ -1.92
MATR3-223	ENST00000514402	ABCB10	Q9NRK6	738 aa		3.05	□□□□□ -1.92
MATR3-223	ENST00000514402	GPR173	Q9NS66	373 aa		3.05	□□□□□ -1.92
MATR3-223	ENST00000514402	SLCO1C1	Q9NYB5	712 aa		3.05	□□□□□ -1.92
MATR3-223	ENST00000514402	MIS18A	Q9NYP9	233 aa		3.05	□□□□□ -1.92
MATR3-223	ENST00000514402	SENP1	Q9P0U3	644 aa		3.05	□□□□□ -1.92
MATR3-223	ENST00000514402	CLIP2	Q9UDT6	1046 aa		3.05	□□□□□ -1.92
MATR3-223	ENST00000514402	FER1L5	A0AVI2	2057 aa		3.05	□□□□□ -1.92
MATR3-223	ENST00000514402	PRRC2A	P48634	2157 aa	Known RBP	3.04	□□□□□ -1.92
MATR3-223	ENST00000514402	UMODL1	Q5DID0	1318 aa		3.04	□□□□□ -1.92
MATR3-223	ENST00000514402	GTPBP10	A4D1E9	387 aa	Known RBP	3.04	□□□□□ -1.92
MATR3-223	ENST00000514402	ANKDD1B	A6NHY2	528 aa		3.04	□□□□□ -1.92
MATR3-223	ENST00000514402	KBTBD13	C9JR72	458 aa		3.04	□□□□□ -1.92
MATR3-223	ENST00000514402	IFIT3	O14879	490 aa	Known RBP	3.04	□□□□□ -1.92
MATR3-223	ENST00000514402	HAT1	O14929	419 aa		3.04	□□□□□ -1.92
MATR3-223	ENST00000514402	ACSL4	O60488	711 aa		3.04	□□□□□ -1.92
MATR3-223	ENST00000514402	ZFY	P08048	801 aa	Predicted RBP	3.04	□□□□□ -1.92
MATR3-223	ENST00000514402	SKIL	P12757	684 aa		3.04	□□□□□ -1.92
MATR3-223	ENST00000514402	SOAT1	P35610	550 aa		3.04	□□□□□ -1.92
MATR3-223	ENST00000514402	PEX3	P56589	373 aa		3.04	□□□□□ -1.92
MATR3-223	ENST00000514402	TFCP2	Q12800	502 aa		3.04	□□□□□ -1.92
MATR3-223	ENST00000514402	DNAJC21	Q5F1R6	531 aa	Known RBP	3.04	□□□□□ -1.92
MATR3-223	ENST00000514402	PLBD1	Q6P4A8	553 aa		3.04	□□□□□ -1.92
MATR3-223	ENST00000514402	RAPH1	Q70E73	1250 aa		3.04	□□□□□ -1.92
MATR3-223	ENST00000514402	TDH	Q8IZJ6	230 aa		3.04	□□□□□ -1.92
MATR3-223	ENST00000514402	MSANTD4	Q8NCY6	345 aa		3.04	□□□□□ -1.92
MATR3-223	ENST00000514402	GOT1L1	Q8NHS2	421 aa	Predicted RBP	3.04	□□□□□ -1.92
MATR3-223	ENST00000514402	SGF29	Q96ES7	293 aa		3.04	□□□□□ -1.92
MATR3-223	ENST00000514402	MTIF3	Q9H2K0	278 aa	Known RBP	3.04	□□□□□ -1.92
MATR3-223	ENST00000514402	MED17	Q9NVC6	651 aa		3.04	□□□□□ -1.92
MATR3-223	ENST00000514402	CHCHD3	Q9NX63	227 aa	Known RBP	3.04	□□□□□ -1.92
MATR3-223	ENST00000514402	NYAP2	Q9P242	653 aa		3.04	□□□□□ -1.92
MATR3-223	ENST00000514402	GPRASP1	Q5JY77	1395 aa		3.03	□□□□□ -1.92
MATR3-223	ENST00000514402	ARHGEF37	A1IGU5	675 aa		3.03	□□□□□ -1.92
MATR3-223	ENST00000514402	YDJC	A8MPS7	323 aa		3.03	□□□□□ -1.92

Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms