RNA–Protein interactions for RNA: ENST00000513643.5

RNF4-221, Transcript of ring finger protein 4, humanhuman

TSL 3

Gene RNF4, Length 516 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-221ENST00000513643 ACER2Q5QJU3 275 aa9.08□□□□□ -0.96
RNF4-221ENST00000513643 MFSD4BQ5TF39 518 aa9.08□□□□□ -0.96
RNF4-221ENST00000513643 IRAK1BP1Q5VVH5 260 aa9.08□□□□□ -0.96
RNF4-221ENST00000513643 ZNF324BQ6AW86 544 aaPredicted RBP9.08□□□□□ -0.96
RNF4-221ENST00000513643 ZYG11AQ6WRX3 759 aa9.08□□□□□ -0.96
RNF4-221ENST00000513643 LINC00696Q6ZRV3 163 aa9.08□□□□□ -0.96
RNF4-221ENST00000513643 MILR1Q7Z6M3 343 aa9.08□□□□□ -0.96
RNF4-221ENST00000513643 SLC22A9Q8IVM8 553 aa9.08□□□□□ -0.96
RNF4-221ENST00000513643 SIRT6Q8N6T7 355 aa9.08□□□□□ -0.96
RNF4-221ENST00000513643 GALNT11Q8NCW6 608 aa9.08□□□□□ -0.96
RNF4-221ENST00000513643 C7orf57Q8NEG2 295 aa9.08□□□□□ -0.96
RNF4-221ENST00000513643 DNAJB14Q8TBM8 379 aa9.08□□□□□ -0.96
RNF4-221ENST00000513643 CPT1CQ8TCG5 803 aa9.08□□□□□ -0.96
RNF4-221ENST00000513643 PTPMT1Q8WUK0 201 aaPredicted RBP9.08□□□□□ -0.96
RNF4-221ENST00000513643 UBLCP1Q8WVY7 318 aaPredicted RBP9.08□□□□□ -0.96
RNF4-221ENST00000513643 C19orf60Q96EN9 201 aa9.08□□□□□ -0.96
RNF4-221ENST00000513643 C11orf24Q96F05 449 aaPredicted RBP9.08□□□□□ -0.96
RNF4-221ENST00000513643 ZNF382Q96SR6 550 aa9.08□□□□□ -0.96
RNF4-221ENST00000513643 SORBS1Q9BX66 1292 aaKnown RBP9.08□□□□□ -0.96
RNF4-221ENST00000513643 PARD6BQ9BYG5 372 aa9.08□□□□□ -0.96
RNF4-221ENST00000513643 ROPN1BQ9BZX4 212 aaPredicted RBP9.08□□□□□ -0.96
RNF4-221ENST00000513643 GSTO2Q9H4Y5 243 aa9.08□□□□□ -0.96
RNF4-221ENST00000513643 EPS8L2Q9H6S3 715 aa9.08□□□□□ -0.96
RNF4-221ENST00000513643 ROPN1Q9HAT0 212 aaPredicted RBP9.08□□□□□ -0.96
RNF4-221ENST00000513643 BRF2Q9HAW0 419 aa9.08□□□□□ -0.96
RNF4-221ENST00000513643 SEMA4BQ9NPR2 832 aaPredicted RBP9.08□□□□□ -0.96
RNF4-221ENST00000513643 PRTFDC1Q9NRG1 225 aa9.08□□□□□ -0.96
RNF4-221ENST00000513643 MS4A12Q9NXJ0 267 aa9.08□□□□□ -0.96
RNF4-221ENST00000513643 STMN3Q9NZ72 180 aa9.08□□□□□ -0.96
RNF4-221ENST00000513643 TRPS1Q9UHF7 1281 aa9.08□□□□□ -0.96
RNF4-221ENST00000513643 NTNG1Q9Y2I2 539 aa9.08□□□□□ -0.96
RNF4-221ENST00000513643 ATG4BQ9Y4P1 393 aa9.08□□□□□ -0.96
RNF4-221ENST00000513643 PCDHGB6Q9Y5F9 930 aa9.08□□□□□ -0.96
RNF4-221ENST00000513643 DOPEY1Q5JWR5 2465 aa9.08□□□□□ -0.96
RNF4-221ENST00000513643 ESPL1Q14674 2120 aa9.07□□□□□ -0.96
RNF4-221ENST00000513643 A0A1W2PR48 441 aa9.07□□□□□ -0.96
RNF4-221ENST00000513643 UBFD1O14562 309 aaKnown RBP9.07□□□□□ -0.96
RNF4-221ENST00000513643 GLRA3O75311 464 aa9.07□□□□□ -0.96
RNF4-221ENST00000513643 KRT4P19013 534 aa9.07□□□□□ -0.96
RNF4-221ENST00000513643 TAC1P20366 129 aa9.07□□□□□ -0.96
RNF4-221ENST00000513643 TPP2P29144 1249 aaPredicted RBP9.07□□□□□ -0.96
RNF4-221ENST00000513643 PPP2R1BP30154 601 aa9.07□□□□□ -0.96
RNF4-221ENST00000513643 TRHRP34981 398 aaPredicted RBP9.07□□□□□ -0.96
RNF4-221ENST00000513643 SLCO1A2P46721 670 aa9.07□□□□□ -0.96
RNF4-221ENST00000513643 HNRNPH2P55795 449 aaKnown RBP9.07□□□□□ -0.96
RNF4-221ENST00000513643 KCNC4Q03721 635 aa9.07□□□□□ -0.96
RNF4-221ENST00000513643 ZNF33BQ06732 778 aa9.07□□□□□ -0.96
RNF4-221ENST00000513643 ACTN3Q08043 901 aaPredicted RBP9.07□□□□□ -0.96
RNF4-221ENST00000513643 GALNT1Q10472 559 aaPredicted RBP9.07□□□□□ -0.96
RNF4-221ENST00000513643 SLAMF1Q13291 335 aa9.07□□□□□ -0.96
RNF4-221ENST00000513643 RCN2Q14257 317 aa9.07□□□□□ -0.96
RNF4-221ENST00000513643 ZNF169Q14929 603 aaPredicted RBP9.07□□□□□ -0.96
RNF4-221ENST00000513643 ERCC6LQ2NKX8 1250 aa9.07□□□□□ -0.96
RNF4-221ENST00000513643 CCDC153Q494R4 210 aa9.07□□□□□ -0.96
RNF4-221ENST00000513643 FAM219BQ5XKK7 198 aa9.07□□□□□ -0.96
RNF4-221ENST00000513643 TRABD2AQ86V40 505 aa9.07□□□□□ -0.96
RNF4-221ENST00000513643 GPR180Q86V85 440 aa9.07□□□□□ -0.96
RNF4-221ENST00000513643 ZNF227Q86WZ6 799 aa9.07□□□□□ -0.96
RNF4-221ENST00000513643 CRLF3Q8IUI8 442 aa9.07□□□□□ -0.96
RNF4-221ENST00000513643 IQCKQ8N0W5 287 aa9.07□□□□□ -0.96
RNF4-221ENST00000513643 METTL4Q8N3J2 472 aa9.07□□□□□ -0.96
RNF4-221ENST00000513643 RIBC1Q8N443 379 aaPredicted RBP9.07□□□□□ -0.96
RNF4-221ENST00000513643 BANPQ8N9N5 519 aa9.07□□□□□ -0.96
RNF4-221ENST00000513643 FAM47BQ8NA70 645 aa9.07□□□□□ -0.96
RNF4-221ENST00000513643 MDS2Q8NDY4 140 aa9.07□□□□□ -0.96
RNF4-221ENST00000513643 B3GNT7Q8NFL0 401 aa9.07□□□□□ -0.96
RNF4-221ENST00000513643 OR2W6PQ8NHA6 318 aa9.07□□□□□ -0.96
RNF4-221ENST00000513643 TRPC4APQ8TEL6 797 aa9.07□□□□□ -0.96
RNF4-221ENST00000513643 TANKQ92844 425 aa9.07□□□□□ -0.96
RNF4-221ENST00000513643 ZNF354BQ96LW1 612 aa9.07□□□□□ -0.96
RNF4-221ENST00000513643 SERPINI1Q99574 410 aa9.07□□□□□ -0.96
RNF4-221ENST00000513643 ALOXE3Q9BYJ1 711 aa9.07□□□□□ -0.96
RNF4-221ENST00000513643 ADAP2Q9NPF8 381 aa9.07□□□□□ -0.96
RNF4-221ENST00000513643 SLAMF7Q9NQ25 335 aa9.07□□□□□ -0.96
RNF4-221ENST00000513643 FARSBQ9NSD9 589 aaKnown RBP9.07□□□□□ -0.96
RNF4-221ENST00000513643 SIRT5Q9NXA8 310 aa9.07□□□□□ -0.96
RNF4-221ENST00000513643 PLA2G3Q9NZ20 509 aa9.07□□□□□ -0.96
RNF4-221ENST00000513643 ADAM29Q9UKF5 820 aa9.07□□□□□ -0.96
RNF4-221ENST00000513643 GRID1Q9ULK0 1009 aa9.07□□□□□ -0.96
RNF4-221ENST00000513643 MRPS33Q9Y291 106 aaKnown RBP9.07□□□□□ -0.96
RNF4-221ENST00000513643 CPAMD8Q8IZJ3 1885 aa9.06□□□□□ -0.96
RNF4-221ENST00000513643 TRAV17A0A0B4J275 112 aa9.06□□□□□ -0.96
RNF4-221ENST00000513643 OR5H15A6NDH6 313 aa9.06□□□□□ -0.96
RNF4-221ENST00000513643 WASHC1A8K0Z3 465 aa9.06□□□□□ -0.96
RNF4-221ENST00000513643 TCP11X1B4DZS4 312 aa9.06□□□□□ -0.96
RNF4-221ENST00000513643 FGF17O60258 216 aa9.06□□□□□ -0.96
RNF4-221ENST00000513643 SH3BGRLO75368 114 aa9.06□□□□□ -0.96
RNF4-221ENST00000513643 SUPT7LO94864 414 aa9.06□□□□□ -0.96
RNF4-221ENST00000513643 OR4F21O95013 312 aa9.06□□□□□ -0.96
RNF4-221ENST00000513643 CBX6O95503 412 aa9.06□□□□□ -0.96
RNF4-221ENST00000513643 ESRRBO95718 433 aa9.06□□□□□ -0.96
RNF4-221ENST00000513643 MLYCDO95822 493 aa9.06□□□□□ -0.96
RNF4-221ENST00000513643 DDAH2O95865 285 aa9.06□□□□□ -0.96
RNF4-221ENST00000513643 PDYNP01213 254 aa9.06□□□□□ -0.96
RNF4-221ENST00000513643 IGKV3-11P04433 115 aa9.06□□□□□ -0.96
RNF4-221ENST00000513643 HSD3B1P14060 373 aa9.06□□□□□ -0.96
RNF4-221ENST00000513643 TSPAN8P19075 237 aa9.06□□□□□ -0.96
RNF4-221ENST00000513643 HSD3B2P26439 372 aa9.06□□□□□ -0.96
RNF4-221ENST00000513643 CD96P40200 585 aa9.06□□□□□ -0.96
RNF4-221ENST00000513643 SSR2P43308 183 aa9.06□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 431.1 ms